- PDB-2dlw: Solution structure of the IRS domain of human docking protein 2, ... -
+
Open data
ID or keywords:
Loading...
-
Basic information
Entry
Database: PDB / ID: 2dlw
Title
Solution structure of the IRS domain of human docking protein 2, isoform a
Components
Docking protein 2, isoform a
Keywords
SIGNALING PROTEIN / IRS domain / Docking protein 2 / isoform a / Structural Genomics / NPPSFA / National Project on Protein Structural and Functional Analyses / RIKEN Structural Genomics/Proteomics Initiative / RSGI
Function / homology
Function and homology information
transmembrane receptor protein tyrosine kinase adaptor activity / leukocyte migration / RET signaling / cell surface receptor protein tyrosine kinase signaling pathway / Tie2 Signaling / viral process / axon guidance / Ras protein signal transduction / positive regulation of MAPK cascade / cell surface receptor signaling pathway ...transmembrane receptor protein tyrosine kinase adaptor activity / leukocyte migration / RET signaling / cell surface receptor protein tyrosine kinase signaling pathway / Tie2 Signaling / viral process / axon guidance / Ras protein signal transduction / positive regulation of MAPK cascade / cell surface receptor signaling pathway / signal transduction / cytosol / cytoplasm Similarity search - Function
Conformer selection criteria: target function, structures with the lowest energy, structures with the least restraint violations Conformers calculated total number: 100 / Conformers submitted total number: 20
+
About Yorodumi
-
News
-
Feb 9, 2022. New format data for meta-information of EMDB entries
New format data for meta-information of EMDB entries
Version 3 of the EMDB header file is now the official format.
The previous official version 1.9 will be removed from the archive.
In the structure databanks used in Yorodumi, some data are registered as the other names, "COVID-19 virus" and "2019-nCoV". Here are the details of the virus and the list of structure data.
Jan 31, 2019. EMDB accession codes are about to change! (news from PDBe EMDB page)
EMDB accession codes are about to change! (news from PDBe EMDB page)
The allocation of 4 digits for EMDB accession codes will soon come to an end. Whilst these codes will remain in use, new EMDB accession codes will include an additional digit and will expand incrementally as the available range of codes is exhausted. The current 4-digit format prefixed with “EMD-” (i.e. EMD-XXXX) will advance to a 5-digit format (i.e. EMD-XXXXX), and so on. It is currently estimated that the 4-digit codes will be depleted around Spring 2019, at which point the 5-digit format will come into force.
The EM Navigator/Yorodumi systems omit the EMD- prefix.
Related info.:Q: What is EMD? / ID/Accession-code notation in Yorodumi/EM Navigator
Yorodumi is a browser for structure data from EMDB, PDB, SASBDB, etc.
This page is also the successor to EM Navigator detail page, and also detail information page/front-end page for Omokage search.
The word "yorodu" (or yorozu) is an old Japanese word meaning "ten thousand". "mi" (miru) is to see.
Related info.:EMDB / PDB / SASBDB / Comparison of 3 databanks / Yorodumi Search / Aug 31, 2016. New EM Navigator & Yorodumi / Yorodumi Papers / Jmol/JSmol / Function and homology information / Changes in new EM Navigator and Yorodumi