EMDB-44533: High resolution C. elegans 80S ribosome structure

Basic information

Entry

Database: EMDB / ID: EMD-44533

• Title: High resolution C. elegans 80S ribosome structure
• Map data: High resolution C. elegans 80S ribosome structure

Sample

• Complex: Caenorhabditis elegans 80S ribosome
  • Protein or peptide: x 73 types
  • RNA: x 5 types
• RNA: x 1 types
• Ligand: x 2 types

• Keywords: Caenorhabditis elegans / ribosome / high-resolution single-particle analysis / endogenous purified 80S ribosome

Function / homology

Function:

Translesion synthesis by REV1 / Recognition of DNA damage by PCNA-containing replication complex / Translesion Synthesis by POLH / mTORC1-mediated signalling / SRP-dependent cotranslational protein targeting to membrane / SCF(Skp2)-mediated degradation of p27/p21 / Downregulation of TGF-beta receptor signaling / TGF-beta receptor signaling in EMT (epithelial to mesenchymal transition) / SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription / Regulation of PLK1 Activity at G2/M Transition / Regulation of innate immune responses to cytosolic DNA / Autodegradation of the E3 ubiquitin ligase COP1 / ABC-family proteins mediated transport / Degradation of DVL / Regulation of FZD by ubiquitination / N-glycan trimming in the ER and Calnexin/Calreticulin cycle / Hedgehog ligand biogenesis / Hedgehog 'on' state / Translesion synthesis by POLK / Translesion synthesis by POLI / Negative regulation of MAPK pathway / MAPK6/MAPK4 signaling / UCH proteinases / Josephin domain DUBs / DNA Damage Recognition in GG-NER / Gap-filling DNA repair synthesis and ligation in GG-NER / Dual Incision in GG-NER / Major pathway of rRNA processing in the nucleolus and cytosol / CDK-mediated phosphorylation and removal of Cdc6 / Cyclin D associated events in G1 / Ubiquitin Mediated Degradation of Phosphorylated Cdc25A / Formation of a pool of free 40S subunits / Formation of the ternary complex, and subsequently, the 43S complex / GTP hydrolysis and joining of the 60S ribosomal subunit / Ubiquitin-dependent degradation of Cyclin D / PTK6 Regulates RTKs and Their Effectors AKT1 and DOK1 / FBXL7 down-regulates AURKA during mitotic entry and in early mitosis / Regulation of RUNX2 expression and activity / Regulation of RUNX3 expression and activity / Regulation of PTEN stability and activity / ER Quality Control Compartment (ERQC) / Interleukin-1 signaling / Endosomal Sorting Complex Required For Transport (ESCRT) / Protein hydroxylation / Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC) / Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha / Downregulation of ERBB4 signaling / Formation of Incision Complex in GG-NER / E3 ubiquitin ligases ubiquitinate target proteins / Regulation of PTEN localization / Aggrephagy / GSK3B and BTRC:CUL1-mediated-degradation of NFE2L2 / L13a-mediated translational silencing of Ceruloplasmin expression / Stimuli-sensing channels / Orc1 removal from chromatin / Translation initiation complex formation / Ribosomal scanning and start codon recognition / Neddylation / Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) / Metalloprotease DUBs / Downregulation of ERBB2 signaling / Negative regulators of DDX58/IFIH1 signaling / RAS processing / Degradation of beta-catenin by the destruction complex / Regulation of TNFR1 signaling / Formation of TC-NER Pre-Incision Complex / Dual incision in TC-NER / Gap-filling DNA repair synthesis and ligation in TC-NER / Synthesis of active ubiquitin: roles of E1 and E2 enzymes / Iron uptake and transport / KEAP1-NFE2L2 pathway / Antigen processing: Ubiquitination & Proteasome degradation / Downregulation of SMAD2/3:SMAD4 transcriptional activity / Ovarian tumor domain proteases / Negative regulation of MET activity / EGFR downregulation / Cargo recognition for clathrin-mediated endocytosis / Peroxisomal protein import / Regulation of signaling by CBL / Ub-specific processing proteases / Clathrin-mediated endocytosis / polarity specification of anterior/posterior axis / cytoplasmic side of rough endoplasmic reticulum membrane / endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / protein-RNA complex assembly / endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / maturation of LSU-rRNA / rough endoplasmic reticulum / maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / ribosomal large subunit biogenesis / positive regulation of apoptotic signaling pathway / maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / determination of adult lifespan / maturation of SSU-rRNA / small-subunit processome / maintenance of translational fidelity / modification-dependent protein catabolic process / protein tag activity / rRNA processing / ribosome biogenesis

Domain/homology:

Ribosomal protein L30e / Ribosomal protein L23 / : / Ribosomal protein S26e signature. / Ribosomal protein S21e, conserved site / Ribosomal protein S21e signature. / Ribosomal protein S26e / Ribosomal protein S26e superfamily / Ribosomal protein S26e / : / Ribosomal protein S12e signature. / Ribosomal protein S12e / Ribosomal protein L29e / Ribosomal L29e protein family / Ribosomal protein S19e, conserved site / Ribosomal protein S19e signature. / Ribosomal protein S5, eukaryotic/archaeal / Ribosomal protein S21e / Ribosomal protein S21e superfamily / Ribosomal protein S21e / Ribosomal protein L13e, conserved site / Ribosomal protein L13e signature. / Ribosomal protein S2, eukaryotic / S27a-like superfamily / Ribosomal protein L22e / Ribosomal protein L22e superfamily / Ribosomal L22e protein family / Ribosomal protein L10e, conserved site / Ribosomal protein L10e signature. / Ribosomal protein L27e, conserved site / Ribosomal protein L27e signature. / Ribosomal protein L10e / 40S Ribosomal protein S10 / Ribosomal protein L38e / Ribosomal protein L38e superfamily / Ribosomal L38e protein family / : / Ribosomal protein S7e signature. / Ribosomal protein L44e signature. / Plectin/S10, N-terminal / Plectin/S10 domain / : / Ribosomal protein S10, eukaryotic/archaeal / Ribosomal protein L19, eukaryotic / Ribosomal protein L19/L19e conserved site / Ribosomal protein L19e signature. / Ribosomal protein L6e signature. / Ribosomal protein L13e / Ribosomal protein L13e / 60S ribosomal protein L18a/ L20, eukaryotes / Ribosomal protein S25 / S25 ribosomal protein / Ribosomal protein S27a / Ribosomal protein S17e, conserved site / : / Ribosomal protein S27a / Ribosomal protein S17e signature. / Ribosomal protein S27a / Ribosomal protein S3Ae, conserved site / Ribosomal protein S3Ae signature. / Ribosomal protein L44e / Ribosomal protein S30 / Ribosomal protein L44 / Ribosomal protein S30 / Ribosomal protein S2, eukaryotic/archaeal / : / Ribosomal protein L34e, conserved site / Ribosomal protein L34e signature. / Ribosomal protein L5 eukaryotic, C-terminal / Ribosomal L18 C-terminal region / 50S ribosomal protein L18Ae/60S ribosomal protein L20 and L18a / 40S ribosomal protein S29/30S ribosomal protein S14 type Z / Ribosomal L40e family / Ribosomal protein 50S-L18Ae/60S-L20/60S-L18A / 40S ribosomal protein S4, C-terminal domain / Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A / 40S ribosomal protein S4 C-terminus / Ribosomal protein S4e, N-terminal, conserved site / Ribosomal protein S4e signature. / Ribosomal protein L23/L25, N-terminal / Ribosomal protein L23, N-terminal domain / Ribosomal protein S3, eukaryotic/archaeal / Ribosomal_L40e / Ribosomal protein L40e / Ribosomal protein L40e superfamily / Eukaryotic Ribosomal Protein L27, KOW domain / Ribosomal protein 60S L18 and 50S L18e / Ribosomal Protein L6, KOW domain / Ribosomal protein L30e signature 2. / Ribosomal protein L27e / Ribosomal protein S19e / Ribosomal protein S8e, conserved site / Ribosomal protein L27e superfamily / Ribosomal protein S19e / Ribosomal L27e protein family / Ribosomal protein L36e signature. / Ribosomal protein S8e signature. / Ribosomal_S19e / Ribosomal protein S6, eukaryotic / Ribosomal protein L35Ae, conserved site

Component:

Large ribosomal subunit protein eL34 / Small ribosomal subunit protein eS17 / Large ribosomal subunit protein uL30 / Large ribosomal subunit protein eL24 / Plectin/eS10 N-terminal domain-containing protein / Large ribosomal subunit protein uL4 / Large ribosomal subunit protein eL19 / Ribosomal Protein, Small subunit / Large ribosomal subunit protein eL38 / Small ribosomal subunit protein uS13 / Small ribosomal subunit protein eS19 / Large ribosomal subunit protein eL20 / 60S ribosomal protein L29 / Small ribosomal subunit protein eS26 / Large ribosomal subunit protein eL18 / Ribosomal protein L37 / Large ribosomal subunit protein eL21 / Large ribosomal subunit protein uL29 / Ubiquitin-like protein 1-ribosomal protein eS31 fusion protein / Small ribosomal subunit protein uS2 / Large ribosomal subunit protein eL6 / Small ribosomal subunit protein uS11 / Small ribosomal subunit protein uS3 / Small ribosomal subunit protein eS1 / Small ribosomal subunit protein eS8 / Large ribosomal subunit protein uL14 / Large ribosomal subunit protein eL42 / Small ribosomal subunit protein uS7 / Large ribosomal subunit protein eL33 / Large ribosomal subunit protein eL36 / Small ribosomal subunit protein eS12 / Small ribosomal subunit protein eS21 / Large ribosomal subunit protein uL18 / Ubiquitin-ribosomal protein eL40 fusion protein / Large ribosomal subunit protein uL3 / Small ribosomal subunit protein uS5 / Small ribosomal subunit protein uS15 / Large ribosomal subunit protein eL39 / Large ribosomal subunit protein eL22 / Small ribosomal subunit protein eS25 / Small ribosomal subunit protein uS14 / Large ribosomal subunit protein eL13 / Large ribosomal subunit protein eL15 / Large ribosomal subunit protein eL27 / Large ribosomal subunit protein uL16 / Ubiquitin-like domain-containing protein / Large ribosomal subunit protein uL5B / Large ribosomal subunit protein uL24 / Small ribosomal subunit protein uS12 / Small ribosomal subunit protein eS24 / Small ribosomal subunit protein uS17 / Small ribosomal subunit protein uS4 / Large ribosomal subunit protein uL23B / Small ribosomal subunit protein uS9 / 60S ribosomal protein L32 / Small ribosomal subunit protein eS7 / Large ribosomal subunit protein uL13 / Small ribosomal subunit protein uS10 / Small ribosomal subunit protein eS28 / Large ribosomal subunit protein uL6 / Large ribosomal subunit protein eL8 / Large ribosomal subunit protein uL15 / Large ribosomal subunit protein uL22 / Small ribosomal subunit protein eS4 / Small ribosomal subunit protein eS6 / Small ribosomal subunit protein eS27 / Large ribosomal subunit protein eL43 / Large ribosomal subunit protein eL31 / Large ribosomal subunit protein eL14 / Large ribosomal subunit protein uL2 / Small ribosomal subunit protein uS19 / Large ribosomal subunit protein eL30

