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Open data
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Basic information
Entry | Database: PDB / ID: 1g8r | ||||||
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Title | MOEA | ||||||
![]() | MOLYBDOPTERIN BIOSYNTHESIS MOEA PROTEIN | ||||||
![]() | METAL BINDING PROTEIN / MOLYBDENUM COFACTOR BIOSYNTHESIS | ||||||
Function / homology | ![]() molybdopterin molybdotransferase / molybdopterin molybdotransferase activity / Mo-molybdopterin cofactor biosynthetic process / protein homodimerization activity / identical protein binding / metal ion binding / cytoplasm / cytosol Similarity search - Function | ||||||
Biological species | ![]() ![]() | ||||||
Method | ![]() ![]() ![]() | ||||||
![]() | Xiang, S. / Nichols, J. / Rajagopalan, K.V. / Schindelin, H. | ||||||
![]() | ![]() Title: The crystal structure of Escherichia coli MoeA and its relationship to the multifunctional protein gephyrin. Authors: Xiang, S. / Nichols, J. / Rajagopalan, K.V. / Schindelin, H. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 165.9 KB | Display | ![]() |
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PDB format | ![]() | 132.2 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 393.1 KB | Display | ![]() |
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Full document | ![]() | 421.2 KB | Display | |
Data in XML | ![]() | 20.4 KB | Display | |
Data in CIF | ![]() | 30.9 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Related structure data | ![]() 1g8lSC S: Starting model for refinement C: citing same article ( |
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Similar structure data |
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Links
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Assembly
Deposited unit | ![]()
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Unit cell |
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Components
#1: Protein | Mass: 44106.059 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) ![]() ![]() #2: Chemical | ChemComp-GOL / #3: Water | ChemComp-HOH / | |
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-Experimental details
-Experiment
Experiment | Method: ![]() |
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Sample preparation
Crystal |
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Crystal grow |
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Crystal grow | *PLUS | ||||||||||||||||||||||||
Components of the solutions | *PLUS
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-Data collection
Diffraction | Mean temperature: 95 K |
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Diffraction source | Source: ![]() ![]() ![]() |
Detector | Type: ADSC QUANTUM 4 / Detector: CCD / Date: Sep 30, 2000 |
Radiation | Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray |
Radiation wavelength | Wavelength: 1.1 Å / Relative weight: 1 |
Reflection | Resolution: 2.6→50 Å / Num. obs: 34006 / % possible obs: 98.2 % / Observed criterion σ(I): -3 / Redundancy: 3.61 % / Biso Wilson estimate: 54.85 Å2 / Rmerge(I) obs: 0.101 / Rsym value: 0.101 / Net I/σ(I): 10.7 |
Reflection shell | Resolution: 2.6→2.69 Å / Redundancy: 3.26 % / Rmerge(I) obs: 0.389 / Mean I/σ(I) obs: 1.39 / Num. unique all: 3148 / Rsym value: 0.389 / % possible all: 92.6 |
Reflection | *PLUS Highest resolution: 2.7 Å / % possible obs: 98.8 % / Redundancy: 3.7 % / Rmerge(I) obs: 0.098 |
Reflection shell | *PLUS % possible obs: 98.6 % / Rmerge(I) obs: 0.309 / Mean I/σ(I) obs: 2.7 |
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Processing
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Refinement | Method to determine structure: ![]() Starting model: PDB ENTRY 1G8L Resolution: 2.65→50 Å / Isotropic thermal model: Isotropic / Cross valid method: THROUGHOUT / σ(F): 0 / Stereochemistry target values: Engh & Huber
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Displacement parameters | Biso mean: 47.163 Å2
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Refinement step | Cycle: LAST / Resolution: 2.65→50 Å
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Software | *PLUS Name: ![]() | |||||||||||||||||||||||||||||||||||||||
Refinement | *PLUS Highest resolution: 2.7 Å / Rfactor Rfree: 0.266 / Rfactor Rwork: 0.212 | |||||||||||||||||||||||||||||||||||||||
Solvent computation | *PLUS | |||||||||||||||||||||||||||||||||||||||
Displacement parameters | *PLUS | |||||||||||||||||||||||||||||||||||||||
Refine LS restraints | *PLUS
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