[English] 日本語
Yorodumi- PDB-1lz2: CRYSTALLOGRAPHIC STUDY OF TURKEY EGG-WHITE LYSOZYME AND ITS COMPL... -
+Open data
-Basic information
Entry | Database: PDB / ID: 1lz2 | ||||||
---|---|---|---|---|---|---|---|
Title | CRYSTALLOGRAPHIC STUDY OF TURKEY EGG-WHITE LYSOZYME AND ITS COMPLEX WITH A DISACCHARIDE | ||||||
Components | TURKEY EGG WHITE LYSOZYME | ||||||
Keywords | HYDROLASE (O-GLYCOSYL) | ||||||
Function / homology | Function and homology information glycosaminoglycan binding / cell wall macromolecule catabolic process / lysozyme / lysozyme activity / defense response to Gram-negative bacterium / killing of cells of another organism / defense response to Gram-positive bacterium / extracellular space / identical protein binding / cytoplasm Similarity search - Function | ||||||
Biological species | Meleagris gallopavo (turkey) | ||||||
Method | X-RAY DIFFRACTION / Resolution: 2.8 Å | ||||||
Authors | Bott, R. / Sarma, R. | ||||||
Citation | Journal: J.Mol.Biol. / Year: 1977 Title: Crystallographic study of turkey egg-white lysozyme and its complex with a disaccharide. Authors: Sarma, R. / Bott, R. #1: Journal: J.Mol.Biol. / Year: 1976 Title: Crystal Structure of Turkey Egg-White Lysozyme. Results of the Molecular Replacement Method at 5 Angstroms Resolution Authors: Sarma, R. / Bott, R. | ||||||
History |
|
-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
---|
-Downloads & links
-Download
PDBx/mmCIF format | 1lz2.cif.gz | 13.4 KB | Display | PDBx/mmCIF format |
---|---|---|---|---|
PDB format | pdb1lz2.ent.gz | 5.9 KB | Display | PDB format |
PDBx/mmJSON format | 1lz2.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 1lz2_validation.pdf.gz | 312 KB | Display | wwPDB validaton report |
---|---|---|---|---|
Full document | 1lz2_full_validation.pdf.gz | 312 KB | Display | |
Data in XML | 1lz2_validation.xml.gz | 921 B | Display | |
Data in CIF | 1lz2_validation.cif.gz | 2 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/lz/1lz2 ftp://data.pdbj.org/pub/pdb/validation_reports/lz/1lz2 | HTTPS FTP |
-Related structure data
Similar structure data |
---|
-Links
-Assembly
Deposited unit |
| ||||||||
---|---|---|---|---|---|---|---|---|---|
1 |
| ||||||||
Unit cell |
|
-Components
#1: Protein | Mass: 14256.119 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Meleagris gallopavo (turkey) / References: UniProt: P00703 |
---|
-Experimental details
-Experiment
Experiment | Method: X-RAY DIFFRACTION |
---|
-Sample preparation
Crystal | Density Matthews: 2.16 Å3/Da / Density % sol: 43.02 % |
---|---|
Crystal grow | *PLUS Method: other / Details: Bott, R., (1976) J. Mol. Biol., 106, 1037. |
-Processing
Refinement | Highest resolution: 2.8 Å | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Refinement step | Cycle: LAST / Highest resolution: 2.8 Å
| ||||||||||||
Refinement | *PLUS Lowest resolution: 10 Å / Rfactor obs: 0.467 | ||||||||||||
Solvent computation | *PLUS | ||||||||||||
Displacement parameters | *PLUS |