- PDB-2vr4: Transition-state mimicry in mannoside hydrolysis: characterisatio... -
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IDまたはキーワード:
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基本情報
登録情報
データベース: PDB / ID: 2vr4
タイトル
Transition-state mimicry in mannoside hydrolysis: characterisation of twenty six inhibitors and insight into binding from linear free energy relationships and 3-D structure
要素
BETA-MANNOSIDASE
キーワード
HYDROLASE / LINEAR FREE ENERGY RELATIONSHIP / TRANSITION STATE MIMIC / MANNOSIDASE / GLYCOSIDE HYDROLASE
機能・相同性
機能・相同性情報
beta-mannosidase / beta-mannosidase activity / glycoprotein catabolic process / carbohydrate metabolic process / extracellular region 類似検索 - 分子機能
解像度: 1.8→65.37 Å / Cor.coef. Fo:Fc: 0.961 / Cor.coef. Fo:Fc free: 0.938 / SU B: 2.823 / SU ML: 0.089 / 交差検証法: THROUGHOUT / ESU R: 0.126 / ESU R Free: 0.125 / 立体化学のターゲット値: MAXIMUM LIKELIHOOD 詳細: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. RESIDUES 26-27, 850 AND 865-871 ARE DISORDERED IN CHAIN A, AND RESIDUES 26 AND 868-871 ARE DISORDERED IN CHAIN B.
Rfactor
反射数
%反射
Selection details
Rfree
0.222
8536
5 %
RANDOM
Rwork
0.177
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obs
0.179
163754
99.3 %
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溶媒の処理
イオンプローブ半径: 0.8 Å / 減衰半径: 0.8 Å / VDWプローブ半径: 1.2 Å / 溶媒モデル: MASK