登録情報 | データベース: PDB / ID: 3hon |
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タイトル | Crystal Structure of Human Collagen XVIII Trimerization Domain (cubic form) |
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要素 | Collagen alpha-1(XVIII) chain |
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キーワード | PROTEIN BINDING / collagen triple helix / trimerization domain / collagen XVIII / multiplexin / Alternative promoter usage / Alternative splicing / Cell adhesion / Collagen / Disulfide bond / Extracellular matrix / Glycoprotein / Hydroxylation / Metal-binding / Polymorphism / Secreted / Zinc |
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機能・相同性 | 機能・相同性情報
Collagen chain trimerization / response to hydrostatic pressure / extracellular matrix structural constituent conferring tensile strength / notochord development / Collagen biosynthesis and modifying enzymes / Laminin interactions / endothelial cell morphogenesis / collagen trimer / collagen fibril organization / Assembly of collagen fibrils and other multimeric structures ...Collagen chain trimerization / response to hydrostatic pressure / extracellular matrix structural constituent conferring tensile strength / notochord development / Collagen biosynthesis and modifying enzymes / Laminin interactions / endothelial cell morphogenesis / collagen trimer / collagen fibril organization / Assembly of collagen fibrils and other multimeric structures / Activation of Matrix Metalloproteinases / Collagen degradation / basement membrane / Integrin cell surface interactions / visual perception / skeletal system development / animal organ morphogenesis / angiogenesis / collagen-containing extracellular matrix / cell adhesion / response to xenobiotic stimulus / negative regulation of cell population proliferation / endoplasmic reticulum lumen / extracellular space / extracellular exosome / extracellular region / metal ion binding類似検索 - 分子機能 YefM-like fold - #70 / Domain of unknown function DUF959, collagen XVIII, N-terminal / Collagen alpha-1(XVIII) chain, frizzled domain / Collagen type XV/XVIII, trimerization domain / Domain of Unknown Function (DUF959) / Collagen trimerization domain / Collagenase NC10/endostatin / Collagenase NC10 and Endostatin / : / YefM-like fold ...YefM-like fold - #70 / Domain of unknown function DUF959, collagen XVIII, N-terminal / Collagen alpha-1(XVIII) chain, frizzled domain / Collagen type XV/XVIII, trimerization domain / Domain of Unknown Function (DUF959) / Collagen trimerization domain / Collagenase NC10/endostatin / Collagenase NC10 and Endostatin / : / YefM-like fold / Thrombospondin N-terminal -like domains. / Frizzled / : / Frizzled domain / Frizzled cysteine-rich domain superfamily / Fz domain / Frizzled (fz) domain profile. / Collagen triple helix repeat / Collagen triple helix repeat (20 copies) / C-type lectin-like/link domain superfamily / C-type lectin fold / Concanavalin A-like lectin/glucanase domain superfamily / 3-Layer(aba) Sandwich / Alpha Beta類似検索 - ドメイン・相同性 |
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生物種 | Homo sapiens (ヒト) |
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手法 | X線回折 / シンクロトロン / 分子置換 / 解像度: 3 Å |
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データ登録者 | Boudko, S.P. / Bachinger, H.P. |
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引用 | ジャーナル: J.Mol.Biol. / 年: 2009 タイトル: Crystal structure of human collagen XVIII trimerization domain: A novel collagen trimerization Fold. 著者: Boudko, S.P. / Sasaki, T. / Engel, J. / Lerch, T.F. / Nix, J. / Chapman, M.S. / Bachinger, H.P. |
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履歴 | 登録 | 2009年6月2日 | 登録サイト: RCSB / 処理サイト: RCSB |
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改定 1.0 | 2009年8月11日 | Provider: repository / タイプ: Initial release |
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改定 1.1 | 2011年7月13日 | Group: Version format compliance |
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改定 1.2 | 2017年11月1日 | Group: Refinement description / カテゴリ: software / Item: _software.name |
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改定 1.3 | 2018年3月14日 | Group: Database references / カテゴリ: struct_ref_seq_dif / Item: _struct_ref_seq_dif.details |
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改定 1.4 | 2024年2月21日 | Group: Data collection / Database references カテゴリ: chem_comp_atom / chem_comp_bond ...chem_comp_atom / chem_comp_bond / database_2 / struct_ref_seq_dif Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _struct_ref_seq_dif.details |
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