+Open data
-Basic information
Entry | Database: PDB / ID: 1cg7 | ||||||
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Title | HMG PROTEIN NHP6A FROM SACCHAROMYCES CEREVISIAE | ||||||
Components | PROTEIN (NON HISTONE PROTEIN 6 A) | ||||||
Keywords | DNA BINDING PROTEIN / HMG BOX / DNA BENDING / DNA RECOGNITION / CHROMATIN | ||||||
Function / homology | Function and homology information maintenance of transcriptional fidelity during transcription elongation by RNA polymerase III / Mitochondrial transcription initiation / MutSalpha complex binding / protein-DNA complex assembly / RNA polymerase III preinitiation complex assembly / DNA binding, bending / negative regulation of DNA binding / nucleosome binding / RNA polymerase II preinitiation complex assembly / protein-DNA complex ...maintenance of transcriptional fidelity during transcription elongation by RNA polymerase III / Mitochondrial transcription initiation / MutSalpha complex binding / protein-DNA complex assembly / RNA polymerase III preinitiation complex assembly / DNA binding, bending / negative regulation of DNA binding / nucleosome binding / RNA polymerase II preinitiation complex assembly / protein-DNA complex / chromosome / chromatin organization / nucleic acid binding / chromatin remodeling / DNA repair / nucleus Similarity search - Function | ||||||
Biological species | Saccharomyces cerevisiae (brewer's yeast) | ||||||
Method | SOLUTION NMR / DYANA | ||||||
Authors | Allain, F.H.T. / Yen, Y.M. / Masse, J.E. / Schultze, P. / Dieckmann, T. / Johnson, R.C. / Feigon, J. | ||||||
Citation | Journal: EMBO J. / Year: 1999 Title: Solution structure of the HMG protein NHP6A and its interaction with DNA reveals the structural determinants for non-sequence-specific binding. Authors: Allain, F.H. / Yen, Y.M. / Masse, J.E. / Schultze, P. / Dieckmann, T. / Johnson, R.C. / Feigon, J. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1cg7.cif.gz | 891.5 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1cg7.ent.gz | 752.7 KB | Display | PDB format |
PDBx/mmJSON format | 1cg7.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/cg/1cg7 ftp://data.pdbj.org/pub/pdb/validation_reports/cg/1cg7 | HTTPS FTP |
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-Related structure data
Similar structure data |
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-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: Protein | Mass: 10824.364 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Saccharomyces cerevisiae (brewer's yeast) Production host: Escherichia coli (E. coli) / References: UniProt: P11632 |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR |
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NMR experiment | Type: NOESY |
-Sample preparation
Sample conditions | Ionic strength: 100 mM NACL / pH: 5.5 / Temperature: 293 K |
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Crystal grow | *PLUS Method: other / Details: NMR |
-NMR measurement
NMR spectrometer | Manufacturer: Bruker |
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-Processing
NMR software |
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Refinement | Method: DYANA / Software ordinal: 1 | ||||||||||||||||||
NMR ensemble | Conformer selection criteria: LEAST RESTRAINT VIOLATION / Conformers calculated total number: 50 / Conformers submitted total number: 30 |