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Open data
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Basic information
Entry | Database: PDB / ID: 365d | ||||||||||||||||||
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Title | STRUCTURAL BASIS FOR G C RECOGNITION IN THE DNA MINOR GROOVE | ||||||||||||||||||
![]() | DNA (5'-D(*![]() DNA / B-DNA / DOUBLE HELIX / MODIFIED | Function / homology | IMIDAZOLE-PYRROLE POLYAMIDE / DNA | ![]() Method | ![]() ![]() ![]() Kielkopf, C.L. / Baird, E.E. / Dervan, P.B. / Rees, D.C. | ![]() ![]() Title: Structural basis for G.C recognition in the DNA minor groove. Authors: Kielkopf, C.L. / Baird, E.E. / Dervan, P.B. / Rees, D.C. History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 25.6 KB | Display | ![]() |
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PDB format | ![]() | 17 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 476.1 KB | Display | ![]() |
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Full document | ![]() | 490.4 KB | Display | |
Data in XML | ![]() | 4.6 KB | Display | |
Data in CIF | ![]() | 5.8 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Similar structure data |
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Links
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Assembly
Deposited unit | ![]()
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Unit cell |
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Components
#1: DNA chain | Mass: 3124.888 Da / Num. of mol.: 2 Source method: isolated from a genetically manipulated source #2: Chemical | #3: Water | ChemComp-HOH / | |
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-Experimental details
-Experiment
Experiment | Method: ![]() |
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Sample preparation
Crystal |
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Crystal grow |
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Components of the solutions |
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Crystal | *PLUS Density % sol: 34 % | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Crystal grow | *PLUS Temperature: 4 ℃ / pH: 7.5 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Components of the solutions | *PLUS
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-Data collection
Diffraction |
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Diffraction source |
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Detector |
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Radiation |
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Radiation wavelength |
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Reflection | Resolution: 2→18 Å / Num. obs: 4124 / % possible obs: 93.9 % / Redundancy: 6.1 % / Rmerge(I) obs: 0.027 | ||||||||||||||||||
Reflection | *PLUS Highest resolution: 2 Å / Lowest resolution: 18 Å / % possible obs: 93.9 % / Redundancy: 6.1 % |
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Processing
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Refinement | Resolution: 2→18 Å / σ(F): 0
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Refinement step | Cycle: LAST / Resolution: 2→18 Å
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Refine LS restraints |
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Software | *PLUS Name: ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refinement | *PLUS Highest resolution: 2 Å / Lowest resolution: 18 Å / σ(F): 0 / % reflection Rfree: 5 % | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Solvent computation | *PLUS | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Displacement parameters | *PLUS |