small GTPase binding => GO:0031267 / activation of GTPase activity / 14-3-3 protein binding / GTPase activator activity / intracellular protein transport / protein homodimerization activity 類似検索 - 分子機能
BIOMOLECULE: 1, 2 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT WHICH CONSISTS OF 2 ... BIOMOLECULE: 1, 2 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT WHICH CONSISTS OF 2 CHAIN(S). AUTHORS STATE THAT THE BIOLOGICAL UNIT OF THIS PROTEIN IS UNKNOWN.
解像度: 2.1→30 Å / Cor.coef. Fo:Fc: 0.945 / Cor.coef. Fo:Fc free: 0.913 / WRfactor Rfree: 0.238 / WRfactor Rwork: 0.19 / SU B: 5.236 / SU ML: 0.143 / ESU R: 0.234 / ESU R Free: 0.202 詳細: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. arp/warp, molprobity, coot programs have also been used in refinement.
Rfactor
反射数
%反射
Selection details
Rfree
0.2571
2049
5.229 %
thin shells
Rwork
0.2021
-
-
-
all
0.205
-
-
-
obs
-
39184
99.187 %
-
溶媒の処理
イオンプローブ半径: 0.8 Å / 減衰半径: 0.8 Å / VDWプローブ半径: 1.4 Å / 溶媒モデル: MASK BULK SOLVENT
原子変位パラメータ
Biso mean: 25.763 Å2
Baniso -1
Baniso -2
Baniso -3
1-
0.597 Å2
0 Å2
-1.056 Å2
2-
-
-0.924 Å2
0 Å2
3-
-
-
0.193 Å2
精密化ステップ
サイクル: LAST / 解像度: 2.1→30 Å
タンパク質
核酸
リガンド
溶媒
全体
原子数
4900
0
12
80
4992
拘束条件
Refine-ID
タイプ
Dev ideal
Dev ideal target
数
X-RAY DIFFRACTION
r_bond_refined_d
0.017
0.022
5041
X-RAY DIFFRACTION
r_bond_other_d
0.001
0.02
3441
X-RAY DIFFRACTION
r_angle_refined_deg
1.395
1.947
6861
X-RAY DIFFRACTION
r_angle_other_deg
0.993
3
8324
X-RAY DIFFRACTION
r_dihedral_angle_1_deg
5.574
5
603
X-RAY DIFFRACTION
r_dihedral_angle_2_deg
37.673
22.827
237
X-RAY DIFFRACTION
r_dihedral_angle_3_deg
14.573
15
833
X-RAY DIFFRACTION
r_dihedral_angle_4_deg
18.829
15
38
X-RAY DIFFRACTION
r_chiral_restr
0.083
0.2
755
X-RAY DIFFRACTION
r_gen_planes_refined
0.005
0.02
5539
X-RAY DIFFRACTION
r_gen_planes_other
0.001
0.02
1103
X-RAY DIFFRACTION
r_nbd_refined
0.206
0.2
1068
X-RAY DIFFRACTION
r_nbd_other
0.185
0.2
3261
X-RAY DIFFRACTION
r_nbtor_refined
0.181
0.2
2453
X-RAY DIFFRACTION
r_nbtor_other
0.087
0.2
2353
X-RAY DIFFRACTION
r_xyhbond_nbd_refined
0.149
0.2
101
X-RAY DIFFRACTION
r_symmetry_vdw_refined
0.155
0.2
7
X-RAY DIFFRACTION
r_symmetry_vdw_other
0.14
0.2
31
X-RAY DIFFRACTION
r_symmetry_hbond_refined
0.15
0.2
5
X-RAY DIFFRACTION
r_mcbond_it
2.742
2
3133
X-RAY DIFFRACTION
r_mcbond_other
0.77
2
1187
X-RAY DIFFRACTION
r_mcangle_it
3.883
3
4889
X-RAY DIFFRACTION
r_scbond_it
2.776
2
2251
X-RAY DIFFRACTION
r_scangle_it
3.786
3
1967
LS精密化 シェル
Refine-ID: X-RAY DIFFRACTION / Total num. of bins used: 20