• Biological species: Caenorhabditis elegans (invertebrata)
• Method: single particle reconstruction / cryo EM / Resolution: 2.63 Å
• Authors: Sehgal E / Serrao VHB / Arribere J

Funding support

United States, 1 items

Organization	Grant number	Country
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)	R01GM131012	United States

• Citation: Journal: RNA / Year: 2024; Title: High-resolution reconstruction of a ribosome sheds light on evolutionary dynamics and tissue specificity.; Authors: Enisha Sehgal / Chloe Wohlenberg / Evan M Soukup / Marcus J Viscardi / Vitor Hugo Balasco Serrão / Joshua A Arribere / ; Abstract: is an important model organism for human health and disease, with foundational contributions to the understanding of gene expression and tissue patterning in animals. An invaluable tool in modern gene expression research is the presence of a high-resolution ribosome structure, though no such structure exists for Here, we present a high-resolution single-particle cryogenic electron microscopy (cryo-EM) reconstruction and molecular model of a ribosome, revealing a significantly streamlined animal ribosome. Many facets of ribosome structure are conserved in , including overall ribosomal architecture and the mechanism of cycloheximide, whereas other facets, such as expansion segments and eL28, are rapidly evolving. We identify uL5 and uL23 as two instances of tissue-specific ribosomal protein paralog expression conserved in , suggesting that ribosomes vary across tissues. The ribosome structure will provide a basis for future structural, biochemical, and genetic studies of translation in this important animal system.

History

Deposition	Apr 19, 2024	-
Header (metadata) release	Sep 4, 2024	-
Map release	Sep 4, 2024	-
Update	Nov 13, 2024	-
Current status	Nov 13, 2024	Processing site: RCSB / Status: Released

Map

• File: Download / File: emd_44533.map.gz / Format: CCP4 / Size: 1.2 GB / Type: IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)
• Annotation: High resolution C. elegans 80S ribosome structure
• Voxel size: X=Y=Z: 0.65 Å

Density

Contour Level	By AUTHOR: 0.182
Minimum - Maximum	-1.1107118 - 1.8663771
Average (Standard dev.)	-0.00031069134 (±0.061436743)

• Symmetry: Space group: 1

Details

EMDB XML:

Map geometry	Axis order X Y Z Origin 0 0 0 Dimensions 680 680 680 Spacing 680 680 680
Cell	A=B=C: 441.99997 Å α=β=γ: 90.0 °

Supplemental data

Additional map: #1

• File: emd_44533_additional_1.map

Half map: Half Map B

• File: emd_44533_half_map_1.map
• Annotation: Half Map B

Half map: Half Map A

• File: emd_44533_half_map_2.map
• Annotation: Half Map A

Sample components

Entire : Caenorhabditis elegans 80S ribosome

• Entire: Name: Caenorhabditis elegans 80S ribosome

Components

• Complex: Caenorhabditis elegans 80S ribosome
  • Protein or peptide: Small ribosomal subunit protein uS3
  • Protein or peptide: Small ribosomal subunit protein eS1
  • Protein or peptide: Small ribosomal subunit protein uS5
  • Protein or peptide: Small ribosomal subunit protein eS4
  • RNA: 5S rRNA
  • RNA: 5.8S rRNA
  • RNA: 18S rRNA
  • RNA: 28S rRNA
  • Protein or peptide: Small ribosomal subunit protein eS17
  • Protein or peptide: Plectin/S10 N-terminal domain-containing protein
  • Protein or peptide: Ribosomal Protein, Small subunit
  • Protein or peptide: Small ribosomal subunit protein uS13
  • Protein or peptide: Small ribosomal subunit protein eS19
  • Protein or peptide: Small ribosomal subunit protein eS26
  • Protein or peptide: Ubiquitin-like protein 1-ribosomal protein eS31 fusion protein
  • Protein or peptide: Small ribosomal subunit protein uS2
  • Protein or peptide: Small ribosomal subunit protein uS11
  • Protein or peptide: Small ribosomal subunit protein eS8
  • Protein or peptide: Small ribosomal subunit protein uS7
  • Protein or peptide: Small ribosomal subunit protein eS12
  • Protein or peptide: Small ribosomal subunit protein eS21
  • Protein or peptide: Small ribosomal subunit protein uS15
  • Protein or peptide: Small ribosomal subunit protein eS25
  • Protein or peptide: Small ribosomal subunit protein uS14
  • Protein or peptide: Small ribosomal subunit protein eS24
  • Protein or peptide: Small ribosomal subunit protein uS10
  • Protein or peptide: Small ribosomal subunit protein eS6
  • Protein or peptide: Small ribosomal subunit protein eS27
  • Protein or peptide: Small ribosomal subunit protein uS19
  • Protein or peptide: Small ribosomal subunit protein eS28
  • Protein or peptide: Ubiquitin-like domain-containing protein
  • Protein or peptide: Small ribosomal subunit protein uS12
  • Protein or peptide: Small ribosomal subunit protein uS17
  • Protein or peptide: Small ribosomal subunit protein uS4
  • Protein or peptide: Small ribosomal subunit protein uS9
  • Protein or peptide: Small ribosomal subunit protein eS7
  • Protein or peptide: Large ribosomal subunit protein uL30
  • Protein or peptide: Large ribosomal subunit protein eL20
  • Protein or peptide: Large ribosomal subunit protein uL14
  • Protein or peptide: Large ribosomal subunit protein uL3
  • Protein or peptide: Large ribosomal subunit protein eL22
  • Protein or peptide: Large ribosomal subunit protein eL13
  • Protein or peptide: Large ribosomal subunit protein uL2
  • Protein or peptide: Large ribosomal subunit protein eL8
  • Protein or peptide: Large ribosomal subunit protein uL16
  • Protein or peptide: Large ribosomal subunit protein uL13
  • Protein or peptide: Large ribosomal subunit protein uL4
  • Protein or peptide: Large ribosomal subunit protein uL29
  • Protein or peptide: Large ribosomal subunit protein eL6
  • Protein or peptide: Large ribosomal subunit protein eL42
  • Protein or peptide: Large ribosomal subunit protein eL33
  • Protein or peptide: Large ribosomal subunit protein eL36
  • Protein or peptide: Large ribosomal subunit protein eL39
  • Protein or peptide: Large ribosomal subunit protein eL15
  • Protein or peptide: Large ribosomal subunit protein uL15
  • Protein or peptide: Large ribosomal subunit protein eL43
  • Protein or peptide: Large ribosomal subunit protein eL14
  • Protein or peptide: Large ribosomal subunit protein eL30
  • Protein or peptide: Large ribosomal subunit protein uL6
  • Protein or peptide: Large ribosomal subunit protein uL24
  • Protein or peptide: Large ribosomal subunit protein eL19
  • Protein or peptide: 60S ribosomal protein L29
  • Protein or peptide: Large ribosomal subunit protein eL18
  • Protein or peptide: Large ribosomal subunit protein eL21
  • Protein or peptide: Large ribosomal subunit protein uL18
  • Protein or peptide: Large ribosomal subunit protein eL27
  • Protein or peptide: Large ribosomal subunit protein uL22
  • Protein or peptide: eL41
  • Protein or peptide: Large ribosomal subunit protein eL34
  • Protein or peptide: Large ribosomal subunit protein eL38
  • Protein or peptide: Ubiquitin-ribosomal protein eL40 fusion protein
  • Protein or peptide: Large ribosomal subunit protein eL31
  • Protein or peptide: Large ribosomal subunit protein eL32
  • Protein or peptide: Large ribosomal subunit protein eL24
  • Protein or peptide: Ribosomal protein L37
  • Protein or peptide: Large ribosomal subunit protein uL5B
  • Protein or peptide: Large ribosomal subunit protein uL23B
  • RNA: tRNA
• RNA: mRNA
• Ligand: SPERMIDINE
• Ligand: 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione

Supramolecule #1: Caenorhabditis elegans 80S ribosome

• Supramolecule: Name: Caenorhabditis elegans 80S ribosome / type: complex / ID: 1 / Parent: 0 / Macromolecule list: #1-#78
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)

Macromolecule #1: Small ribosomal subunit protein uS3

• Macromolecule: Name: Small ribosomal subunit protein uS3 / type: protein_or_peptide / ID: 1 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 27.356756 KDa

Sequence

String:

MAANQNVTKK KKAVIGGIFK AELNNFLMKE LAEDGYSGVE VRSTPARAEV IIMATRTQNV LGERGRRIKE LTSVVQKRFG FEEGSVELY AEKVSNRGLC AVAQCESLRY KLVGGLAVRR ACYGVLRFIM ESGAQGVEVI VSGKLRGQRA KAMKFVDGLM I HSGHPVND YIQQAVRHVQ LRQGVIGIKV KIMLPYDPRG QNGPRNALPD HVQIVEPQEE VLPKEPHSQH KEEKKDVQVP AA QPVAPVQ

