Entry | Database: PDB / ID: 3edf |
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Title | Structural base for cyclodextrin hydrolysis |
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Components | Cyclomaltodextrinase |
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Keywords | HYDROLASE / alpha-cyclodextrin complex / Glycosidase |
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Function / homology | Function and homology information
Cyclomaltodextrinase, N-terminal / Cyclo-malto-dextrinase, C-terminal / Cyclomaltodextrinase, N-terminal / Cyclo-malto-dextrinase C-terminal domain / Alpha amylase, catalytic domain / Glycosyl hydrolase, family 13, catalytic domain / Alpha-amylase domain / Golgi alpha-mannosidase II / Glycosyl hydrolase, all-beta / Glycosidases ...Cyclomaltodextrinase, N-terminal / Cyclo-malto-dextrinase, C-terminal / Cyclomaltodextrinase, N-terminal / Cyclo-malto-dextrinase C-terminal domain / Alpha amylase, catalytic domain / Glycosyl hydrolase, family 13, catalytic domain / Alpha-amylase domain / Golgi alpha-mannosidase II / Glycosyl hydrolase, all-beta / Glycosidases / Immunoglobulin E-set / Glycoside hydrolase superfamily / Immunoglobulins / TIM Barrel / Alpha-Beta Barrel / Immunoglobulin-like fold / Immunoglobulin-like / Sandwich / Mainly Beta / Alpha BetaSimilarity search - Domain/homology |
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Biological species | Flavobacterium sp. 92 (bacteria) |
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Method | X-RAY DIFFRACTION / SYNCHROTRON / Resolution: 1.65 Å |
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Authors | Buedenbender, S. / Schulz, G.E. |
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Citation | Journal: J.Mol.Biol. / Year: 2009 Title: Structural base for enzymatic cyclodextrin hydrolysis Authors: Buedenbender, S. / Schulz, G.E. |
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History | Deposition | Sep 3, 2008 | Deposition site: RCSB / Processing site: PDBJ |
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Revision 1.0 | Mar 3, 2009 | Provider: repository / Type: Initial release |
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Revision 1.1 | Jul 13, 2011 | Group: Non-polymer description / Version format compliance |
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Revision 2.0 | Jul 29, 2020 | Group: Advisory / Atomic model ...Advisory / Atomic model / Data collection / Derived calculations / Non-polymer description / Structure summary Category: atom_site / chem_comp ...atom_site / chem_comp / database_PDB_caveat / entity / entity_name_com / pdbx_branch_scheme / pdbx_chem_comp_identifier / pdbx_entity_branch / pdbx_entity_branch_descriptor / pdbx_entity_branch_link / pdbx_entity_branch_list / pdbx_entity_nonpoly / pdbx_molecule_features / pdbx_nonpoly_scheme / pdbx_struct_conn_angle / pdbx_validate_chiral / pdbx_validate_close_contact / struct_asym / struct_conn / struct_conn_type / struct_site / struct_site_gen Item: _atom_site.B_iso_or_equiv / _atom_site.Cartn_x ..._atom_site.B_iso_or_equiv / _atom_site.Cartn_x / _atom_site.Cartn_y / _atom_site.Cartn_z / _atom_site.auth_asym_id / _atom_site.auth_atom_id / _atom_site.auth_comp_id / _atom_site.auth_seq_id / _atom_site.label_alt_id / _atom_site.label_asym_id / _atom_site.label_atom_id / _atom_site.label_comp_id / _atom_site.label_entity_id / _atom_site.occupancy / _atom_site.type_symbol / _chem_comp.formula / _chem_comp.formula_weight / _chem_comp.id / _chem_comp.mon_nstd_flag / _chem_comp.name / _chem_comp.type / _entity.formula_weight / _entity.pdbx_description / _entity.pdbx_number_of_molecules / _entity.src_method / _entity.type / _pdbx_struct_conn_angle.ptnr1_auth_seq_id / _pdbx_struct_conn_angle.ptnr2_label_asym_id / _pdbx_struct_conn_angle.ptnr3_auth_seq_id / _pdbx_struct_conn_angle.value / _pdbx_validate_chiral.auth_asym_id / _pdbx_validate_chiral.auth_atom_id / _pdbx_validate_chiral.auth_comp_id / _pdbx_validate_chiral.auth_seq_id / _pdbx_validate_close_contact.auth_asym_id_2 / _pdbx_validate_close_contact.auth_atom_id_2 / _pdbx_validate_close_contact.auth_comp_id_2 / _pdbx_validate_close_contact.auth_seq_id_2 / _struct_asym.entity_id Description: Carbohydrate remediation / Provider: repository / Type: Remediation |
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Revision 2.1 | Nov 10, 2021 | Group: Database references / Structure summary / Category: chem_comp / database_2 / struct_ref_seq_dif Item: _chem_comp.pdbx_synonyms / _database_2.pdbx_DOI ..._chem_comp.pdbx_synonyms / _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _struct_ref_seq_dif.details |
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Revision 2.2 | May 29, 2024 | Group: Data collection / Category: chem_comp_atom / chem_comp_bond |
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