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- PDB-1thu: THE STRUCTURES OF THREE CRYSTAL FORMS OF THE SWEET PROTEIN THAUMATIN -
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Open data
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Basic information
Entry | Database: PDB / ID: 1thu | ||||||
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Title | THE STRUCTURES OF THREE CRYSTAL FORMS OF THE SWEET PROTEIN THAUMATIN | ||||||
![]() | THAUMATIN ISOFORM B | ||||||
![]() | SWEET TASTING PROTEIN | ||||||
Function / homology | ![]() | ||||||
Biological species | ![]() | ||||||
Method | ![]() | ||||||
![]() | Ko, T.-P. / Day, J. / Greenwood, A. / McPherson, A. | ||||||
![]() | ![]() Title: Structures of three crystal forms of the sweet protein thaumatin. Authors: Ko, T.P. / Day, J. / Greenwood, A. / McPherson, A. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 49.1 KB | Display | ![]() |
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PDB format | ![]() | 35.6 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 410 KB | Display | ![]() |
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Full document | ![]() | 432.9 KB | Display | |
Data in XML | ![]() | 12.6 KB | Display | |
Data in CIF | ![]() | 16.1 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
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Links
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Assembly
Deposited unit | ![]()
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1 |
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Unit cell |
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Atom site foot note | 1: CIS PROLINE - PRO 84 |
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Components
#1: Protein | Mass: 22243.119 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() |
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Sequence details | CROSS REFERENCE TO SEQUENCE DATABASE SWISS-PROT ENTRY NAME PDB ENTRY CHAIN NAME THM1_THADA SEQUENCE ...CROSS REFERENCE TO SEQUENCE DATABASE SWISS-PROT ENTRY NAME PDB ENTRY CHAIN NAME THM1_THADA SEQUENCE ADVISORY NOTICE DIFFERENCE |
-Experimental details
-Experiment
Experiment | Method: ![]() |
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Sample preparation
Crystal | Density Matthews: 2.25 Å3/Da / Density % sol: 45.34 % |
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Crystal grow | *PLUS Method: vapor diffusion |
Components of the solutions | *PLUS Common name: PEG3350 |
-Data collection
Reflection | *PLUS Highest resolution: 2.61 Å / Num. obs: 8350 / % possible obs: 70.8 % / Num. measured all: 27736 / Rmerge(I) obs: 0.1062 |
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Reflection shell | *PLUS Highest resolution: 2.61 Å / Lowest resolution: 2.81 Å / % possible obs: 38.1 % / Num. unique obs: 892 / Num. measured obs: 1854 / Rmerge(I) obs: 0.17 / Mean I/σ(I) obs: 4.84 |
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Processing
Software | Name: TNT / Classification: refinement | ||||||||||||||||||||||||||||||
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Refinement | Resolution: 2.6→8 Å / σ(F): 3 /
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Refinement step | Cycle: LAST / Resolution: 2.6→8 Å
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Refine LS restraints |
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Software | *PLUS Name: TNT / Classification: refinement | ||||||||||||||||||||||||||||||
Refinement | *PLUS Rfactor obs: 0.184 | ||||||||||||||||||||||||||||||
Solvent computation | *PLUS | ||||||||||||||||||||||||||||||
Displacement parameters | *PLUS Biso mean: 17.76 Å2 | ||||||||||||||||||||||||||||||
Refine LS restraints | *PLUS
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