UniProtKB: Small ribosomal subunit protein uS3

Macromolecule #2: Small ribosomal subunit protein eS1

• Macromolecule: Name: Small ribosomal subunit protein eS1 / type: protein_or_peptide / ID: 2 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 29.014742 KDa

Sequence

String:

MAVGKNNNKM GKKGGKKKAV DPFSRKEWYD IKAPNMFNTR QVGKTLINRT QGTKIASEGL KGRVFEVSLG DLNNSEADFR KFKLIAEDV QGKNVLTNFH AMSMTHDKLC SIVKKWHTLI EANTAVKTTD GYTLRVFVIA FTKKSVNQVK KTSYTKTSKI R KIRSEMIG CIEKEVTGCD LKEVVSKLIP DSIGKDIEKT CSKLYPLQEV YIRKVKIIKR PKVDLGRLHD LHGDSITVGA DG EKVDRPD DYEPPVQQEV

UniProtKB: Small ribosomal subunit protein eS1

Macromolecule #3: Small ribosomal subunit protein uS5

• Macromolecule: Name: Small ribosomal subunit protein uS5 / type: protein_or_peptide / ID: 3 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 29.011518 KDa

Sequence

String:

MADRGGFQSG FGGRGGGRGG ARPAGDRPAG RGGRGGRGGR GGRGGRAGRG GEKETEWTPV TKLGRLVKEK KITTLEEIYL NSLPIKEFE IIDALCSNLK DEVLKISPVQ KQTTAGQRTR FKAFVAIGDH AGHVGLGVKC SKEVATAIRG AIVAAKLAVV P VRRGYWGN KIGLPHTVPC KVTGKCASVM VRLIPAPRGT GIVSAPVPKK LLHMAGIEDC YTAAKGSTAT LGNFAKATYA AL QRTYSYL TPDLWKEEAL EKSPYQRHHE YLARN

UniProtKB: Small ribosomal subunit protein uS5

Macromolecule #4: Small ribosomal subunit protein eS4

• Macromolecule: Name: Small ribosomal subunit protein eS4 / type: protein_or_peptide / ID: 4 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 29.101016 KDa

Sequence

String:

MRGPKKHLKR LAAPSHWMLD KLGGVFAVRP NPGPHKLRES LPLSLFLRNR LKYALNYTEA KKILTQRVVR VDGKVRTCHK FPTGFMDVV AIERTNEYFR MLYDTKGRYV VHRIQAAEAD FKLCKVKSVR TVNKGVPVLT TTDGRTIRYP DPHVKVNDTI V FNISTQKI TDSVKFEPGN LAYVTGGRNV GRVGIIGHRE RLPGASDIIH IKDSAGHSFA TRISNVFVIG KGNKALVSLP TG AGIRLSI AEERDKRMAQ KH

UniProtKB: Small ribosomal subunit protein eS4

Macromolecule #9: Small ribosomal subunit protein eS17

• Macromolecule: Name: Small ribosomal subunit protein eS17 / type: protein_or_peptide / ID: 9 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 14.966238 KDa

Sequence

String:

MSRVRTKTVK KASRVLIEKY YTRMTNDFHN NKRVCDEVAI IGSKPLRNKI AGYITHLMRR IERGPVRGIS IKLQEEERER RDNYMPEIS TVDPSQLTSI KVDTDTSDML KAAGFNLPNV TVEDQGKNKG K

UniProtKB: Small ribosomal subunit protein eS17

Macromolecule #10: Plectin/S10 N-terminal domain-containing protein

• Macromolecule: Name: Plectin/S10 N-terminal domain-containing protein / type: protein_or_peptide / ID: 10 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 16.897299 KDa

Sequence

String:

MFIPKSHTKL IYEYLFNEGV TVAKKDFNAK THPNIEGVSN LEVIKTLKSL ASRELVKEQF AWRHYYWYLT DAGILYLREY LALPAEIVP ATIKTKPREI RVPHEDRAPR AAQGEKGDRE AYRTEKVTEA GPGGAPVYRA GFGRGAPPPQ

UniProtKB: Plectin/eS10 N-terminal domain-containing protein

Macromolecule #11: Ribosomal Protein, Small subunit

• Macromolecule: Name: Ribosomal Protein, Small subunit / type: protein_or_peptide / ID: 11 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 14.758379 KDa

Sequence

String:

MVRMNVLADA LNAINNAEKR GKRQVLIRPA SKVIVRFLTV MMKHGYIGEF EIVDDHRAGK IVVNLTGRLN KASVISPRLN IRLNDLEKY TNTLLPSRQF GYLILTTSAG IMDHEEARRK HLGGKILGFF F

UniProtKB: Ribosomal Protein, Small subunit

Macromolecule #12: Small ribosomal subunit protein uS13

• Macromolecule: Name: Small ribosomal subunit protein uS13 / type: protein_or_peptide / ID: 12 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 17.809785 KDa

Sequence

String:

MSLIIPEKFQ HIHRVMNTNI DGNRKVPYAL TAIKGVGRRF AFVCCRKADV DVNKRAGELT EEDFDKIVTI MQNPSQYKIP NWFLNRQKD IKDGKTGQLL STAVDNKLRE DLERMKKIRL HRGLRHYWGL RVRGQHTKTT GRKGRTVGVS KKKGG

UniProtKB: Small ribosomal subunit protein uS13

Macromolecule #13: Small ribosomal subunit protein eS19

• Macromolecule: Name: Small ribosomal subunit protein eS19 / type: protein_or_peptide / ID: 13 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 16.355862 KDa

Sequence

String:

MTRATSIKDV DQHEATKSIA HFLKKSGKVK VPEWSDLVKL GVNKELAPVD PDWFYTRAAS LARHLYFRPA GIGAFKKVYG GNKRRGVAP NHFQTSAGNC LRKAVQQLEK IKWVEKHPDG KGRILSKQGR KDLDRIATSL RSSGQQA

UniProtKB: Small ribosomal subunit protein eS19

Macromolecule #14: Small ribosomal subunit protein eS26

• Macromolecule: Name: Small ribosomal subunit protein eS26 / type: protein_or_peptide / ID: 14 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 13.282554 KDa

Sequence

String:

MTFKRRNHGR NKKNRGHVAF IRCTNCGRCC PKDKAIKKFV VRNIVEAAAV RDIGDASAYT QYALPKLYHK LHYCIACAIH SKVVRNRSR EARRDRNPPP RFGQRAAAAR PGAPGPRP

UniProtKB: Small ribosomal subunit protein eS26

Macromolecule #15: Ubiquitin-like protein 1-ribosomal protein eS31 fusion protein

• Macromolecule: Name: Ubiquitin-like protein 1-ribosomal protein eS31 fusion protein; type: protein_or_peptide / ID: 15 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 18.135129 KDa

Sequence

String:

MVFVKTLHRT LFLEVAANED VLSIKQKIEA AEGIPAEEQR LCYAGRQLED SDCGIDSEAT IYVNLELLGG AKKRKKKVYT TPKKNKRKP KKVKLAVLKY YKIDENGKIT RLRKECQQPS CGGGVFMAQH ANRHYCGRCH DTLVVDTATA AATSGEKGGK K GKK

UniProtKB: Ubiquitin-like protein 1-ribosomal protein eS31 fusion protein

Macromolecule #16: Small ribosomal subunit protein uS2

• Macromolecule: Name: Small ribosomal subunit protein uS2 / type: protein_or_peptide / ID: 16 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 30.73575 KDa

Sequence

String:

MSGGAAHSAL TEEDVMKLLA TQAHLGSTNL NFQMQQYVYK RRFDGPNIIN VKKTWEKLLL AARAIAAVEN PADVVVVSAR PYAQRALLK FAAHTGATAI FGRFSPGCLT NQIQKTFKEP RLLVISDPRI DHQAVTEASY VGVPVISFVN TESPLKLIDI G VPCNNKGE RSIGLMWWML AREILILRGK ISRQTGFVLE GKEIMPDLYF YRDPTETEKE ETGAHADVAE AQEYQQPTDI DF TTQGGKV DDWAAETATW TAETKTTEEW ANAPTQSNW

UniProtKB: Small ribosomal subunit protein uS2

Macromolecule #17: Small ribosomal subunit protein uS11

• Macromolecule: Name: Small ribosomal subunit protein uS11 / type: protein_or_peptide / ID: 17 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 16.278818 KDa

Sequence

String:

MAPARKGKAK EEQAVVSLGP QAKEGELIFG VAHIFASFND TFVHITDISG RETIVRVTGG MKVKADRDES SPYAAMLAAQ DVADRCKQL GINALHIKLR ATGGTRTKTP GPGAQSALRA LARAGMKIGR IEDVTPIPSD CTRRKGGRRG RRL

UniProtKB: Small ribosomal subunit protein uS11

Macromolecule #18: Small ribosomal subunit protein eS8

• Macromolecule: Name: Small ribosomal subunit protein eS8 / type: protein_or_peptide / ID: 18 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 23.800426 KDa

Sequence

String:

MGISRDSWHK RYKTGATQPV PHKKRKFELG RPAANTKIGA HRVRLVRTRG GNEKYRALRL DSGNFSWASE QTTRKTRIVD TMYNATNNE LVRTKTLVKG AIISVDAAPF RQWYEAHYAL PLARKKNAKL SEEDNAILNK KRSHHTMKKY TERQKTAAVD A LLIEQFNT GRLLARISSS PGQVGQANGY ILEGKELDFY LRKIRAKKAK

UniProtKB: Small ribosomal subunit protein eS8

Macromolecule #19: Small ribosomal subunit protein uS7

• Macromolecule: Name: Small ribosomal subunit protein uS7 / type: protein_or_peptide / ID: 19 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 23.18973 KDa

Sequence

String:

