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Yorodumi- PDB-2l32: solution structure of ubiquitin-like small archaeal modifier prot... -
+Open data
-Basic information
Entry | Database: PDB / ID: 2l32 | ||||||
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Title | solution structure of ubiquitin-like small archaeal modifier protein in Haloferax volcanii | ||||||
Components | Small archaeal modifier protein 2 | ||||||
Keywords | PROTEIN BINDING / Ubiquitin-like small archaeal modifier proteins | ||||||
Function / homology | Factor Xa Inhibitor - #50 / protein modification by small protein conjugation / Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp / Factor Xa Inhibitor / protein tag activity / Few Secondary Structures / Irregular / nucleotide binding / Small archaeal modifier protein 2 Function and homology information | ||||||
Biological species | Haloferax volcanii (archaea) | ||||||
Method | SOLUTION NMR / simulated annealing | ||||||
Authors | Zhang, W. / Fan, K. / Liao, S. / Tu, X. | ||||||
Citation | Journal: To be Published Title: solution structure of ubiquitin-like small archaeal modifier protein in Haloferax volcanii Authors: Fan, S. / Zhang, W. / Liao, S. / Tu, X. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 2l32.cif.gz | 386.3 KB | Display | PDBx/mmCIF format |
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PDB format | pdb2l32.ent.gz | 323.2 KB | Display | PDB format |
PDBx/mmJSON format | 2l32.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/l3/2l32 ftp://data.pdbj.org/pub/pdb/validation_reports/l3/2l32 | HTTPS FTP |
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-Related structure data
Similar structure data | |
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Other databases |
-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: Protein | Mass: 8196.074 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Haloferax volcanii (archaea) / Strain: DS2 / Gene: HVO_0202 / Production host: Escherichia coli (E. coli) / References: UniProt: D4GZE7 |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||||||||||||||||||||||||||||||||||||||||||
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NMR experiment |
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-Sample preparation
Details |
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Sample |
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Sample conditions | Ionic strength: 0.12 / pH: 6.7 / Pressure: ambient / Temperature: 293 K |
-NMR measurement
NMR spectrometer | Type: Bruker DMX / Manufacturer: Bruker / Model: DMX / Field strength: 500 MHz |
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-Processing
NMR software |
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Refinement | Method: simulated annealing / Software ordinal: 1 | ||||||||||||
NMR representative | Selection criteria: closest to the average | ||||||||||||
NMR ensemble | Conformer selection criteria: structures with the lowest energy Conformers calculated total number: 200 / Conformers submitted total number: 20 / Representative conformer: 3 |