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- PDB-2lbl: Unmodified Glycyl-tRNA(UCC) anticodon stem-loop from Bacillus subtilis -
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Open data
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Basic information
Entry | Database: PDB / ID: 2lbl | ||||||||||||||||||||
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Title | Unmodified Glycyl-tRNA(UCC) anticodon stem-loop from Bacillus subtilis | ||||||||||||||||||||
![]() | RNA (5'-R(*![]() RNA / anticodon stem-loop | Function / homology | RNA / RNA (> 10) | ![]() Method | SOLUTION NMR / simulated annealing | Model details | lowest energy, model 3 | ![]() Chang, A.T. / Nikonowicz, E.P. | ![]() ![]() Title: Solution Nuclear Magnetic Resonance Analyses of the Anticodon Arms of Proteinogenic and Nonproteinogenic tRNA(Gly). Authors: Chang, A.T. / Nikonowicz, E.P. History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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PDBx/mmCIF format | ![]() | 87.6 KB | Display | ![]() |
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PDB format | ![]() | 72.1 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
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-Validation report
Summary document | ![]() | 409.7 KB | Display | ![]() |
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Full document | ![]() | 450.3 KB | Display | |
Data in XML | ![]() | 6.1 KB | Display | |
Data in CIF | ![]() | 7.5 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
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Links
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Assembly
Deposited unit | ![]()
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NMR ensembles |
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Components
#1: RNA chain | Mass: 5379.237 Da / Num. of mol.: 1 / Source method: obtained synthetically |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||||||||||||||||||
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NMR experiment |
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Sample preparation
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Sample |
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Sample conditions | Ionic strength: 10 / pH: 6.2 / Pressure: ambient / Temperature: 298 K |
-NMR measurement
NMR spectrometer |
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Processing
NMR software |
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Refinement | Method: simulated annealing / Software ordinal: 1 | |||||||||||||||
NMR representative | Selection criteria: lowest energy | |||||||||||||||
NMR ensemble | Conformer selection criteria: structures with the lowest energy Conformers calculated total number: 50 / Conformers submitted total number: 8 |