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Yorodumi- PDB-1mvm: MVM(STRAIN I), COMPLEX(VIRAL COAT/DNA), VP2, PH=7.5, T=4 DEGREES C -
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Open data
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Basic information
| Entry | Database: PDB / ID: 1mvm | |||||||||
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| Title | MVM(STRAIN I), COMPLEX(VIRAL COAT/DNA), VP2, PH=7.5, T=4 DEGREES C | |||||||||
Components |
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Keywords | Virus/DNA / COMPLEX (VIRAL COAT PROTEIN-DNA) / VIRAL COAT PROTEIN/NUCLEIC ACID / Icosahedral virus / Virus-DNA COMPLEX | |||||||||
| Function / homology | Function and homology informationsymbiont entry into host cell via permeabilization of host membrane / microtubule-dependent intracellular transport of viral material towards nucleus / T=1 icosahedral viral capsid / viral penetration into host nucleus / host cell / clathrin-dependent endocytosis of virus by host cell / virion attachment to host cell / host cell nucleus / structural molecule activity / metal ion binding Similarity search - Function | |||||||||
| Biological species | Minute virus of mice | |||||||||
| Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 3.5 Å | |||||||||
Authors | Llamas-Saiz, A.L. / Agbandje-McKenna, M. / Rossmann, M.G. | |||||||||
Citation | Journal: Acta Crystallogr.,Sect.D / Year: 1997Title: Structure determination of minute virus of mice. Authors: Llamas-Saiz, A.L. / Agbandje-McKenna, M. / Wikoff, W.R. / Bratton, J. / Tattersall, P. / Rossmann, M.G. #1: Journal: To be PublishedTitle: Functional Implications of the Structure of the Murine Parvovirus, Minute Virus of Mice Authors: Agbandje-McKenna, M. / Llamas-Saiz, A.L. / Weng, F. / Tattersall, P.J. / Rossmann, M.G. #2: Journal: Virology / Year: 1993Title: Structure, Sequence, and Function Correlations Among Parvoviruses Authors: Chapman, M.S. / Rossmann, M.G. #3: Journal: Proteins / Year: 1993Title: Structure Determination of Feline Panleukopenia Virus Empty Particles Authors: Agbandje, M. / McKenna, R. / Rossmann, M.G. / Strassheim, M.L. / Parrish, C.R. #4: Journal: Acta Crystallogr.,Sect.D / Year: 1993Title: Determination and Refinement of the Canine Parvovirus Empty-Capsid Structure Authors: Wu, H. / Keller, W. / Rossmann, M.G. #5: Journal: J.Virol. / Year: 1992Title: Two Amino Acid Substitutions within the Capsid are Coordinately Required for Acquisition of Fibrotropism by the Lymphotropic Strain of Minute Virus of Mice Authors: Ball-Goodrich, L.J. / Tattersall, P. #6: Journal: Acta Crystallogr.,Sect.B / Year: 1992Title: Structure Determination of Monoclinic Canine Parvovirus Authors: Tsao, J. / Chapman, M.S. / Wu, H. / Agbandje, M. / Keller, W. / Rossmann, M.G. #7: Journal: Science / Year: 1991Title: The Three-Dimensional Structure of Canine Parvovirus and its Functional Implications Authors: Tsao, J. / Chapman, M.S. / Agbandje, M. / Keller, W. / Smith, K. / Wu, H. / Luo, M. / Smith, T.J. / Rossmann, M.G. / Compans, R.W. / Parrish, C.R. | |||||||||
| History |
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Structure visualization
| Structure viewer | Molecule: Molmil Jmol/JSmol |
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Downloads & links
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Download
| PDBx/mmCIF format | 1mvm.cif.gz | 121.4 KB | Display | PDBx/mmCIF format |
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| PDB format | pdb1mvm.ent.gz | 91.3 KB | Display | PDB format |
| PDBx/mmJSON format | 1mvm.json.gz | Tree view | PDBx/mmJSON format | |
| Others | Other downloads |
-Validation report
| Summary document | 1mvm_validation.pdf.gz | 392 KB | Display | wwPDB validaton report |
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| Full document | 1mvm_full_validation.pdf.gz | 482.2 KB | Display | |
| Data in XML | 1mvm_validation.xml.gz | 25.6 KB | Display | |
| Data in CIF | 1mvm_validation.cif.gz | 36.1 KB | Display | |
| Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/mv/1mvm ftp://data.pdbj.org/pub/pdb/validation_reports/mv/1mvm | HTTPS FTP |
-Related structure data
| Similar structure data |
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Links
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Assembly
| Deposited unit | ![]()
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| Unit cell |
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| Symmetry | Point symmetry: (Hermann–Mauguin notation: 532 / Schoenflies symbol: I (icosahedral)) | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Noncrystallographic symmetry (NCS) | NCS oper:
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About Yorodumi



Minute virus of mice
X-RAY DIFFRACTION
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