登録情報 | データベース: PDB / ID: 3ex8 |
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タイトル | Complex structure of bacillus subtilis RibG reduction mechanism in riboflavin biosynthesis |
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要素 | Riboflavin biosynthesis protein ribD |
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キーワード | HYDROLASE / OXIDOREDUCTASE / alpha/beta/alpha / deaminase domain / reductase domain / Metal-binding / Multifunctional enzyme / NADP / Riboflavin biosynthesis / Zinc |
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機能・相同性 | 機能・相同性情報
5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase / diaminohydroxyphosphoribosylaminopyrimidine deaminase activity / 5-amino-6-(5-phosphoribosylamino)uracil reductase activity / riboflavin biosynthetic process / NADP binding / zinc ion binding類似検索 - 分子機能 Riboflavin biosynthesis protein RibD / Riboflavin-specific deaminase, C-terminal / Bacterial bifunctional deaminase-reductase, C-terminal / RibD C-terminal domain / Cytidine and deoxycytidylate deaminase zinc-binding region / Cytidine Deaminase, domain 2 / Cytidine Deaminase; domain 2 / APOBEC/CMP deaminase, zinc-binding / Cytidine and deoxycytidylate deaminases zinc-binding region signature. / Cytidine and deoxycytidylate deaminase domain ...Riboflavin biosynthesis protein RibD / Riboflavin-specific deaminase, C-terminal / Bacterial bifunctional deaminase-reductase, C-terminal / RibD C-terminal domain / Cytidine and deoxycytidylate deaminase zinc-binding region / Cytidine Deaminase, domain 2 / Cytidine Deaminase; domain 2 / APOBEC/CMP deaminase, zinc-binding / Cytidine and deoxycytidylate deaminases zinc-binding region signature. / Cytidine and deoxycytidylate deaminase domain / Cytidine and deoxycytidylate deaminases domain profile. / Cytidine deaminase-like / Dihydrofolate Reductase, subunit A / Dihydrofolate Reductase, subunit A / Dihydrofolate reductase-like domain superfamily / 3-Layer(aba) Sandwich / Alpha Beta類似検索 - ドメイン・相同性 Chem-AIF / Riboflavin biosynthesis protein RibD類似検索 - 構成要素 |
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生物種 | Bacillus subtilis (枯草菌) |
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手法 | X線回折 / シンクロトロン / 分子置換 / 解像度: 2.56 Å |
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データ登録者 | Chen, S.C. / Lin, Y.H. / Yu, H.C. / Liaw, S.H. |
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引用 | #1: ジャーナル: J.Biol.Chem. / 年: 2006タイトル: Crystal structure of a bifunctional deaminase and reductase from Bacillus subtilis involved in riboflavin biosynthesis. 著者: Chen, S.C. / Chang, Y.C. / Lin, C.H. / Liaw, S.H. |
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履歴 | 登録 | 2008年10月16日 | 登録サイト: RCSB / 処理サイト: PDBJ |
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改定 1.0 | 2008年11月4日 | Provider: repository / タイプ: Initial release |
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改定 1.1 | 2011年7月13日 | Group: Version format compliance |
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改定 1.2 | 2023年11月1日 | Group: Data collection / Database references ...Data collection / Database references / Derived calculations / Refinement description カテゴリ: chem_comp_atom / chem_comp_bond ...chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model / struct_ref_seq_dif / struct_site Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession ..._database_2.pdbx_DOI / _database_2.pdbx_database_accession / _struct_ref_seq_dif.details / _struct_site.pdbx_auth_asym_id / _struct_site.pdbx_auth_comp_id / _struct_site.pdbx_auth_seq_id |
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