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Open data
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Basic information
Entry | Database: PDB / ID: 1id6 | ||||||
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Title | SOLUTION STRUCTURES OF SYR6 | ||||||
![]() | SYR6 | ||||||
![]() | ANTIVIRAL PROTEIN / SYR6 | ||||||
Function / homology | : ![]() | ||||||
Method | SOLUTION NMR / 4D simulated annealing | ||||||
![]() | Sato, A. / Kawaguchi, K. / Kimura, K. / Tanimura, R. / Sone, S. | ||||||
![]() | ![]() Title: A peptide mimetic of IFN, the first proof of a small peptidic agonist for heterodimeric cytokine receptor Authors: Sato, A. / Kawaguchi, K. / Kimura, K. / Tanimura, R. / Sone, S. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 54.1 KB | Display | ![]() |
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PDB format | ![]() | 37.3 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 336.3 KB | Display | ![]() |
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Full document | ![]() | 408.5 KB | Display | |
Data in XML | ![]() | 10 KB | Display | |
Data in CIF | ![]() | 13.7 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
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Links
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Assembly
Deposited unit | ![]()
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1 |
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NMR ensembles |
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Components
#1: Protein/peptide | Mass: 1784.942 Da / Num. of mol.: 1 / Source method: obtained synthetically / Details: chemically synthesized / References: GenBank: 15076606 |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||||||
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NMR experiment |
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NMR details | Text: These structures were determined using standard 2D homonuclear techniques. |
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Sample preparation
Details | Contents: 2.0mM SYR6; deuterated dimethyl sulfoxide 100% / Solvent system: deuterated dimethyl sulfoxide 100% |
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Sample conditions | Pressure: ambient / Temperature: 293 K |
-NMR measurement
Radiation | Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M |
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Radiation wavelength | Relative weight: 1 |
NMR spectrometer | Type: Varian INOVA / Manufacturer: Varian / Model: INOVA / Field strength: 600 MHz |
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Processing
NMR software |
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Refinement | Method: 4D simulated annealing / Software ordinal: 1 Details: The structures are based on 66 NOE-derived distance constraints. | ||||||||||||
NMR representative | Selection criteria: fewest violations | ||||||||||||
NMR ensemble | Conformer selection criteria: structures with the least restraint violations Conformers calculated total number: 750 / Conformers submitted total number: 11 |