+Open data
-Basic information
Entry | Database: PDB / ID: 2kp5 | ||||||
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Title | NMR structure of Hahellin, a beta-gamma crystallin | ||||||
Components | Putative uncharacterized protein | ||||||
Keywords | CALCIUM-BINDING PROTEIN / beta-gamma crystallin / bacterial / UNKNOWN FUNCTION | ||||||
Function / homology | Function and homology information Crystallins / Gamma-B Crystallin; domain 1 / Beta/Gamma crystallin / Crystallins beta and gamma 'Greek key' motif profile. / Beta/gamma crystallin / Gamma-crystallin-like / Coagulation factors 5/8 type C domain (FA58C) profile. / F5/8 type C domain / Coagulation factor 5/8 C-terminal domain / Galactose-binding-like domain superfamily ...Crystallins / Gamma-B Crystallin; domain 1 / Beta/Gamma crystallin / Crystallins beta and gamma 'Greek key' motif profile. / Beta/gamma crystallin / Gamma-crystallin-like / Coagulation factors 5/8 type C domain (FA58C) profile. / F5/8 type C domain / Coagulation factor 5/8 C-terminal domain / Galactose-binding-like domain superfamily / Sandwich / Mainly Beta Similarity search - Domain/homology | ||||||
Biological species | Hahella chejuensis (bacteria) | ||||||
Method | SOLUTION NMR / simulated annealing, torsion angle dynamics | ||||||
Model details | lowest energy, model 1 | ||||||
Authors | Srivastava, A.K. / Sharma, Y. / Chary, K.V. | ||||||
Citation | Journal: To be Published Title: NMR structure of Hahellin, a beta-gamma crystallin Authors: Srivastava, A.K. / Chary, K.V. / Sharma, Y. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 2kp5.cif.gz | 624.1 KB | Display | PDBx/mmCIF format |
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PDB format | pdb2kp5.ent.gz | 532 KB | Display | PDB format |
PDBx/mmJSON format | 2kp5.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/kp/2kp5 ftp://data.pdbj.org/pub/pdb/validation_reports/kp/2kp5 | HTTPS FTP |
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-Related structure data
Similar structure data |
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-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: Protein | Mass: 10262.287 Da / Num. of mol.: 1 / Fragment: UNP residues 162-252 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Hahella chejuensis (bacteria) / Strain: KCTC 2396 / Gene: HCH_03072 / Production host: Escherichia coli (E. coli) / References: UniProt: Q2SHN6 |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||
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NMR experiment |
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-Sample preparation
Details |
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Sample |
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Sample conditions | pH: 6.7 / Pressure: ambient / Temperature: 298 K |
-NMR measurement
NMR spectrometer | Type: Bruker Avance / Manufacturer: Bruker / Model: AVANCE / Field strength: 800 MHz |
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-Processing
NMR software |
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Refinement | Method: simulated annealing, torsion angle dynamics / Software ordinal: 1 | |||||||||||||||||||||
NMR representative | Selection criteria: lowest energy | |||||||||||||||||||||
NMR ensemble | Conformer selection criteria: target function / Conformers calculated total number: 200 / Conformers submitted total number: 20 / Representative conformer: 1 |