- PDB-2y51: Crystal structure of E167A mutant of the box pathway encoded ALDH... -
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Open data
ID or keywords:
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Basic information
Entry
Database: PDB / ID: 2y51
Title
Crystal structure of E167A mutant of the box pathway encoded ALDH from Burkholderia xenovorans LB400
Components
ALDEHYDE DEHYDROGENASE (BOX PATHWAY)
Keywords
OXIDOREDUCTASE
Function / homology
Function and homology information
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor / Oxidoreductases; Acting on the aldehyde or oxo group of donors; With NAD+ or NADP+ as acceptor / nucleotide binding Similarity search - Function
Phenylacetic acid degradation protein PaaN / Aldehyde Dehydrogenase; Chain A, domain 2 / Aldehyde Dehydrogenase; Chain A, domain 2 / Aldehyde Dehydrogenase; Chain A, domain 1 / Aldehyde Dehydrogenase; Chain A, domain 1 / Aldehyde dehydrogenase domain / Aldehyde dehydrogenase family / Aldehyde dehydrogenase, N-terminal / Aldehyde dehydrogenase, C-terminal / Aldehyde/histidinol dehydrogenase ...Phenylacetic acid degradation protein PaaN / Aldehyde Dehydrogenase; Chain A, domain 2 / Aldehyde Dehydrogenase; Chain A, domain 2 / Aldehyde Dehydrogenase; Chain A, domain 1 / Aldehyde Dehydrogenase; Chain A, domain 1 / Aldehyde dehydrogenase domain / Aldehyde dehydrogenase family / Aldehyde dehydrogenase, N-terminal / Aldehyde dehydrogenase, C-terminal / Aldehyde/histidinol dehydrogenase / 3-Layer(aba) Sandwich / Alpha Beta Similarity search - Domain/homology
Method to determine structure: OTHER Starting model: NONE Resolution: 1.6→37.72 Å / Cor.coef. Fo:Fc: 0.953 / Cor.coef. Fo:Fc free: 0.922 / SU B: 2.156 / SU ML: 0.073 / Cross valid method: THROUGHOUT / ESU R: 0.1 / ESU R Free: 0.107 / Stereochemistry target values: MAXIMUM LIKELIHOOD / Details: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.
Rfactor
Num. reflection
% reflection
Selection details
Rfree
0.23029
6137
5 %
RANDOM
Rwork
0.17918
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obs
0.18171
115662
93.37 %
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Solvent computation
Ion probe radii: 0.8 Å / Shrinkage radii: 0.8 Å / VDW probe radii: 1.4 Å / Solvent model: MASK