SHEET THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN ORDER TO REPRESENT THIS FEATURE IN ... SHEET THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, TWO SHEETS ARE DEFINED.
Mass: 18.015 Da / Num. of mol.: 39 / Source method: isolated from a natural source / Formula: H2O
Compound details
ENGINEERED RESIDUE IN CHAIN A, ARG 279 TO ALA ENGINEERED RESIDUE IN CHAIN B, ARG 279 TO ALA ...ENGINEERED RESIDUE IN CHAIN A, ARG 279 TO ALA ENGINEERED RESIDUE IN CHAIN B, ARG 279 TO ALA ENGINEERED RESIDUE IN CHAIN C, ARG 279 TO ALA
Sequence details
POINT MUTATION INTRODUCED AT R279 INTO A279 WHEN COMPARED TO UNIPROT Q94M05
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Experimental details
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Experiment
Experiment
Method: X-RAY DIFFRACTION / Number of used crystals: 1
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Sample preparation
Crystal
Density Matthews: 2.6 Å3/Da / Density % sol: 53 % Description: CRYSTALS OF P4 MUTANT R279A IN COMPLEX WITH ATP ARE ISOMORPHOUS WITH P4-AMPCPP-MG CRYSTALS
Monochromator: SI(111) / Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray
Radiation wavelength
Wavelength: 0.9395 Å / Relative weight: 1
Reflection
Resolution: 3→30 Å / Num. obs: 22064 / % possible obs: 100 % / Observed criterion σ(I): 2 / Redundancy: 4.6 % / Rmerge(I) obs: 0.28 / Net I/σ(I): 6
Reflection shell
Resolution: 3→3.11 Å / Redundancy: 4.6 % / Rmerge(I) obs: 0.98 / Mean I/σ(I) obs: 1.5 / % possible all: 100
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Processing
Software
Name
Version
Classification
REFMAC
5.2.0019
refinement
DENZO
datareduction
SCALEPACK
datascaling
CNS
phasing
Refinement
Method to determine structure: OTHER Starting model: NONE Resolution: 3→101.02 Å / Cor.coef. Fo:Fc: 0.875 / Cor.coef. Fo:Fc free: 0.819 / SU B: 20.089 / SU ML: 0.358 / Cross valid method: THROUGHOUT / ESU R Free: 0.505 / Stereochemistry target values: MAXIMUM LIKELIHOOD / Details: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.
Rfactor
Num. reflection
% reflection
Selection details
Rfree
0.285
1126
5.1 %
RANDOM
Rwork
0.247
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obs
0.249
20937
99.5 %
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Solvent computation
Ion probe radii: 0.8 Å / Shrinkage radii: 0.8 Å / VDW probe radii: 1.2 Å / Solvent model: BABINET MODEL WITH MASK