+Open data
-Basic information
Entry | Database: PDB / ID: 2adt | ||||||
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Title | NMR structure of a 30 kDa GAAA tetraloop-receptor complex. | ||||||
Components | 43-MER | ||||||
Keywords | RNA / GAAA tetraloop GAAA tetraloop-receptor | ||||||
Function / homology | RNA / RNA (> 10) Function and homology information | ||||||
Method | SOLUTION NMR | ||||||
Authors | Davis, J.H. / Tonelli, M. / Scott, L.G. / Jaeger, L. / Williamson, J.R. / Butcher, S.E. | ||||||
Citation | Journal: J.Mol.Biol. / Year: 2005 Title: RNA Helical Packing in Solution: NMR Structure of a 30 kDa GAAA Tetraloop-Receptor Complex Authors: Davis, J.H. / Tonelli, M. / Scott, L.G. / Jaeger, L. / Williamson, J.R. / Butcher, S.E. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 2adt.cif.gz | 1 MB | Display | PDBx/mmCIF format |
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PDB format | pdb2adt.ent.gz | 887.7 KB | Display | PDB format |
PDBx/mmJSON format | 2adt.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 2adt_validation.pdf.gz | 323.7 KB | Display | wwPDB validaton report |
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Full document | 2adt_full_validation.pdf.gz | 611 KB | Display | |
Data in XML | 2adt_validation.xml.gz | 52.4 KB | Display | |
Data in CIF | 2adt_validation.cif.gz | 80.2 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/ad/2adt ftp://data.pdbj.org/pub/pdb/validation_reports/ad/2adt | HTTPS FTP |
-Related structure data
-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: RNA chain | Mass: 13873.258 Da / Num. of mol.: 2 / Source method: obtained synthetically / Details: GAAA tetraloop-receptor RNA |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||||||||||||||||||
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NMR experiment |
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-Sample preparation
Details |
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Sample conditions |
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-NMR measurement
Radiation | Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M | ||||||||||||||||||||||||||||||
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Radiation wavelength | Relative weight: 1 | ||||||||||||||||||||||||||||||
NMR spectrometer |
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-Processing
NMR software |
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NMR representative | Selection criteria: lowest energy | ||||||||||||||||||||||||||||
NMR ensemble | Conformer selection criteria: structures with the lowest energy Conformers calculated total number: 100 / Conformers submitted total number: 20 |