MADNWGSENV VADAAPATEA PEVALFGKWS LQSVNVSDIS LVDYIPVKEK SAKYLPHSAG RFQVRRFRKA ACPIVERLAN SLMMHGRNN GKKLMTVRIV KHAFEIIYLL TGENPVQVLV NAVINSGPRE DSTRIGRAGT VRRQAVDVAP LRRVNQAIWL L CTGAREAA FRNVKTIAEC LADELINAAK GSSNSYAIKK KDELERVAKS NR

UniProtKB: Small ribosomal subunit protein uS7

Macromolecule #20: Small ribosomal subunit protein eS12

• Macromolecule: Name: Small ribosomal subunit protein eS12 / type: protein_or_peptide / ID: 20 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 15.092263 KDa

Sequence

String:

MSDAGGDVQV APAAVAQGPM DKEGALRAVL RAAHHADGLA KGLHETCKAL DKREAHFCVL AENCDEPQYV KLVETLCAEH QIPLIKVAD KKIIGEYCGL CKYDKEGKAR KVVGCSSAVV TNWGNEEQGR AILTDYFASK N

UniProtKB: Small ribosomal subunit protein eS12

Macromolecule #21: Small ribosomal subunit protein eS21

• Macromolecule: Name: Small ribosomal subunit protein eS21 / type: protein_or_peptide / ID: 21 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 9.688956 KDa

Sequence

String:

MQNDAGQTVE LYVPRKCSSS NRIIGPKDHA SVQIDFVDVD PETGRMIPGK STRYAICGAI RRMGESDDAI LRLAQKDGLV PRDDVKSN

UniProtKB: Small ribosomal subunit protein eS21

Macromolecule #22: Small ribosomal subunit protein uS15

• Macromolecule: Name: Small ribosomal subunit protein uS15 / type: protein_or_peptide / ID: 22 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 17.354521 KDa

Sequence

String:

MGRMHNPGKG MAKSAIPYRR SVPSWQKMTA EEVQDQIVKM AKKGLRPSQI GVILRDSHGV GQVRRLAGNK IFRILKSKGM APELPEDLY HLVKKAVAIR KHLERSRKDI DSKYRLILVE SRIHRLARYY KTKRQLPPTW KYESGTAASL VS

UniProtKB: Small ribosomal subunit protein uS15

Macromolecule #23: Small ribosomal subunit protein eS25

• Macromolecule: Name: Small ribosomal subunit protein eS25 / type: protein_or_peptide / ID: 23 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 12.943363 KDa

Sequence

String:

MPPKKDPKGG KAPPSKKKEG SGGGKAKKKK WSKGKVRDKL NNMVLFDQAT YDKLYKEVIT YKLITPSVVS ERLKVRASLA KAGLKELQA KGLVKCVVHH HGQVVYTRAT KEADVIVE

UniProtKB: Small ribosomal subunit protein eS25

Macromolecule #24: Small ribosomal subunit protein uS14

• Macromolecule: Name: Small ribosomal subunit protein uS14 / type: protein_or_peptide / ID: 24 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 6.568698 KDa

Sequence

String:

MGFQNLWFSH PRKFGPGSRS CRVCAGHHGL IRKYGLDLCR RCFREQARDI GFKKLD

UniProtKB: Small ribosomal subunit protein uS14

Macromolecule #25: Small ribosomal subunit protein eS24

• Macromolecule: Name: Small ribosomal subunit protein eS24 / type: protein_or_peptide / ID: 25 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 14.908854 KDa

Sequence

String:

MGDVVTIRTR KVLTNKLLYR KQMVVEVIHP GRPTVPKADI REKIAKLYKT TPDTVIPFGF ESKIGGGKSK GFALVYDTID FAKKFEPKY RLVRMGLATK VEKPGRKQRK ERKNRQKKVR GTAKAKVSAG KK

UniProtKB: Small ribosomal subunit protein eS24

Macromolecule #26: Small ribosomal subunit protein uS10

• Macromolecule: Name: Small ribosomal subunit protein uS10 / type: protein_or_peptide / ID: 26 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 13.258502 KDa

Sequence

String:

MAVAFKNEKA ITDNSEHRIR LTLTSQNVKP LEKVCAQLID GAKNEHLIVK GPIRMPTKVL RITTRKTPCG EGSKTWDRFQ MRIHKRLIN LHAPAEVLRQ ITSISIEPGV DIEVTRAD

UniProtKB: Small ribosomal subunit protein uS10

Macromolecule #27: Small ribosomal subunit protein eS6

• Macromolecule: Name: Small ribosomal subunit protein eS6 / type: protein_or_peptide / ID: 27 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 28.201027 KDa

Sequence

String:

MRLNFAYPAT GLQKSFEVDE EKKLRLFFEK RMSQEVAIDA LGDEWKGYVV RIGGGNDKQG FPMKQGILTN GRVRLLLKKG QSCYRERKN GERKRKSVRG CIVDANMSAL SLVIVKKGDG EIEGLTDSVL PRKLGPKRAS KIRKLFNLTK HDDVTKYVIT H DKTFPDGV TKTIAPKIQR LITPARIARK KYLLRQKRNQ KIKMRDDAAA YHKLLAKYSK EEHDAKIARR RSSASHHSES EV KKTSKK

UniProtKB: Small ribosomal subunit protein eS6

Macromolecule #28: Small ribosomal subunit protein eS27

• Macromolecule: Name: Small ribosomal subunit protein eS27 / type: protein_or_peptide / ID: 28 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 9.364134 KDa

Sequence

String:

MPLAVDLLHP EPQREIRCHK LKRLVQHPNS YFMDVKCSGC FKISTVFSHA TTVVVCVGCN TVLCQPTRGK AKLTEGCSFR KKQ

UniProtKB: Small ribosomal subunit protein eS27

Macromolecule #29: Small ribosomal subunit protein uS19

• Macromolecule: Name: Small ribosomal subunit protein uS19 / type: protein_or_peptide / ID: 29 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 17.279635 KDa

Sequence

String:

MATQDDAHLA ELKKKRTFRK FMYRGVDLDQ LLDMSREQFT KLLPCRMRRR LDRGLKRKHL ALIAKVQKAK KAAGVLEKPA TVKTHLRDM IILPELVGGV IGIYNGKVFN QTEIKPEMIG FYLGEFAISY KPVKHGRPGI GATHSSRFIP LK

UniProtKB: Small ribosomal subunit protein uS19

Macromolecule #30: Small ribosomal subunit protein eS28

• Macromolecule: Name: Small ribosomal subunit protein eS28 / type: protein_or_peptide / ID: 30 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 7.449564 KDa

Sequence

String:

MDKLTLARVT KVIGRTGSQG QCTQVRVEFI NDQNNRSIIR NVKGPVREGD ILTLLESERE ARRLR

UniProtKB: Small ribosomal subunit protein eS28

Macromolecule #31: Ubiquitin-like domain-containing protein

• Macromolecule: Name: Ubiquitin-like domain-containing protein / type: protein_or_peptide / ID: 31 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 14.058087 KDa

Sequence

String:

MQIFLLGLDN TTHTLDVDAS TTLSAIKGVI GAGEEFSISY GSKVLSEELT LGECQIESLS TLSVNGRLLG GKVHGSLARA GKVRAQTPK VDKQDKKKKK RGRAFRRVQY TRRYVNVASG PGKKRGPNSN S

UniProtKB: Ubiquitin-like domain-containing protein

Macromolecule #32: Small ribosomal subunit protein uS12

• Macromolecule: Name: Small ribosomal subunit protein uS12 / type: protein_or_peptide / ID: 32 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 15.909646 KDa

Sequence

String:

MGKPKGLCTA RKLKTHRQEQ RWNDKRYKKA HIGTRWKSNP FGGASHAKGI VLEKIGVEAK QPNSAIRKCV RVQLIKNGKK ITAFVPNDG CLNFVEENDE VLVSGFGRSG HAVGDIPGVR FKIVKVANTS LIALFKGKKE RPRS

UniProtKB: Small ribosomal subunit protein uS12

Macromolecule #33: Small ribosomal subunit protein uS17

• Macromolecule: Name: Small ribosomal subunit protein uS17 / type: protein_or_peptide / ID: 33 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 17.782957 KDa

Sequence

String:

MSEQTERAFL KQPTVNLNNK ARILAGSKKT PRYIREVGLG FKAPRDAVEG TYIDKKCPWA GNVPIRGMIL TGVVLKNKMT RTIVVRRDY LHYIKKYRRY EKRHKNVPAH CSPAFRDIHP GDLVTIGECR PLSKTVRFNV LKVNKSGTSK KGFSKF

UniProtKB: Small ribosomal subunit protein uS17

Macromolecule #34: Small ribosomal subunit protein uS4

• Macromolecule: Name: Small ribosomal subunit protein uS4 / type: protein_or_peptide / ID: 34 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 22.006891 KDa

Sequence

String:

MARLKTVQSK VTKSPRRPFE KERLDQELKL IGTFGLKNKR EVWRVKYTLA KVRKAARELL TLEDKDPKRL FEGNALLRRL VKIGVLDET KMKLDYVLGL KVEDFLERRL QTQVFKLGLA KSIHHARILI KQHHIRVRRQ VVDVPSFIVR LDSQKHIDFS L QSPYGGGR PGRVKRRTLR KGDGAGGDDE E

UniProtKB: Small ribosomal subunit protein uS4

Macromolecule #35: Small ribosomal subunit protein uS9

• Macromolecule: Name: Small ribosomal subunit protein uS9 / type: protein_or_peptide / ID: 35 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 16.348045 KDa

Sequence

String:

MTSTVQSVQT FGRKKTATAV AHCKKGQGLI KVNGRPLEFL EPQILRIKLQ EPLLLVGKER FQDVDIRIRV SGGGHVAQIY AVRQALAKA LVAYYHKYVD EQSKRELKNI FAAYDKSLLV ADPRRRESKK FGGPGARARY QKSYR

