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Yorodumi- PDB-1dip: THE SOLUTION STRUCTURE OF PORCINE DELTA-SLEEP-INDUCING PEPTIDE IM... -
+Open data
-Basic information
Entry | Database: PDB / ID: 1dip | ||||||
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Title | THE SOLUTION STRUCTURE OF PORCINE DELTA-SLEEP-INDUCING PEPTIDE IMMUNOREACTIVE PEPTIDE, NMR, 10 STRUCTURES | ||||||
Components | DELTA-SLEEP-INDUCING PEPTIDE IMMUNOREACTIVE PEPTIDE | ||||||
Keywords | ACETYLATION / DELTA-SLEEP-INDUCING PEPTIDE IMMUNOREACTIVE PEPTIDE / LEUCINE ZIPPER / PIG | ||||||
Function / homology | Function and homology information | ||||||
Biological species | Sus scrofa (pig) | ||||||
Method | SOLUTION NMR / SIMULATED ANNEALING, RESTRAINED MOLECULAR DYNAMICS | ||||||
Authors | Roesch, P. / Seidel, G. / Adermann, K. / Schindler, T. / Ejchart, A. / Jaenicke, R. / Forssmann, W.G. | ||||||
Citation | Journal: J.Biol.Chem. / Year: 1997 Title: Solution structure of porcine delta sleep-inducing peptide immunoreactive peptide A homolog of the shortsighted gene product. Authors: Seidel, G. / Adermann, K. / Schindler, T. / Ejchart, A. / Jaenicke, R. / Forssmann, W.G. / Rosch, P. #1: Journal: Eur.J.Biochem. / Year: 1993 Title: A Novel 77-Residue Peptide from Porcine Brain Contains a Leucine-Zipper Motif and is Recognized by an Antiserum to Delta-Sleep-Inducing Peptide Authors: Sillard, R. / Schulz-Knappe, P. / Vogel, P. / Raida, M. / Bensch, K.W. / Forssmann, W.G. / Mutt, V. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1dip.cif.gz | 482.8 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1dip.ent.gz | 405.2 KB | Display | PDB format |
PDBx/mmJSON format | 1dip.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 1dip_validation.pdf.gz | 360.7 KB | Display | wwPDB validaton report |
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Full document | 1dip_full_validation.pdf.gz | 505.8 KB | Display | |
Data in XML | 1dip_validation.xml.gz | 51.4 KB | Display | |
Data in CIF | 1dip_validation.cif.gz | 71.7 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/di/1dip ftp://data.pdbj.org/pub/pdb/validation_reports/di/1dip | HTTPS FTP |
-Related structure data
Similar structure data |
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-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: Protein | Mass: 8748.852 Da / Num. of mol.: 2 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Sus scrofa (pig) / References: UniProt: P80220 Has protein modification | Y | |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR |
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-Sample preparation
Sample conditions | pH: 3.5 / Temperature: 298 K |
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Crystal grow | *PLUS Method: other / Details: NMR |
-NMR measurement
NMR spectrometer | Type: Bruker AMX600 / Manufacturer: Bruker / Model: AMX600 / Field strength: 600 MHz |
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-Processing
Software |
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NMR software |
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Refinement | Method: SIMULATED ANNEALING, RESTRAINED MOLECULAR DYNAMICS / Software ordinal: 1 | ||||||||||||||||
NMR ensemble | Conformer selection criteria: ENERGY, AGREEMENT WITH EXPERIMENTAL DATA Conformers calculated total number: 50 / Conformers submitted total number: 10 |