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- PDB-1mrt: CONFORMATION OF CD-7 METALLOTHIONEIN-2 FROM RAT LIVER IN AQUEOUS ... -

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Entry
Database: PDB / ID: 1mrt
TitleCONFORMATION OF CD-7 METALLOTHIONEIN-2 FROM RAT LIVER IN AQUEOUS SOLUTION DETERMINED BY NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY
ComponentsCD7 METALLOTHIONEIN-2
KeywordsMETALLOTHIONEIN
Function / homology
Function and homology information


Metallothioneins bind metals / negative regulation of growth / detoxification of copper ion / intracellular zinc ion homeostasis / cellular response to zinc ion / cellular response to cadmium ion / cellular response to copper ion / zinc ion binding / metal ion binding / nucleus / cytoplasm
Similarity search - Function
Metallothionein, vertebrate / Metallothionein, vertebrate, metal binding site / Metallothionein domain superfamily, vertebrate / Metallothionein / Vertebrate metallothioneins signature. / Metallothionein domain superfamily
Similarity search - Domain/homology
: / Metallothionein-2
Similarity search - Component
Biological speciesRattus rattus (black rat)
MethodSOLUTION NMR
AuthorsBraun, W. / Schultze, P. / Woergoetter, E. / Wagner, G. / Vasak, M. / Kaegi, J.H.R. / Wuthrich, K.
Citation
Journal: J.Mol.Biol. / Year: 1988
Title: Conformation of [Cd7]-metallothionein-2 from rat liver in aqueous solution determined by nuclear magnetic resonance spectroscopy.
Authors: Schultze, P. / Worgotter, E. / Braun, W. / Wagner, G. / Vasak, M. / Kagi, J.H. / Wuthrich, K.
#1: Journal: J.Mol.Biol. / Year: 1988
Title: Three-Dimensional Structure of Rabbit Liver Cd-7 Metallothionein-2A in Aqueous Solution Determined by Nuclear Magnetic Resonance.
Authors: Arseniev, A. / Schultze, P. / Woergoetter, E. / Braun, W. / Wagner, G. / Vasak, M. / Kaegi, J.H.R. / Wuthrich, K.
#2: Journal: Eur.J.Biochem. / Year: 1987
Title: Sequence-Specific 1H-NMR Assignments in Rat-Liver Metallothionein-2
Authors: Woergoetter, E. / Wagner, G. / Vasak, M. / Kaegi, J.H.R. / Wuthrich, K.
#3: Journal: J.Mol.Biol. / Year: 1987
Title: Metal Co-Ordination in Rat Liver Metallothionein-2 Prepared with or without Reconstitution of the Metal Clusters, and Comparison with Rabbit Liver Metallothionein-2.
Authors: Vasak, M. / Woergoetter, E. / Wagner, G. / Kaegi, J.H.R. / Wuthrich, K.
History
DepositionMay 14, 1990Processing site: BNL
Revision 1.0Apr 15, 1991Provider: repository / Type: Initial release
Revision 1.1Mar 3, 2008Group: Version format compliance
Revision 1.2Jul 13, 2011Group: Version format compliance
Revision 1.3Feb 23, 2022Group: Database references / Derived calculations / Other
Category: database_2 / pdbx_database_status ...database_2 / pdbx_database_status / pdbx_struct_assembly / pdbx_struct_conn_angle / pdbx_struct_oper_list / struct_conn / struct_site
Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession ..._database_2.pdbx_DOI / _database_2.pdbx_database_accession / _pdbx_database_status.process_site / _pdbx_struct_conn_angle.ptnr1_auth_seq_id / _pdbx_struct_conn_angle.ptnr1_label_atom_id / _pdbx_struct_conn_angle.ptnr1_label_seq_id / _pdbx_struct_conn_angle.ptnr2_auth_seq_id / _pdbx_struct_conn_angle.ptnr2_label_asym_id / _pdbx_struct_conn_angle.ptnr3_auth_seq_id / _pdbx_struct_conn_angle.ptnr3_label_atom_id / _pdbx_struct_conn_angle.ptnr3_label_seq_id / _pdbx_struct_conn_angle.value / _struct_conn.pdbx_dist_value / _struct_conn.ptnr1_auth_comp_id / _struct_conn.ptnr1_auth_seq_id / _struct_conn.ptnr1_label_asym_id / _struct_conn.ptnr1_label_atom_id / _struct_conn.ptnr1_label_comp_id / _struct_conn.ptnr1_label_seq_id / _struct_conn.ptnr2_auth_comp_id / _struct_conn.ptnr2_auth_seq_id / _struct_conn.ptnr2_label_asym_id / _struct_conn.ptnr2_label_atom_id / _struct_conn.ptnr2_label_comp_id / _struct_conn.ptnr2_label_seq_id / _struct_site.pdbx_auth_asym_id / _struct_site.pdbx_auth_comp_id / _struct_site.pdbx_auth_seq_id
Revision 1.4May 22, 2024Group: Data collection / Category: chem_comp_atom / chem_comp_bond

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Structure visualization

Structure viewerMolecule:
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Assembly

Deposited unit
A: CD7 METALLOTHIONEIN-2
hetero molecules


Theoretical massNumber of molelcules
Total (without water)3,5635
Polymers3,1141
Non-polymers4504
Water00
1


  • Idetical with deposited unit
  • defined by author
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Atom site foot note1: THE FOUR CADMIUM ATOMS AND THE ELEVEN SULPHUR ATOMS TO WHIC THEY ARE BONDED FORM A CD4 S11 METAL CLUSTER.
NMR ensembles
DataCriteria
Number of conformers (submitted / calculated)1 / -
Representative

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Components

#1: Protein/peptide CD7 METALLOTHIONEIN-2


Mass: 3113.765 Da / Num. of mol.: 1
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Rattus rattus (black rat) / References: UniProt: P04355
#2: Chemical
ChemComp-CD / CADMIUM ION


Mass: 112.411 Da / Num. of mol.: 4 / Source method: obtained synthetically / Formula: Cd

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Experimental details

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Experiment

ExperimentMethod: SOLUTION NMR

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Processing

NMR ensembleConformers submitted total number: 1

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