登録情報 データベース : PDB / ID : 3jyu 構造の表示 ダウンロードとリンクタイトル Crystal structure of the N-terminal domains of the ubiquitin specific peptidase 4 (USP4) 要素Ubiquitin carboxyl-terminal hydrolase 詳細 キーワード HYDROLASE / Domain in ubiquitin-specific peptidases (DUSP) / proto-oncogene / Ubiquitin-fold / Ubl / protease / thioesterase / Thiol protease / Ubl conjugation pathway / Structural Genomics / Structural Genomics Consortium / SGC機能・相同性 機能・相同性情報分子機能 ドメイン・相同性 構成要素
adenosine receptor binding / TNFR1-induced proapoptotic signaling / TNFR1-induced NF-kappa-B signaling pathway / Regulation of TNFR1 signaling / Ub-specific processing proteases / protein localization to cell surface / protein deubiquitination / spliceosomal tri-snRNP complex assembly / negative regulation of protein ubiquitination / regulation of protein stability ... adenosine receptor binding / TNFR1-induced proapoptotic signaling / TNFR1-induced NF-kappa-B signaling pathway / Regulation of TNFR1 signaling / Ub-specific processing proteases / protein localization to cell surface / protein deubiquitination / spliceosomal tri-snRNP complex assembly / negative regulation of protein ubiquitination / regulation of protein stability / ubiquitin-dependent protein catabolic process / ubiquitinyl hydrolase 1 / cysteine-type deubiquitinase activity / identical protein binding / nucleus / metal ion binding / plasma membrane / cytosol / cytoplasm 類似検索 - 分子機能 DUSP-like / DUSP-like / Ubiquitin-like domain, USP-type / Ubiquitin-like domain / Peptidase C19, ubiquitin-specific peptidase, DUSP domain / DUSP-like superfamily / DUSP domain / DUSP domain profile. / Domain in ubiquitin-specific proteases. / Ubiquitin specific protease (USP) domain signature 2. ... DUSP-like / DUSP-like / Ubiquitin-like domain, USP-type / Ubiquitin-like domain / Peptidase C19, ubiquitin-specific peptidase, DUSP domain / DUSP-like superfamily / DUSP domain / DUSP domain profile. / Domain in ubiquitin-specific proteases. / Ubiquitin specific protease (USP) domain signature 2. / Ubiquitin specific protease (USP) domain signature 1. / Ubiquitin specific protease, conserved site / Peptidase C19, ubiquitin carboxyl-terminal hydrolase / Ubiquitin carboxyl-terminal hydrolase / Ubiquitin specific protease domain / Ubiquitin specific protease (USP) domain profile. / Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 / Papain-like cysteine peptidase superfamily / Ubiquitin-like (UB roll) / Roll / 2-Layer Sandwich / Alpha Beta 類似検索 - ドメイン・相同性 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE / Ubiquitin carboxyl-terminal hydrolase 4 / Ubiquitin carboxyl-terminal hydrolase 類似検索 - 構成要素生物種 Mus musculus (ハツカネズミ)手法 X線回折 / シンクロトロン / molecular replacementSAD / 解像度 : 2.37 Å 詳細データ登録者 Bacik, J.P. / Avvakumov, G. / Walker, J.R. / Xue, S. / Arrowsmith, C.H. / Edwards, A.M. / Bochkarev, A. / Dhe-Paganon, S. / Structural Genomics Consortium (SGC) 引用ジャーナル : To be Published タイトル : Crystal structure of the N-terminal domains of the ubiquitin specific peptidase 4 (USP4)著者 : Bacik, J.P. / Avvakumov, G. / Walker, J.R. / Xue, S. / Dhe-Paganon, S. 履歴 登録 2009年9月22日 登録サイト : RCSB / 処理サイト : RCSB改定 1.0 2009年10月20日 Provider : repository / タイプ : Initial release改定 1.1 2011年7月13日 Group : Version format compliance改定 1.2 2017年11月1日 Group : Refinement description / カテゴリ : software改定 1.3 2023年9月6日 Group : Data collection / Database references ... Data collection / Database references / Derived calculations / Refinement description / Structure summary カテゴリ : chem_comp / chem_comp_atom ... chem_comp / chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model / struct_conn / struct_ref_seq_dif / struct_site Item : _chem_comp.pdbx_synonyms / _database_2.pdbx_DOI ... _chem_comp.pdbx_synonyms / _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _struct_conn.pdbx_leaving_atom_flag / _struct_ref_seq_dif.details / _struct_site.pdbx_auth_asym_id / _struct_site.pdbx_auth_comp_id / _struct_site.pdbx_auth_seq_id 改定 1.4 2023年11月22日 Group : Data collection / カテゴリ : chem_comp_atom / chem_comp_bond / Item : _chem_comp_atom.atom_id / _chem_comp_bond.atom_id_2
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