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- PDB-1bbp: MOLECULAR STRUCTURE OF THE BILIN BINDING PROTEIN (BBP) FROM PIERI... -
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Open data
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Basic information
Entry | Database: PDB / ID: 1bbp | ||||||
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Title | MOLECULAR STRUCTURE OF THE BILIN BINDING PROTEIN (BBP) FROM PIERIS BRASSICAE AFTER REFINEMENT AT 2.0 ANGSTROMS RESOLUTION. | ||||||
![]() | BILIN BINDING PROTEIN | ||||||
![]() | BILIN BINDING | ||||||
Function / homology | ![]() pigment binding / cholesterol binding / response to reactive oxygen species / lipid metabolic process / extracellular region / cytoplasm Similarity search - Function | ||||||
Biological species | ![]() | ||||||
Method | ![]() | ||||||
![]() | Huber, R. / Schneider, M. / Mayr, I. / Mueller, R. / Deutzmann, R. / Suter, F. / Zuber, H. / Falk, H. / Kayser, H. | ||||||
![]() | ![]() Title: Molecular structure of the bilin binding protein (BBP) from Pieris brassicae after refinement at 2.0 A resolution. Authors: Huber, R. / Schneider, M. / Mayr, I. / Muller, R. / Deutzmann, R. / Suter, F. / Zuber, H. / Falk, H. / Kayser, H. #1: ![]() Title: Crystallization, Crystal Structure Analysis and Preliminary Molecular Model of the Bilin Binding Protein from the Insect Pieris Brassicae Authors: Huber, R. / Schneider, M. / Epp, O. / Mayr, I. / Messerschmidt, A. / Pflugrath, J. / Kayser, H. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 152.8 KB | Display | ![]() |
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PDB format | ![]() | 130.3 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 639.3 KB | Display | ![]() |
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Full document | ![]() | 660.5 KB | Display | |
Data in XML | ![]() | 19 KB | Display | |
Data in CIF | ![]() | 28.1 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Similar structure data |
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Links
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Assembly
Deposited unit | ![]()
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Unit cell |
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Noncrystallographic symmetry (NCS) | NCS oper:
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Details | THE TRANSFORMATIONS PRESENTED ON MTRIX RECORDS BELOW RELATE CHAINS A, B, C, AND D AS FOLLOWS: MTRIX 1: A TO B MTRIX 2: A TO C MTRIX 3: A TO D MTRIX 4: B TO C MTRIX 5: B TO D MTRIX 6: C TO D |
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Components
#1: Protein | Mass: 19703.029 Da / Num. of mol.: 4 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() #2: Chemical | ChemComp-BLV / #3: Water | ChemComp-HOH / | |
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-Experimental details
-Experiment
Experiment | Method: ![]() |
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Sample preparation
Crystal | Density Matthews: 3.26 Å3/Da / Density % sol: 62.25 % | ||||||||||||||||||||||||||||||
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Crystal grow | *PLUS pH: 7 / Method: vapor diffusionDetails: referred to 'Huber, R.', (1987) J.Mol.Biol., 195, 423-434 | ||||||||||||||||||||||||||||||
Components of the solutions | *PLUS
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-Data collection
Radiation | Scattering type: x-ray |
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Radiation wavelength | Relative weight: 1 |
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Processing
Software | Name: EREF / Classification: refinement | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Refinement | Rfactor Rwork: 0.2 / Highest resolution: 2 Å | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refinement step | Cycle: LAST / Highest resolution: 2 Å
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Refine LS restraints |
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Refinement | *PLUS Highest resolution: 2 Å / Num. reflection obs: 51824 / Rfactor Rfree: 0.2 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Solvent computation | *PLUS | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Displacement parameters | *PLUS Biso mean: 21 Å2 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refine LS restraints | *PLUS Type: o_angle_d |