UniProtKB: Small ribosomal subunit protein uS9

Macromolecule #36: Small ribosomal subunit protein eS7

• Macromolecule: Name: Small ribosomal subunit protein eS7 / type: protein_or_peptide / ID: 36 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 22.100965 KDa

Sequence

String:

MPEIIGKLLK SDGKVVSEIE KQVSQALIDL ETNDDVQSQL KELYIVGVKE VELGNKSAII IYVPVPQLKA FHKIHPALVR ELEKKFGGR DILILAKRRI LPKPQRGSKA RPQKQKRPRS RTLTAVHDAW LDELVYPAEV VGRRIRVKLD GKKVYKVHLD K SHQTNVGH KIGVFASVYR KLTGKDVTFE FPDPIF

UniProtKB: Small ribosomal subunit protein eS7

Macromolecule #37: Large ribosomal subunit protein uL30

• Macromolecule: Name: Large ribosomal subunit protein uL30 / type: protein_or_peptide / ID: 37 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 28.185742 KDa

Sequence

String:

MAPTKKVPQV PETVLKRRKQ RADARTKAAQ HKVTVAAKNK EKKTQYFKRA EKYVQEYRNA QKEGLRLKRE AEAKGDFYVP AEHKVAFVV RIRGINQLHP KPRKALQILR LRQINNGVFV KLNKATLPLL RIIEPYVAWG YPNNKTIHDL LYKRGYAKVD G NRVPITDN TIVEQSLGKF NIICLEDLAH EIATVGPHFK EATNFLWPFK LNNPTGGWTK KTNHFVEGGD FGNREDQINN LL RKMV

UniProtKB: Large ribosomal subunit protein uL30

Macromolecule #38: Large ribosomal subunit protein eL20

• Macromolecule: Name: Large ribosomal subunit protein eL20 / type: protein_or_peptide / ID: 38 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 21.001479 KDa

Sequence

String:

MPTKALGETL NEYVVVGRKI PTEKEPVTPI WKMQIFATNH VIAKSRFWYF VSMLRRVKKA NGEILSIKQV FEKNPGTVKN YGVWLKYDS RTGHHNMYRE YRDTTVAGAV TQCYRDMGAR HRAQADRIHI LKVQTVKAED TKRAGIKMFH DAKIRFPLPH R VTKRKNLS VFTTARQNTH FA

UniProtKB: Large ribosomal subunit protein eL20

Macromolecule #39: Large ribosomal subunit protein uL14

• Macromolecule: Name: Large ribosomal subunit protein uL14 / type: protein_or_peptide / ID: 39 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 14.979563 KDa

Sequence

String:

MSKRGRGGAS GAKFRISLGL PVGAVMNCAD NTGAKNLFVI SVYGIRGRLN RLPSAGVGDM FVCSVKKGKP ELRKKVLQGV VIRQRKQFR RKDGTFIYFE DNAGVIVNNK GEMKGSAITG PVAKECADLW PRIAANAGSI A

UniProtKB: Large ribosomal subunit protein uL14

Macromolecule #40: Large ribosomal subunit protein uL3

• Macromolecule: Name: Large ribosomal subunit protein uL3 / type: protein_or_peptide / ID: 40 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 45.75927 KDa

Sequence

String:

MSHRKFSAPR HGHMGFTPKK RSRTYRGRIK AFPKDDKSKP IHLTAFLGYK AGMTHIVRDV DKPGSKVNKK EVVEAVTIVE TPPMVIAGV TGYVDTPQGP RALTTIWAEH LSEEARRRFY SNWAKSKKKA FTKYAKKWQD EDGKKLIEAD FAKLKKYCSS I RVIAHTQM KILRRRQKKA HLVEIQVNGG TIEQKVDWAR EHLEKQVQVD TVFAQDEMID TIGVTRGHGF KGVTSRWHTK KL PRKTHKG LRKVACIGAW HPSRVAFTVA RAGQKGFHHR TIINNKIYRI GKSALTEEGK NNGSTEFDLT QKTITPMGGF PRY GIVNQD YIMLRGAVLG PKKRLITLRK SLITQTKRVA HEKINLKWID TSSKTGHGRF QTTAEKRAFM GKLKRDFLAE AEAK A

UniProtKB: Large ribosomal subunit protein uL3

Macromolecule #41: Large ribosomal subunit protein eL22

• Macromolecule: Name: Large ribosomal subunit protein eL22 / type: protein_or_peptide / ID: 41 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 14.97943 KDa

Sequence

String:

MVPKPHAKSA KKALRKKKVH LKFNVECKNP VEDGILRIED LEAFLNEKIK VNGKTGHLAA NNVKVEVAKS KVSVVSEVPF SKRYLKYLT KKYLKRNSLR DWLRVVAVNK NTYEVRYFHI NDGEDAGSDH E

UniProtKB: Large ribosomal subunit protein eL22

Macromolecule #42: Large ribosomal subunit protein eL13

• Macromolecule: Name: Large ribosomal subunit protein eL13 / type: protein_or_peptide / ID: 42 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 23.809732 KDa

Sequence

String:

MAPRGNQMLG NAHFRKHWHK RIKTWFDQPA RKLRRRQNRQ AKAVEIAPRP VAGLLRSVVR CPQKRYNTKT RLGRGFSLQE LKAAGISQA QARTIGIAVD VRRTNKTAEG LKANADRLKE YKAKLILFPK KASAPKKGDS SAEELKVAAQ LRGDVLPLSH T ITFDEPRQ VTDAERKVEI FRLLRKERAD KKYRGKREKR AREAAEENK

UniProtKB: Large ribosomal subunit protein eL13

Macromolecule #43: Large ribosomal subunit protein uL2

• Macromolecule: Name: Large ribosomal subunit protein uL2 / type: protein_or_peptide / ID: 43 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 28.267883 KDa

Sequence

String:

MGRRIRIQRK GAGGIFKSHN KHRKGASKLR PLDYAERHGY IKGLVKDIIH DPGRGAPLAI IAFRDPYKYK TVKTTVVAAE GMHTGQFIH CGAKAQIQIG NIVPVGTLPE GTTICNVENK SGDRGVIARA SGNYATVIAH NPDTKKTRIR LPSGAKKVVQ S VNRAMIGL VAGGGRTDKP LLKAGRSYHK YKAKRNSWPR VRGVAMNPVE HPHGGGNHQH IGHPSTVRRD ASAGKKVGLI AA RRTGRIR GGKPVKFTKE ENV

UniProtKB: Large ribosomal subunit protein uL2

Macromolecule #44: Large ribosomal subunit protein eL8

• Macromolecule: Name: Large ribosomal subunit protein eL8 / type: protein_or_peptide / ID: 44 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 30.240455 KDa

Sequence

String:

MPSKKVIKKK VAAVPAHIRA QTQVQKEVKN PLFEKRARNF NIGQDIQPKK DVTRFVKWPK YIRLQRQSAI LQKRLKVPPT INQFRTALD SQSARQAFKL LDKYRPESTE AKKNRLRARA EARAAGKKEE VTKRPNTVRH GVNTITRLVE TRRAQLVLIA H DVNPLEIV LHLPALCRKY NVPYAIIKGK ASLGTVVRRK TTAAVALVDV NPEDKSALNK LVETVNNNFS ERHEEIRKHW GG GVMSAKS DAKKLKIERA RARDLGKL

UniProtKB: Large ribosomal subunit protein eL8

Macromolecule #45: Large ribosomal subunit protein uL16

• Macromolecule: Name: Large ribosomal subunit protein uL16 / type: protein_or_peptide / ID: 45 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 24.800971 KDa

Sequence

String:

MGRRPARCYR YIKNKPYPKS RFCRGVPDAK IRIFDLGNKR ANVDTFPACV HMMSNEREHL SSEALEAARI CANKYMVKNC GKDGFHLRV RKHPFHVTRI NKMLSCAGAD RLQTGMRGAY GKPQGLVARV DIGDILFSMR IKEGNVKHAI EAFRRAKFKF P GRQIIVSS RKWGFTKWDR EDYERMRAEG RLRSDGVGVQ LQREHGPLTK WIENPI

UniProtKB: Large ribosomal subunit protein uL16

Macromolecule #46: Large ribosomal subunit protein uL13

• Macromolecule: Name: Large ribosomal subunit protein uL13 / type: protein_or_peptide / ID: 46 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 23.044293 KDa

Sequence

String:

MGLSNRAIII DGKNHLLGRL ASIVAKKLLQ GDKVVVLRAE EIVISGNFHR SKLKYMSFLR KRCNINPARG AFHYRAPGKI FWRTVRGML PHKTNRGNEA LKNLRAYEGV PAKYQKTKSL HAPSASRFRL QPRRKFCVVG RLSHEVGWQF QDVVAKLEAK R KVKGAAYF EQKKKMDKLA VQAKKNAAPK IAQYQKIIEA LGYN

UniProtKB: Large ribosomal subunit protein uL13

Macromolecule #47: Large ribosomal subunit protein uL4

• Macromolecule: Name: Large ribosomal subunit protein uL4 / type: protein_or_peptide / ID: 47 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 38.735199 KDa

Sequence

String:

MAARPLVTVY DEKYEATQSQ IRLPAVFRTP IRPDLVSFIA DQVRRNRRQA HAVNTKAGKQ HSAESWGTGR AVARIPRVRG GGTHRSGQG AFGNMCRGGH MFAPLKVFRR WHRNVNIAQK RYAVSSAIAA SGIPALLQAR GHVIDQVAEV PLVVSDKVES F RKTKEAVV FLRRSHLWAD IEKVYNSKRN RAGKGKLRNR QHKQKLGPVV IYGQDAECAR AFRNIPGVDV MNVERLNLLK LA PGGHLGR LIIWTESAFK KLDTIYGTTV ANSSQLKKGW SVPLPIMANS DFSRIIRSEE VVKAIRAPKK NPVLPKVHRN PLK KRTLLY KLNPYASILR KASKANVKK

