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Yorodumi- PDB-1cn2: SOLUTION STRUCTURE OF TOXIN 2 FROM CENTRUROIDES NOXIUS HOFFMANN, ... -
+Open data
-Basic information
Entry | Database: PDB / ID: 1cn2 | ||||||
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Title | SOLUTION STRUCTURE OF TOXIN 2 FROM CENTRUROIDES NOXIUS HOFFMANN, A BETA SCORPION NEUROTOXIN ACTING ON SODIUM CHANNELS, NMR, 15 STRUCTURES | ||||||
Components | TOXIN 2 | ||||||
Keywords | NEUROTOXIN / SCORPION TOXIN / CENTRUROIDES NOXIUS / SODIUM CHANNELS | ||||||
Function / homology | Function and homology information sodium channel inhibitor activity / defense response / toxin activity / extracellular region Similarity search - Function | ||||||
Biological species | Centruroides noxius (Mexican scorpion) | ||||||
Method | SOLUTION NMR / simulated annealing | ||||||
Authors | Pintar, A. / Possani, L.D. / Delepierre, M. | ||||||
Citation | Journal: J.Mol.Biol. / Year: 1999 Title: Solution structure of toxin 2 from centruroides noxius Hoffmann, a beta-scorpion neurotoxin acting on sodium channels. Authors: Pintar, A. / Possani, L.D. / Delepierre, M. #1: Journal: Toxicon / Year: 1995 Title: Cloning and Characterization of the Cdnas Encoding Na+ Channel-Specific Toxins 1 and 2 of the Scorpion Centruroides Noxius Hoffmann Authors: Vazquez, A. / Tapia, J.V. / Eliason, W.K. / Martin, B.M. / Lebreton, F. / Delepierre, M. / Possani, L.D. / Becerril, B. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1cn2.cif.gz | 302.4 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1cn2.ent.gz | 261.7 KB | Display | PDB format |
PDBx/mmJSON format | 1cn2.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/cn/1cn2 ftp://data.pdbj.org/pub/pdb/validation_reports/cn/1cn2 | HTTPS FTP |
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-Related structure data
Similar structure data |
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-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: Protein | Mass: 7605.736 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Centruroides noxius (Mexican scorpion) / Secretion: VENOM / References: UniProt: P01495 |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR |
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NMR experiment | Type: NOESY |
NMR details | Text: THE STRUCTURE WAS DETERMINED USING HOMONUCLEAR 1H-1H 2D NMR ON THE NATURAL TOXIN EXTRACTED FROM THE SCORPION VENOM |
-Sample preparation
Details | Contents: H2O/D2O |
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Sample conditions | pH: 4.0 / Pressure: 1 atm / Temperature: 303 K |
Crystal grow | *PLUS Method: other / Details: NMR |
-NMR measurement
NMR spectrometer | Type: Varian UNITY / Manufacturer: Varian / Model: UNITY / Field strength: 500 MHz |
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-Processing
Software |
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NMR software |
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Refinement | Method: simulated annealing / Software ordinal: 1 / Details: SEE JRNL CITATION | |||||||||
NMR ensemble | Conformer selection criteria: LEAST RESTRAINT VIOLATIONS / Conformers calculated total number: 50 / Conformers submitted total number: 15 |