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Yorodumi- PDB-2fcr: CRYSTAL STRUCTURE OF OXIDIZED FLAVODOXIN FROM A RED ALGA CHONDRUS... -
+Open data
-Basic information
Entry | Database: PDB / ID: 2fcr | ||||||
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Title | CRYSTAL STRUCTURE OF OXIDIZED FLAVODOXIN FROM A RED ALGA CHONDRUS CRISPUS REFINED AT 1.8 ANGSTROMS RESOLUTION: DESCRIPTION OF THE FLAVIN MONONUCLEOTIDE BINDING SITE | ||||||
Components | FLAVODOXIN | ||||||
Keywords | ELECTRON TRANSPORT | ||||||
Function / homology | Function and homology information | ||||||
Biological species | Chondrus crispus (carragheen) | ||||||
Method | X-RAY DIFFRACTION / Resolution: 1.8 Å | ||||||
Authors | Fukuyama, K. | ||||||
Citation | Journal: J.Mol.Biol. / Year: 1992 Title: Crystal structure of oxidized flavodoxin from a red alga Chondrus crispus refined at 1.8 A resolution. Description of the flavin mononucleotide binding site Authors: Fukuyama, K. / Matsubara, H. / Rogers, L.J. #1: Journal: J.Biol.Chem. / Year: 1990 Title: Tertiary Structure of Oxidized Flavodoxin from an Eukaryotic Red Alga Chondrus Crispus at 2.35-Angstroms Resolution. Localization of Charged Residues and Implication for Interaction with Electron Transfer Partners Authors: Fukuyama, K. / Wakabayashi, S. / Matsubara, H. / Rogers, L.J. #2: Journal: J.Biochem.(Tokyo) / Year: 1989 Title: Crystallization and Preliminary X-Ray Diffraction Studies of Oxidized Flavodoxin from Chondrus Crispus, a Red Alga Authors: Fukuyama, K. / Matsubara, H. / Katsube, Y. / Rogers, L.J. #3: Journal: Biochem.J. / Year: 1989 Title: The Amino Acid Sequence of a Flavodoxin from the Eukaryotic Red Alga Chondrus Crispus Authors: Wakabayashi, S. / Kimura, T. / Fukuyama, K. / Matsubara, H. / Rogers, L.J. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 2fcr.cif.gz | 43 KB | Display | PDBx/mmCIF format |
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PDB format | pdb2fcr.ent.gz | 29.2 KB | Display | PDB format |
PDBx/mmJSON format | 2fcr.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 2fcr_validation.pdf.gz | 749.5 KB | Display | wwPDB validaton report |
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Full document | 2fcr_full_validation.pdf.gz | 752.8 KB | Display | |
Data in XML | 2fcr_validation.xml.gz | 9.3 KB | Display | |
Data in CIF | 2fcr_validation.cif.gz | 12.7 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/fc/2fcr ftp://data.pdbj.org/pub/pdb/validation_reports/fc/2fcr | HTTPS FTP |
-Related structure data
Similar structure data |
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-Links
-Assembly
Deposited unit |
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1 |
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Unit cell |
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-Components
#1: Protein | Mass: 18885.812 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Chondrus crispus (carragheen) / References: UniProt: P14070 |
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#2: Chemical | ChemComp-FMN / |
#3: Water | ChemComp-HOH / |
-Experimental details
-Experiment
Experiment | Method: X-RAY DIFFRACTION |
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-Sample preparation
Crystal | Density Matthews: 2.33 Å3/Da / Density % sol: 47.3 % |
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-Processing
Software | Name: PROLSQ / Classification: refinement | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Refinement | Resolution: 1.8→6 Å / Rfactor obs: 0.188 / σ(F): 2 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refinement step | Cycle: LAST / Resolution: 1.8→6 Å
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Refine LS restraints |
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