UniProtKB: Large ribosomal subunit protein uL4

Macromolecule #48: Large ribosomal subunit protein uL29

• Macromolecule: Name: Large ribosomal subunit protein uL29 / type: protein_or_peptide / ID: 48 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 14.232995 KDa

Sequence

String:

MTKLKCKSLR GEKKDALQKK LDEQKTELAT LRVSKVTGGA ASKLSKIRVV RKNIARLLTV INQTQKQELR KFYADHKYKP IDLRLKKTR AIRRRLTAHE LSLRSAKQQA KSRNQAVRKF AVKA

UniProtKB: Large ribosomal subunit protein uL29

Macromolecule #49: Large ribosomal subunit protein eL6

• Macromolecule: Name: Large ribosomal subunit protein eL6 / type: protein_or_peptide / ID: 49 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 24.364846 KDa

Sequence

String:

MVGKRNLPVI SRNFDLSPGV LRFSASRLRL KKGEKKPKFT KDTSAKLPKL QRNGTKFALG HSKTVTLRKT LTPGTVLIVL AGRHKGKRV VFLKQLPQSG LLLVTGPHKI NGFPLRRIGQ AFVIATSLKV NVSGVKIPEH INDEYFKRKS TAQKTGKNIF A SGKTEYTV SEQRKKDIKT VDAPILAAIK KHPEHKFLFG YLGTRFSLGK NQYPHKMQF

UniProtKB: Large ribosomal subunit protein eL6

Macromolecule #50: Large ribosomal subunit protein eL42

• Macromolecule: Name: Large ribosomal subunit protein eL42 / type: protein_or_peptide / ID: 50 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 12.403816 KDa

Sequence

String:

MVNVPKARRT FCDGKCRKHT NHKVTQYKKG KESKFAQGRR RYDRKQSGFG GQTKPIFRKK AKTTKKIVLR MECTECKHKK QLPIKRCKH FELGGQKKSR GQVIQF

UniProtKB: Large ribosomal subunit protein eL42

Macromolecule #51: Large ribosomal subunit protein eL33

• Macromolecule: Name: Large ribosomal subunit protein eL33 / type: protein_or_peptide / ID: 51 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 13.797059 KDa

Sequence

String:

MADTAVARRP SAPTTGRLYV KAIFTGFKRG LRTQSEHTSL LKLEGVFNKE DAGFYAGKRV VYLYKAHNKT LKTGHTVATR TRAIWGKIT RPHGNAGAVR AKFHHNIPPS ALGKRIRVLL YPSNI

UniProtKB: Large ribosomal subunit protein eL33

Macromolecule #52: Large ribosomal subunit protein eL36

• Macromolecule: Name: Large ribosomal subunit protein eL36 / type: protein_or_peptide / ID: 52 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 11.916182 KDa

Sequence

String:

MSGPGIEGLA VGLNKGHAAT QLPVKQRQNR HKGVASKKTK IVRELVREIT GFAPYERRVL EMLRISKDKR ALKFLKRRIG THRRAKGKR EELQNVIIAQ RKAHK

UniProtKB: Large ribosomal subunit protein eL36

Macromolecule #53: Large ribosomal subunit protein eL39

• Macromolecule: Name: Large ribosomal subunit protein eL39 / type: protein_or_peptide / ID: 53 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 6.347822 KDa

Sequence

String:

MSALKKSFIK RKLAKKQKQN RPMPQWVRMK TGNTMKYNAK RRHWRRTKLK L

UniProtKB: Large ribosomal subunit protein eL39

Macromolecule #54: Large ribosomal subunit protein eL15

• Macromolecule: Name: Large ribosomal subunit protein eL15 / type: protein_or_peptide / ID: 54 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 24.187182 KDa

Sequence

String:

MGAYKYMQEI WRKKQSDALR YLLRIRTWHY RQLSAVHRVP RPTRPEKARR LGYRAKQGFV VYRVRVRRGN RKRPVCKGQT YGKPKTHGV NELKNAKSKQ AVAEGRAGRR LGSLRVLNSY WVAEDSTYKF YEVVLIDPFH KAIRRNPDTQ WITKPVHKHR E QRGLTSAG RKSRGLGKGW RFSATRGGSQ AKNWKRKNTK VFHRKR

UniProtKB: Large ribosomal subunit protein eL15

Macromolecule #55: Large ribosomal subunit protein uL15

• Macromolecule: Name: Large ribosomal subunit protein uL15 / type: protein_or_peptide / ID: 55 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 16.245005 KDa

Sequence

String:

MAHALRKTRK LRGHVSHGHG RIGKHRKHPG GRGNAGGQHH HRINRDKYHP GYFGKVGMRV FHLNKNQHYC PTVNVERLWS LVPQEVRDK ATGGKSPVID CTKLGYFKVL GKGLLPETPL IVKARFFSHE AEQKIKKAGG ACVLVA

UniProtKB: Large ribosomal subunit protein uL15

Macromolecule #56: Large ribosomal subunit protein eL43

• Macromolecule: Name: Large ribosomal subunit protein eL43 / type: protein_or_peptide / ID: 56 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 10.126079 KDa

Sequence

String:

MAKRTKKVGI VGKYGTRYGA SLRKMAKKLE VAQHSRYTCS FCGKEAMKRK ATGIWNCAKC HKVVAGGAYV YGTVTAATVR STIRRLRDL KE

UniProtKB: Large ribosomal subunit protein eL43

Macromolecule #57: Large ribosomal subunit protein eL14

• Macromolecule: Name: Large ribosomal subunit protein eL14 / type: protein_or_peptide / ID: 57 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 15.384291 KDa

Sequence

String:

MVFNRVVQIG RVVFIASGKD QGKLAAIVNV IDGNRVQIDG PSSDVTRTVR NLKDLQLTKF VLKLRVGQRT KGVKAAFDAA KVTENFQKT QWAKKIAQRA IRAKLTDFER YKLMKAKQMR NRIVRVELAK LKKAQK

UniProtKB: Large ribosomal subunit protein eL14

Macromolecule #58: Large ribosomal subunit protein eL30

• Macromolecule: Name: Large ribosomal subunit protein eL30 / type: protein_or_peptide / ID: 58 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 12.453453 KDa

Sequence

String:

MAPAAKPQVK KNAENINSRL SMVMKTGQYV LGYKQTLKSL LNGKAKLVII ANNTPPLRKS EIEYYAMLAK TGVHHYNGNN IELGTACGR LFRVCTLAVT DAGDSDIILS VPSESA

UniProtKB: Large ribosomal subunit protein eL30

Macromolecule #59: Large ribosomal subunit protein uL6

• Macromolecule: Name: Large ribosomal subunit protein uL6 / type: protein_or_peptide / ID: 59 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 21.545129 KDa

Sequence

String:

MKLIESNDTV VFPEGVTFTV KNRIVHVTGP RGTIRKDFRH LHMEMERIGK STLRVRKWFG VRKELAAIRT VCSHIKNMIK GVTVGFRYK MRSVYAHFPI NVTLQDGNRT VEIRNFLGEK IVRRVPLPEG VIATISTAQK DEIVVEGNDV QFVSQAAARI Q QSTAVKEK DIRKFLDGIY VSEKTTIVPT D

UniProtKB: Large ribosomal subunit protein uL6

Macromolecule #60: Large ribosomal subunit protein uL24

• Macromolecule: Name: Large ribosomal subunit protein uL24 / type: protein_or_peptide / ID: 60 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 16.117917 KDa

Sequence

String:

MKVNPFVSSD SGKSRKAHFN APSHERRRIM SAPLTKELRT KHGIRAIPIR TDDEVVVMRG RHKGNTGRVL RCYRKKFVIH IDKITREKA NGSTVHIGIH PSKVAITKLK LDKDRRALVE RKAAGRSRVT GILKGKHTDE TVN

UniProtKB: Large ribosomal subunit protein uL24

Macromolecule #61: Large ribosomal subunit protein eL19

• Macromolecule: Name: Large ribosomal subunit protein eL19 / type: protein_or_peptide / ID: 61 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 23.715811 KDa

Sequence

String:

MSNLRLQKRL ASAVLKCGKH RVWLDPNEVS EISGANSRQS IRRLVNDGLI IRKPVTVHSR FRAREYEEAR RKGRHTGYGK RRGTANARM PEKTLWIRRM RVLRNLLRRY RDAKKLDKHL YHELYLRAKG NNFKNKKNLI EYIFKKKTEN KRAKQLADQA Q ARRDKNKE SRKRREERQV VKRAELLRKI SQSEKVIAGK

UniProtKB: Large ribosomal subunit protein eL19

Macromolecule #62: 60S ribosomal protein L29

• Macromolecule: Name: 60S ribosomal protein L29 / type: protein_or_peptide / ID: 62 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 7.249525 KDa

Sequence

String:

MAKSKNHTNH NQNKKAHRNG ITKPKKHIFL SMKGVDAKFI KNLRFSRKNN KRQINKSVES KA

UniProtKB: 60S ribosomal protein L29

Macromolecule #63: Large ribosomal subunit protein eL18

• Macromolecule: Name: Large ribosomal subunit protein eL18 / type: protein_or_peptide / ID: 63 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 21.042441 KDa

Sequence

String:

MGIDINHKHD RVARRTAPKS ENPYLRLLSK LYAFLARRTG EKFNAIVLKR LRMSRRNRQP LSLAKLARAV QKAGNENKTV VTLSTVTDD ARLYTVPKIS VAALHVTEGA RARILAAGGE IITLDQLALK SPKGENTVFL QGPRSAREAE KHFGPAPGVP H SHTKPYVR SKGRKFERAR GRRASRAYKN

UniProtKB: Large ribosomal subunit protein eL18

Macromolecule #64: Large ribosomal subunit protein eL21

• Macromolecule: Name: Large ribosomal subunit protein eL21 / type: protein_or_peptide / ID: 64 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 18.349395 KDa

Sequence

String:

