+Open data
-Basic information
Entry | Database: PDB / ID: 1e4f | ||||||
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Title | FtsA (apo form) from Thermotoga maritima | ||||||
Components | CELL DIVISION PROTEIN FTSA | ||||||
Keywords | BACTERIAL CELL DIVISION / ACTIN FAMILY | ||||||
Function / homology | Function and homology information FtsZ-dependent cytokinesis / cell division site / cytoplasmic side of plasma membrane / cell division / ATP binding / identical protein binding Similarity search - Function | ||||||
Biological species | THERMOTOGA MARITIMA (bacteria) | ||||||
Method | X-RAY DIFFRACTION / SYNCHROTRON / MAD / Resolution: 1.9 Å | ||||||
Authors | van den Ent, F. / Lowe, J. | ||||||
Citation | Journal: Embo J. / Year: 2000 Title: Crystal Structure of the Cell Division Protein Ftsa from Thermotoga Maritima Authors: van den Ent, F. / Lowe, J. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1e4f.cif.gz | 84.7 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1e4f.ent.gz | 67.4 KB | Display | PDB format |
PDBx/mmJSON format | 1e4f.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/e4/1e4f ftp://data.pdbj.org/pub/pdb/validation_reports/e4/1e4f | HTTPS FTP |
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-Related structure data
-Links
-Assembly
Deposited unit |
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1 |
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Unit cell |
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-Components
#1: Protein | Mass: 47075.738 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) THERMOTOGA MARITIMA (bacteria) / Gene: FTSA / Plasmid: PHIS17 / Production host: ESCHERICHIA COLI BL21(DE3) (bacteria) / Variant (production host): C41 / References: UniProt: Q9WZU0 |
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#2: Water | ChemComp-HOH / |
-Experimental details
-Experiment
Experiment | Method: X-RAY DIFFRACTION / Number of used crystals: 1 |
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-Sample preparation
Crystal | Density Matthews: 2.12 Å3/Da / Density % sol: 42 % | ||||||||||||||||||||||||||||||
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Crystal grow | pH: 5.6 Details: 300 MM KCL, 50 MM MES, 5.6, 5% PEG6000, 5-15% PEG400, pH 5.60 | ||||||||||||||||||||||||||||||
Crystal grow | *PLUS Temperature: 18 ℃ / Method: vapor diffusion, sitting drop | ||||||||||||||||||||||||||||||
Components of the solutions | *PLUS
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-Data collection
Diffraction | Mean temperature: 100 K |
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Diffraction source | Source: SYNCHROTRON / Site: ESRF / Beamline: ID14-4 / Wavelength: 0.9393 |
Detector | Date: Feb 15, 2000 |
Radiation | Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray |
Radiation wavelength | Wavelength: 0.9393 Å / Relative weight: 1 |
Reflection | Resolution: 1.9→6 Å / Num. obs: 30124 / % possible obs: 94.8 % / Redundancy: 2.5 % / Biso Wilson estimate: 21.7 Å2 / Rmerge(I) obs: 0.051 / Net I/σ(I): 5.3 |
Reflection shell | Resolution: 1.9→2 Å / Redundancy: 2.4 % / Rmerge(I) obs: 0.164 / Mean I/σ(I) obs: 5.3 / % possible all: 76.8 |
Reflection | *PLUS Rmerge(I) obs: 0.053 |
Reflection shell | *PLUS % possible obs: 76.8 % |
-Processing
Software |
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Refinement | Method to determine structure: MAD / Resolution: 1.9→30 Å / Data cutoff high absF: 0 / Isotropic thermal model: RESTRAINED / Cross valid method: A POSTERIORI / σ(F): 0
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Solvent computation | Solvent model: FLAT MODEL | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Displacement parameters | Biso mean: 26.25 Å2
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Refinement step | Cycle: LAST / Resolution: 1.9→30 Å
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Refine LS restraints |
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LS refinement shell | Resolution: 1.9→1.92 Å / Total num. of bins used: 29
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