- PDB-1zee: X-Ray Crystal Structure of Protein SO4414 from Shewanella oneiden... -
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Basic information
Entry
Database: PDB / ID: 1zee
Title
X-Ray Crystal Structure of Protein SO4414 from Shewanella oneidensis. Northeast Structural Genomics Consortium Target SoR52.
Components
hypothetical protein SO4414
Keywords
UNKNOWN FUNCTION / all alpha-protein. / Structural Genomics / PSI / Protein Structure Initiative / Northeast Structural Genomics Consortium / NESG
Function / homology
Function and homology information
tryptophan 2,3-dioxygenase / tryptophan 2,3-dioxygenase activity / tryptophan catabolic process to kynurenine / heme binding / metal ion binding Similarity search - Function
Resolution: 2.3→2.38 Å / Redundancy: 4.7 % / Rmerge(I) obs: 0.306 / Mean I/σ(I) obs: 4.46 / Num. unique all: 7238 / Rsym value: 0.268 / % possible all: 99.6
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Processing
Software
Name
Version
Classification
CNS
1.1
refinement
DENZO
datareduction
SCALEPACK
datascaling
SOLVE
phasing
Refinement
Method to determine structure: SAD / Resolution: 2.31→27.5 Å / Rfactor Rfree error: 0.003 / Data cutoff high absF: 296623.33 / Data cutoff low absF: 0 / Isotropic thermal model: OVERALL / Cross valid method: THROUGHOUT / σ(F): 2 / σ(I): 2 / Stereochemistry target values: Engh & Huber Details: SnB was used prior to SOLVE/RESOLVE. XtalView was used for structure refinement in addition to CNS.
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