MTNSKGLRRG TRYMFARDFR KHGVEHLSTY YTQYKRGDLV DIKTNGAFQK GMPFKAYHGR TGRIFNVTRG AVGIIVNKRV RGNILPKRI NIRIEHIKPS KCRTDFLNRV KSNDEKRKAA KSAGQPVPAL KRLPVAPRGA HTVTTQNNEP ELLAPLRFEI V A

UniProtKB: Large ribosomal subunit protein eL21

Macromolecule #65: Large ribosomal subunit protein uL18

• Macromolecule: Name: Large ribosomal subunit protein uL18 / type: protein_or_peptide / ID: 65 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 33.451234 KDa

Sequence

String:

MGLVKVIKNK AYFKRYQVKL RRRREGKTDY YARKRLTVQD KNKYNTPKYR LIVRITNKDV VAQLAYSKIE GDVVVASAYS HELPRYGLK VGLTNYAAAY ATGLLLARRH LKTIGLDSTY KGHEELTGED YNVEEEGDRA PFKAVLDIGL ARTTTGSKIF A VMKGVADG GINVPHSESR FFGFDQESKE YNAEAHRDRI LGKHVADYMT YLKEEDEDRY KRQFSKFLAA GLNADNLVAT YQ KVHSAIR ADASPAAKKA AKPSKRHTAK RLTYDERKQR VADKKALLLQ LKEQQE

UniProtKB: Large ribosomal subunit protein uL18

Macromolecule #66: Large ribosomal subunit protein eL27

• Macromolecule: Name: Large ribosomal subunit protein eL27 / type: protein_or_peptide / ID: 66 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 15.76587 KDa

Sequence

String:

MGKIMKPGKV VLVLRGKYAG RKAVVVKQQD EGVSDRTYPH AIIAGIDRYP LKVTKDMGKK KIEKRNKLKP FLKVVSYTHL LPTRYSVDV AFDKTNINKE ALKAPSKKRK ALVEVKSKFE ERYKTGKNKW FFTKLRF

UniProtKB: Large ribosomal subunit protein eL27

Macromolecule #67: Large ribosomal subunit protein uL22

• Macromolecule: Name: Large ribosomal subunit protein uL22 / type: protein_or_peptide / ID: 67 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 21.560832 KDa

Sequence

String:

MTKVHYSRAP ENSTKSCKAR GSDLRVHFKN THEAAMALRG MPLRRAQAFL NHVKEHKEIV PFRRFHGGIG RAAQTKQWNT TQGRWPVKS ADFLLDLLKN AESNAEYKGL DVDHLVIEHI NVQRAAKLRR RTYRAHGRIN PYMSSPCHIE VILAEKEDVV S KPTDDAAP KVKKESKRKQ RRQLARGEF

UniProtKB: Large ribosomal subunit protein uL22

Macromolecule #68: eL41

• Macromolecule: Name: eL41 / type: protein_or_peptide / ID: 68 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 3.012853 KDa

Sequence

String:

MREKWRKKRM RRLKRKRRAA KK

Macromolecule #69: Large ribosomal subunit protein eL34

• Macromolecule: Name: Large ribosomal subunit protein eL34 / type: protein_or_peptide / ID: 69 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 12.712126 KDa

Sequence

String:

MSLRVTYRRR LSYNTTSNKK RLVKTPGGRL VVQYIKKRGQ IPKCRDTGVK LHGITPARPI ALRLLKRNER TVTRAYGGCL SPNAVKERI TRAFLVEEQK IVNKVIKHQK D

UniProtKB: Large ribosomal subunit protein eL34

Macromolecule #70: Large ribosomal subunit protein eL38

• Macromolecule: Name: Large ribosomal subunit protein eL38 / type: protein_or_peptide / ID: 70 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 8.096725 KDa

Sequence

String:

MPKEIKEIKD FLVKARRKDA KSVKIKKNSN NTKFKVRCAS YLYTLVVADK DKAEKLKQSL PPGIQVKELK

UniProtKB: Large ribosomal subunit protein eL38

Macromolecule #71: Ubiquitin-ribosomal protein eL40 fusion protein

• Macromolecule: Name: Ubiquitin-ribosomal protein eL40 fusion protein / type: protein_or_peptide / ID: 71 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 14.680231 KDa

Sequence

String:

MQIFVKTLTG KTITLEVEAS DTIENVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLSDYN IQKESTLHLV LRLRGGIIEP SLRQLAQKY NCDKQICRKC YARLPPRASN CRKKKCGHSS ELRIKKKLK

UniProtKB: Ubiquitin-ribosomal protein eL40 fusion protein

Macromolecule #72: Large ribosomal subunit protein eL31

• Macromolecule: Name: Large ribosomal subunit protein eL31 / type: protein_or_peptide / ID: 72 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 14.291505 KDa

Sequence

String:

MAPKNEKKSR STINEVVTRE YTIHIHARIR GIGSKKRAPR AIDEIKKFAK IQMKTNDVRV DTKLNKFIWS KGIKNVPYRV RVRLSRRRN EDEDSAQKLY TLCTYVPCTN FHGLTNVNVD SEE

UniProtKB: Large ribosomal subunit protein eL31

Macromolecule #73: Large ribosomal subunit protein eL32

• Macromolecule: Name: Large ribosomal subunit protein eL32 / type: protein_or_peptide / ID: 73 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 15.554309 KDa

Sequence

String:

MVHVSGTKVK VVKKKLTKFK RHESDRYRRV APSWRKPKGI DNRVRRRFRG MRAMPTIGHG SDRRTRFVLP NGYKKVLVQN VKDLDMLLM QSYKYIGEIG HGVSAKSRKG IVERAAQLNI KLTNGNARLR TEESE

UniProtKB: 60S ribosomal protein L32

Macromolecule #74: Large ribosomal subunit protein eL24

• Macromolecule: Name: Large ribosomal subunit protein eL24 / type: protein_or_peptide / ID: 74 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 17.825902 KDa

Sequence

String:

MKVETCVYSG YKIHPGHGKR LVRTDGKVQI FLSGKALKGA KLRRNPRDIR WTVLYRIKNK KGTHGQEQVT RKKTKKSVQV VNRAVAGLS LDAILAKRNQ TEDFRRQQRE QAAKIAKDAN KAVRAAKAAA NKEKKASQPK TQQKTAKNVK TAAPRVGGKR

UniProtKB: Large ribosomal subunit protein eL24

Macromolecule #75: Ribosomal protein L37

• Macromolecule: Name: Ribosomal protein L37 / type: protein_or_peptide / ID: 75 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 10.536203 KDa

Sequence

String:

MTKGTQAFGK KHVKSHTLCK RCGKSSFHIQ KKRCASCGYP DAKKRTYNWG AKSIRRRTTG TGRTRHLRDV NARFRNGFRE GTTPKPRAQ PTN

UniProtKB: Ribosomal protein L37

Macromolecule #76: Large ribosomal subunit protein uL5B

• Macromolecule: Name: Large ribosomal subunit protein uL5B / type: protein_or_peptide / ID: 76 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 22.823561 KDa

Sequence

String:

MGDIEKQTEI REKKARNVMR ELKIQKLCLN ICVGESGDRL TRAAKVLEQL TGQTPVFSKA RYTVRTFGIR RNEKIAVHCT VRGPKAEEI LEKGLKVKEY ELYKENFSDT GNFGFGVQEH IDLGIKYDPS IGIYGMDFYV VLDRAGRRIA KRRRAPGRVG P SHRVEREE SIKWFQQKYD GIILPPKPKV KRTFHRRR

UniProtKB: Large ribosomal subunit protein uL5B

Macromolecule #77: Large ribosomal subunit protein uL23B

• Macromolecule: Name: Large ribosomal subunit protein uL23B / type: protein_or_peptide / ID: 77 / Number of copies: 1 / Enantiomer: LEVO
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 16.32014 KDa

Sequence

String:

MAPSSNKVGK AIQAKKAVVK GSKTNVRKNV RTSVHFRRPK TLVTARAPRY ARKSAPARDK LDSFAVIKAP HTTESSMKKI EDHNTLVFI VDEKANKHHI KRAVHALYNV KAVKVNTLIT PLQQKKAYVR LASDYDALDV ANKIGFI

UniProtKB: Large ribosomal subunit protein uL23B

Macromolecule #5: 5S rRNA

• Macromolecule: Name: 5S rRNA / type: rna / ID: 5 / Number of copies: 1
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 38.254645 KDa

Sequence

String:

GCUUACGACC AUAUCACGUU GAAUGCACGC CAUCCCGUCC GAUCUGGCAA GUUAAGCAAC GUUGAGUCCA GUUAGUACUU GGAUCGGAG ACGGCCUGGG AAUCCUGGAU GUUGUAAGCU

GENBANK: GENBANK: X16224.1

Macromolecule #6: 5.8S rRNA

• Macromolecule: Name: 5.8S rRNA / type: rna / ID: 6 / Number of copies: 1
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 49.250074 KDa

Sequence

String:

CUAGCUUCAG CGAUGGAUCG GUUGCAUCGA GUAUCGAUGA AGAACGCAGC UUGCUGCGUU ACUUACCACG AAUUGCAGAC GCUUAGAGU GGUGAAAUUU CGAACGCAUA GCACCAACUG GGCCUCCAGU UGGUACGUCU GGUUCAGGGU UGUU

GENBANK: GENBANK: X03680.1

Macromolecule #7: 18S rRNA

• Macromolecule: Name: 18S rRNA / type: rna / ID: 7 / Number of copies: 1
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 565.164562 KDa

Sequence

String:

