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Yorodumi- PDB-2gvb: REFINED SOLUTION STRUCTURE OF THE TYR 41--> HIS MUTANT OF THE M13... -
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-Basic information
Entry | Database: PDB / ID: 2gvb | |||||||||
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Title | REFINED SOLUTION STRUCTURE OF THE TYR 41--> HIS MUTANT OF THE M13 GENE V PROTEIN. A COMPARISON WITH THE CRYSTAL STRUCTURE | |||||||||
Components | GENE V PROTEIN | |||||||||
Keywords | DNA-BINDING (VIRAL) | |||||||||
Function / homology | Function and homology information rolling circle single-stranded viral DNA replication / single-stranded DNA binding / DNA replication Similarity search - Function | |||||||||
Biological species | Enterobacteria phage M13 (virus) | |||||||||
Method | SOLUTION NMR | |||||||||
Authors | Folkers, P.J.M. / Nilges, M. / Folmer, R.H.A. / Prompers, J.J. / Konings, R.N.H. / Hilbers, C.W. | |||||||||
Citation | Journal: Eur.J.Biochem. / Year: 1995 Title: Refined solution structure of the Tyr41-->His mutant of the M13 gene V protein. A comparison with the crystal structure. Authors: Prompers, J.J. / Folmer, R.H. / Nilges, M. / Folkers, P.J. / Konings, R.N. / Hilbers, C.W. #1: Journal: J.Mol.Biol. / Year: 1994 Title: The Solution Structure of the Tyr 41--> His Mutant of the Single-Stranded DNA Binding Protein Encoded by Gene V of the Filamentous Bacteriophage M13 Authors: Folkers, P.J.M. / Nilges, M. / Folmer, R.H.A. / Konings, R.N.H. / Hilbers, C.W. #2: Journal: Biochemistry / Year: 1993 Title: Exploring the DNA Binding Domain of Gene V Protein Encoded by Bacteriophage M13 with the Aid of Spin-Labeled Oligonucleotides in Combination with H-NMR Authors: Folkers, P.J.M. / Van Duynhoven, J.P.M. / Van Lieshout, H.T.M. / Harmsen, B.J.M. / Van Boom, J.H. / Tesser, G.I. / Konings, R.N.H. / Hilbers, C.W. #3: Journal: Eur.J.Biochem. / Year: 1991 Title: Sequence-Specific H-NMR Assignment and Secondary Structure of the Tyr 41--> His Mutant of the Single-Stranded DNA Binding Protein, Gene V Protein, Encoded by the Filamentous Bacteriophage M13 Authors: Folkers, P.J.M. / Van Duynhoven, J.P.M. / Jonker, A.J. / Harmsen, B.J.M. / Konings, R.N.H. / Hilbers, C.W. #4: Journal: Eur.J.Biochem. / Year: 1991 Title: Characterization of Wild-Type and Mutant M13 Gene V Proteins by Means of H-NMR Authors: Folkers, P.J.M. / Stassen, A.P.M. / Van Duynhoven, J.P.M. / Harmsen, B.J.M. / Konings, R.N.H. / Hilbers, C.W. | |||||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 2gvb.cif.gz | 68.9 KB | Display | PDBx/mmCIF format |
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PDB format | pdb2gvb.ent.gz | 52.5 KB | Display | PDB format |
PDBx/mmJSON format | 2gvb.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 2gvb_validation.pdf.gz | 245.1 KB | Display | wwPDB validaton report |
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Full document | 2gvb_full_validation.pdf.gz | 244.9 KB | Display | |
Data in XML | 2gvb_validation.xml.gz | 8.2 KB | Display | |
Data in CIF | 2gvb_validation.cif.gz | 10.3 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/gv/2gvb ftp://data.pdbj.org/pub/pdb/validation_reports/gv/2gvb | HTTPS FTP |
-Related structure data
-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: Protein | Mass: 9674.188 Da / Num. of mol.: 2 / Mutation: Y41H Source method: isolated from a genetically manipulated source Source: (gene. exp.) Enterobacteria phage M13 (virus) / Genus: Inovirus / Plasmid: M13 / References: UniProt: P69544 |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR |
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-Sample preparation
Crystal grow | *PLUS Method: other / Details: NMR |
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-Processing
Software |
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NMR software |
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NMR ensemble | Conformers submitted total number: 1 |