+Open data
-Basic information
Entry | Database: PDB / ID: 1h8c | ||||||
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Title | UBX domain from human faf1 | ||||||
Components | FAS-ASSOCIATED FACTOR 1 | ||||||
Keywords | APOPTOSIS / FAF1 UBX DOMAIN UBIQUITIN-LIKE | ||||||
Function / homology | Function and homology information ooplasm / CD95 death-inducing signaling complex / positive regulation of extrinsic apoptotic signaling pathway via death domain receptors / cytoplasmic sequestering of NF-kappaB / protein kinase regulator activity / VCP-NPL4-UFD1 AAA ATPase complex / regulation of protein catabolic process / NF-kappaB binding / regulation of cell adhesion / : ...ooplasm / CD95 death-inducing signaling complex / positive regulation of extrinsic apoptotic signaling pathway via death domain receptors / cytoplasmic sequestering of NF-kappaB / protein kinase regulator activity / VCP-NPL4-UFD1 AAA ATPase complex / regulation of protein catabolic process / NF-kappaB binding / regulation of cell adhesion / : / heat shock protein binding / positive regulation of DNA replication / ubiquitin binding / positive regulation of protein-containing complex assembly / positive regulation of protein catabolic process / nuclear envelope / proteasome-mediated ubiquitin-dependent protein catabolic process / positive regulation of apoptotic process / protein domain specific binding / apoptotic process / ubiquitin protein ligase binding / protein kinase binding / perinuclear region of cytoplasm / endoplasmic reticulum / nucleoplasm / nucleus / cytosol Similarity search - Function | ||||||
Biological species | HOMO SAPIENS (human) | ||||||
Method | SOLUTION NMR | ||||||
Authors | Bycroft, M.M. | ||||||
Citation | Journal: J.Mol.Biol. / Year: 2001 Title: The Ubx Domain: A Widespread Ubiquitin-Like Module Authors: Buchberger, A. / Howard, M.J. / Proctor, M. / Bycroft, M.M. #1: Journal: Biochem.Biophys.Res.Commun. / Year: 1999 Title: Identification and Characterization of Human Fas Associated Factor 1, Hfaf1 Authors: Ryu, S.W. / Chae, S.K. / Lee, K.J. / Kim, E. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1h8c.cif.gz | 531.4 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1h8c.ent.gz | 447.1 KB | Display | PDB format |
PDBx/mmJSON format | 1h8c.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/h8/1h8c ftp://data.pdbj.org/pub/pdb/validation_reports/h8/1h8c | HTTPS FTP |
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-Related structure data
Similar structure data |
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-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: Protein | Mass: 9600.015 Da / Num. of mol.: 1 / Fragment: UBX DOMAIN Source method: isolated from a genetically manipulated source Source: (gene. exp.) HOMO SAPIENS (human) / Production host: ESCHERICHIA COLI (E. coli) / References: UniProt: Q9UNN5 |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR |
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-Sample preparation
Sample conditions | pH: 5.8 / Temperature: 310 K |
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Crystal grow | *PLUS Method: other / Details: NMR |
-Processing
NMR software | Name: X-PLOR / Version: 3.1 / Developer: BRUNGER / Classification: refinement |
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NMR ensemble | Conformer selection criteria: LOWEST VIOLATIONS / Conformers calculated total number: 100 / Conformers submitted total number: 20 |