+Open data
-Basic information
Entry | Database: PDB / ID: 155c | ||||||
---|---|---|---|---|---|---|---|
Title | THE STRUCTURE OF PARACOCCUS DENITRIFICANS CYTOCHROME C550 | ||||||
Components | CYTOCHROME C550 | ||||||
Keywords | ELECTRON TRANSPORT | ||||||
Function / homology | Function and homology information | ||||||
Biological species | Paracoccus denitrificans (bacteria) | ||||||
Method | X-RAY DIFFRACTION / Resolution: 2.5 Å | ||||||
Authors | Timkovich, R. | ||||||
Citation | Journal: J.Biol.Chem. / Year: 1976 Title: The structure of Paracoccus denitrificans cytochrome c550. Authors: Timkovich, R. / Dickerson, R.E. #1: Journal: J.Biol.Chem. / Year: 1976 Title: Amino Acid Sequence of Paracoccus Denitrificans Cytochrome C550 Authors: Timkovich, R. / Dickerson, R.E. / Margoliash, E. | ||||||
History |
|
-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
---|
-Downloads & links
-Download
PDBx/mmCIF format | 155c.cif.gz | 31.8 KB | Display | PDBx/mmCIF format |
---|---|---|---|---|
PDB format | pdb155c.ent.gz | 22.2 KB | Display | PDB format |
PDBx/mmJSON format | 155c.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/55/155c ftp://data.pdbj.org/pub/pdb/validation_reports/55/155c | HTTPS FTP |
---|
-Related structure data
Similar structure data |
---|
-Links
-Assembly
Deposited unit |
| ||||||||
---|---|---|---|---|---|---|---|---|---|
1 |
| ||||||||
Unit cell |
| ||||||||
Atom site foot note | 1: SIDE CHAIN ATOMS FOR RESIDUES 122 TO 134 ARE NOT INCLUDED BECAUSE THE SEQUENCE IN THIS REGION IS NOT DEFINITIVELY KNOWN. THE RESIDUES HAVE BEEN LABELLED AS UNK. |
-Components
#1: Protein | Mass: 14275.266 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Paracoccus denitrificans (bacteria) / References: UniProt: P00096 |
---|---|
#2: Chemical | ChemComp-HEM / |
Sequence details | SIDE CHAIN ATOMS FOR RESIDUES 122 TO 134 ARE NOT INCLUDED BECAUSE THE SEQUENCE IN THIS REGION IS ...SIDE CHAIN ATOMS FOR RESIDUES 122 TO 134 ARE NOT INCLUDED BECAUSE THE SEQUENCE IN THIS REGION IS NOT DEFINITIVE |
-Experimental details
-Experiment
Experiment | Method: X-RAY DIFFRACTION |
---|
-Sample preparation
Crystal | Density Matthews: 1.94 Å3/Da / Density % sol: 36.55 % |
---|
-Data collection
Radiation | Scattering type: x-ray |
---|---|
Radiation wavelength | Relative weight: 1 |
-Processing
Refinement | Highest resolution: 2.5 Å | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Refinement step | Cycle: LAST / Highest resolution: 2.5 Å
| ||||||||||||
Refinement | *PLUS Highest resolution: 2.5 Å | ||||||||||||
Solvent computation | *PLUS | ||||||||||||
Displacement parameters | *PLUS |