- PDB-3g7s: Crystal structure of a long-chain-fatty-acid-CoA ligase (FadD1) f... -
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基本情報
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データベース: PDB / ID: 3g7s
タイトル
Crystal structure of a long-chain-fatty-acid-CoA ligase (FadD1) from Archaeoglobus fulgidus
要素
Long-chain-fatty-acid--CoA ligase (FadD-1)
キーワード
LIGASE / Protein Structure Initiative / PSI-II / NYSGXRC / 11193j / Structural Genomics / New York Structural GenomiX Research Consortium / New York SGX Research Center for Structural Genomics
解像度: 2.15→2.28 Å / 冗長度: 2.6 % / Rmerge(I) obs: 0.471 / Mean I/σ(I) obs: 2 / Num. unique all: 3778 / % possible all: 62.3
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解析
ソフトウェア
名称
バージョン
分類
CNS
1.1
精密化
CBASS
データ収集
HKL-2000
データ削減
HKL-2000
データスケーリング
SHELXD
位相決定
SHARP
位相決定
ARP/wARP
モデル構築
精密化
構造決定の手法: 単波長異常分散 / 解像度: 2.15→45.57 Å / Rfactor Rfree error: 0.005 / Data cutoff high absF: 92794.05 / Data cutoff low absF: 0 / Isotropic thermal model: RESTRAINED / 交差検証法: THROUGHOUT / 立体化学のターゲット値: Engh & Huber 詳細: 1. Residues listed as missing in Remark 465 are due to lack of electron density. Residues with missing atoms listed in Remark 470 are due to lack of electron density for side chains and ...詳細: 1. Residues listed as missing in Remark 465 are due to lack of electron density. Residues with missing atoms listed in Remark 470 are due to lack of electron density for side chains and modeled as alanines. 2. There is one outlier, the residue Cys 399 of chain A, which has L configuration. This residue fits electron density well.