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Yorodumi- PDB-1gxi: PsaE Subunit of the Photosystem I of the Cyanobacterium Synechocy... -
+Open data
-Basic information
Entry | Database: PDB / ID: 1gxi | ||||||
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Title | PsaE Subunit of the Photosystem I of the Cyanobacterium Synechocystis sp. PCC 6803 | ||||||
Components | PHOTOSYSTEM I REACTION CENTER SUBUNIT IV | ||||||
Keywords | PHOTOSYNTHESIS / PHOTOSYSTEM I / PSAE SUB-UNIT / THYLAKOID | ||||||
Function / homology | Function and homology information photosystem I reaction center / plasma membrane-derived thylakoid membrane / photosynthesis Similarity search - Function | ||||||
Biological species | SYNECHOCYSTIS SP. (bacteria) | ||||||
Method | SOLUTION NMR / simulated annealing | ||||||
Authors | Barth, P. / Savarin, P. / Gilquin, B. / Lagoutte, B. / Ochsenbein, F. | ||||||
Citation | Journal: Biochemistry / Year: 2002 Title: Solution NMR Structure and Backbone Dynamics of the Psae Subunit of Photosyetm I from Synechocystis Sp. Pcc 6803 Authors: Barth, P. / Savarin, P. / Gilquin, B. / Lagoutte, B. / Ochsenbein, F. #1: Journal: J.Biol.Chem. / Year: 2000 Title: Essential Role of a Single Arginine of Photosystem I in Stabilizing the Electron Transfer Complex with Ferredoxin Authors: Barth, P. / Guillouard, I. / Setif, P. #2: Journal: Biochemistry / Year: 1999 Title: The Solution Structure of Photosystem I Accessory Protein E from the Cyanobacterium Nostoc Sp. Strain Pcc 8009 Authors: Mayer, K.L. / Shen, G. / Bryant, D. / Lecomte, J. / Falzone, C.J. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1gxi.cif.gz | 338 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1gxi.ent.gz | 284.8 KB | Display | PDB format |
PDBx/mmJSON format | 1gxi.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 1gxi_validation.pdf.gz | 357.8 KB | Display | wwPDB validaton report |
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Full document | 1gxi_full_validation.pdf.gz | 456.1 KB | Display | |
Data in XML | 1gxi_validation.xml.gz | 18.9 KB | Display | |
Data in CIF | 1gxi_validation.cif.gz | 31.3 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/gx/1gxi ftp://data.pdbj.org/pub/pdb/validation_reports/gx/1gxi | HTTPS FTP |
-Related structure data
Similar structure data |
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-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: Protein | Mass: 8022.891 Da / Num. of mol.: 1 / Fragment: N-TERMINAL DOMAIN, PSAE SUBUNIT, RESIDUES 1-73 / Source method: isolated from a natural source / Source: (natural) SYNECHOCYSTIS SP. (bacteria) / Strain: PCC 6803 / References: UniProt: P12975 |
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Compound details | STABILIZES THE INTERACTION BETWEEN PSAC AND THE PSI CORE, ASSISTS THE DOCKING OF THE FERREDOXIN TO ...STABILIZES |
-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||||||||||||||
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NMR experiment |
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-Sample preparation
Sample conditions | pH: 5.3 / Pressure: 1 atm / Temperature: 293 K |
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Crystal grow | *PLUS Method: other / Details: NMR |
-NMR measurement
NMR spectrometer |
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-Processing
NMR software |
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Refinement | Method: simulated annealing / Software ordinal: 1 | ||||||||||||
NMR ensemble | Conformer selection criteria: LEAST ENERGY / Conformers calculated total number: 200 / Conformers submitted total number: 14 |