AUACCUGAUU GAUUCUGUCA GCGCGAUAUG CUCAAGUAAA AGAUUAAGCC AUGCAUGCUU UGAUUCAUCA AUGAAAUUGC GUACGGCUC AUUAGAGCAG AUAUCACCUU AUCCGGGAUC CUCAUAUGGA UAACUGCGGA AAUACUGGAG CUAAUACAUG C AACUAUAC CCCAACGCAA GGCGGGGUGC AAUUAUUAGA ACAGACCAAA CGUUUUCGGA CGUUGUUUGU UGACUCUGAA UA AAGCAGU UUACUGUCAG UUUCGACUGA CUCUAUCCGG AAAGGGUGUC UGCCCUUUCA ACUAGAUGGU AGUUUAUUGG ACU ACCAUG GUUGUUACGG GUAACGGAGA AUAAGGGUUC GACUCCGGAG AGGGAGCCUU AGAAACGGCU ACCACGUCCA AGGA AGGCA GCAGGCGCGA AACUUAUCCA CUGUUGAGUA UGAGAUAGUG ACUAAAAAUA UAAAGACUCA UCCUUUUGGA UGAGU UAUU UCAAUGAGUU GAAUACAAAU GAUUCUUCGA GUAGCAAGGA GAGGGCAAGU CUGGUGCCAG CAGCCGCGGU AAUUCC AGC UCUCCUAGUG UAUCUCGUUA UUGCUGCGGU UAAAAAGCUC GUAGUUGGAU CUAGGUUACG UGCCGCAGUU CGCAAUU UG CGUCAACUGU GGUCGUGACU UCUAAUUUGC UGGUUUGAGG UUGGGUUCGC CCUUCAACUG CCAGCAGGUU UACCUUGA A UAAAUCAGAG UGCUCAAUAC AAGCGCUUGC UUGAAUAGCU CAUCAUGGAA UAAUGAAACA GGACUUCGGU UCUUUUUGU UGGUUCUAGA ACUGAUUUAA UGGUUAAGAG GGACAAACCG GGGGCAUUCG UAUCAUUACG CGAGAGGUGA AAUUCGUGGA CCGUAGUGA GACGCCCAAC AGCGAAAGCA UUUGCCAAGA AUGUCUUCAU UAAUCAAGAA CGAAAGUCAG AGGUUCGAAG G CGAUUAGA UACCGCCCUA GUUCUGACCG UAAACGAUGC CAUCUCGCGA UUCGGAGGGU UUUUGCCCUG CCGAGGAGCU AU CCGGAAA CGAAAGUCUU UCGGUUCCGG GGGUAGUAUG GUUGCAAAGC UGAAACUUAA AGAAAUUGAC GGAAGGGCAC CAC AAGGCG UGGAGCUUGC GGCUUAAUUU GACUCAACAC GGGAAAACUC ACCCGGUCCG GACACCAUUA GGACUGACAG AUUG AAAGC UCUUUCUCGA UUUGGUGGUU GGUGGUGCAU GGCCGUUCUU AGUUGGUGGA GUGAUUUGUC UGGUUUAUUC CGAUA ACGA GCGAGACUCU AGCCUGCUAA AUAGUUGGCG AAUCUUCGGG UUCGUAUAAC UUCUUAGAGG GAUAAGCGGU GUUUAG CCG CACGAGAUUG AGCGAUAACA GGUCUGUGAU GCCCUUAGAU GUCCGGGGCU GCACGCGUGC UACACUGGUG GAGUCAG CG GGUUUUUCCU AUGCCGAAAG GUAUCGGUAA ACCGUUGAAA UUCUUCCAUG UCCGGGAUAG GGUAUUGUAA UUAUUGCC C UUAAACGAGG AAUGCCUAGU AAGUGUGAGU CAUCAGCUCA CGUUGAUUAC GUCCCUGCCC UUUGUACACA CCGCCCGUC GCUAUCCGGG ACUGAACUGA UUCGAGAAGA GUGGGGACUG UCGCUUCGAG GUUUAACGAC UUCGUUGUUG CGGAAACCAU UUUUAUCGC AUUGGUUUGA ACCGGGUAAA AGUCGUAACA AGGUAGCUGU AGGUGAACCU GCAGCUGGAU CAUCG

GENBANK: GENBANK: NR_000053.1

Macromolecule #8: 28S rRNA

• Macromolecule: Name: 28S rRNA / type: rna / ID: 8 / Number of copies: 1
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 1.132082375 MDa

Sequence

String:

CUCAACCUGA ACUCAGUCGU GAUUACCCGC UGAACUUAAG CAUAUCAUUU AGCGGAGGAA AAGAAACUAA AAAGGAUUCC CUUAGUAAC GGCGAGUGAA ACGGGAAGAG CCCAGCGCCG AAUCGAUCAG UCUUUGGCUG CUUCGAAAUG UGGCGUAUAG G UGUAAGUU UCCAGCAGUG UCGUAUGUCC GAAGUCCUUA CGAUUGAGGC CAUAAACCAG AGAGGGUGCG AGCCCCGUUC UG GAUAGCG GCACUGUUGG UUCGCUUGCU CCUUGGAGUC GGGUUGCUUG AAAGUGCAGC CUAAAGUGGG UGAUAAACUU CAU CUAAGG CUAAAUAUCG ACUCGAUUGC GAUAGCGAAC AAGUACCGUG AGGGAAAGUU GCAAAGGACU UUGAAGAGAG AGUU CAAGA GAACGUGAAA UCGCUGGAGU GGAACCGGAG ACAGUUGAUG UUGCUUGGAG ACAAGCUUGG UGACUGGUCG CUUAG UUGU GAUCGUUGCC GGGUGUCGUU UCCUAUGCUA CGCCGACGGC GUUGGCUGCU CGUUCUAGCC CGACAGUGUU GCCCAU CUC GCAAGAGAAG GUGUCUUGCU GGCGGUAGUG GGUUCGUGGC GGCUAGCGUU UAGUUACGCU AGUGUGUGUG ACGUCGG UG UGAAAGUCGA CGACGUUUCC GACCCGUCUU GAAACACGGA UUGCGGAGUG CUUGUCUACU GCGAGUCAAA GGGUGUUA A AACCUUGCGG CGAAAUGAAA GUAAAGGUCA GUCUCGAAUU GGCCGACGUG GGAUCUGUGU UCUUCGGAGU GCAGCGCAC CACGGCCCUG UGCGUGUCAC UUGUGACUGU GCAGAGGUUG AGCAGUUGGC AAACGACCCG AAAGAUGGUG AACUAUGCCU GAGCAGGAU GAAGCCAGAG GAAACUCUGG UGGAAGUCCG UAUCGGUUCU GACGUGCAAA UCGAUCGAUA GACUUGGGUA U AGGGGCGA AAGACUAAUC GAACCAUCUA GUAGCUGGUU CCUUCCGAAG UUUCCCUCAG GAUAGCUGGA UCUCAGGCAG UU AUAUUCG GUAAAGCUAA UGAUUAGAGG CCUUGGGGAC GUAAUGUCCU CAACCUAUUC UCAAACUUUC AAUGGAUAUG AAG UUGCAG UUUCUUUAGU GAACUGUCAA CGUGAAUGCG AGGUCCAAGU GGGCCAUUUU UGGUAAGCAG AACUGGCGCU GUGG GAUGA ACCAAACGUG GAGUUAAGGU GCCUAACUUC UCGCUCAUGA GACCCCAUAA AAGGUGUUGG UUGAUAUUGA CAGCA GGAC GGUGGCCAUG GAAGUCGGUA UCCGCUAAGG AGUGUGUAAC AACUCACCUG CCGAAUCAAC UAGCCCUGAA AAUGGA UGG CGCUUAAGCG AGAGACCUAU ACUCCGCCGU UGCGACAUGU GCGUUGUCUA GCGCCAGGUC GUAACGAGUA GGAAGGU CG UGGCGGUUGC GUUGAAGGCU AUGAGCGUAG GCUCGGCUGG AGCUUCCGUC AGUGCAGAUC GUAAUGGUAG UAGCAAAU A UUCAAGUUCG AUCCUUGAAG ACUGAAGUGG AGAAGGGUUC CACGUGAACA GUAGUUGGAU GUGGGUCAGU CGAUCCUAA GGUACUGGCG AACGCCUUGU AUCAUCGGUG GCGAAAAGCU UGCUUUUAGU CCCCGCUUGU CGAAAGGGAA UAGGGUUAAU AUUCCCUAA CUGAGAUGCA AAGAUUGUGU UCUUCGGAGC ACAAGCGCGG UAACGCAUUC GAACUUGGUU AGUCGCUCAA A GACCGAGC UAGAGUUUUC UUCUCUAGUU AAGGAACGGA CUCCCUGGAA UUGGUUCAGC CAGAGAUGGG GACGUUGUUU CC GAAAAGC ACCGCGGUUU CUGUGGUGUC UCGUGCUCUU UGAACGGCCC UUAAAACACC AAGGGAGGCU AUUAAUUUGC ACU CAAUCG UACCGAUAUC CGCAUUAGGU CUCCAAGGUG AACAGCCUCU AGUCGAUAGA AUAAUGUAGG UAAGGGAAGU CGGC AAACU AGAUCCGUAA CUUCGGGAAA AGGAUUGGCU CCAGUGGUUG GAACGGUUGG CCAGUUGGUU GAUGCUUGUC CGGCG CAGU UCUGUCUGCU UGAUACUUUC GGGUUGAUGG CGGACUAGUG AUUGUGCUUG CUUGCGGACG CUUUCUGGUG UGUGCU UGG ACCUCGGUUC UAGUAUCCUG AUCGCUCAUC UAAACAACCG UACUGGAACC GGUACGGACU CAGGGAAUCC GACUGUC UA AUUAAAACAG AGGUGACAGA UGGUCCUUGC GGACGUUGAC UGUCACUGAU UUCUGCCCAG UGCUCUGAAU GUUAAAUC G UAGUAAUUCG AGUAAGCGCG GGUAAACGGC GGGAGUAACU AUGACUCUCU UAAGGUAGCC AAAUGCCUCG UCAUUUAAU UGUUGACGCG CAUGAAUGGA UUAACGAGAU UCCUACUGUC CCUAACUACU UUCUAGCGAA ACCACAGCCA AGGGAACGGG CUUGGCAAA AAUAGCGGGG AAAGAAGACC CUGUUGAGCU UGACUCUAGU UUGACAUUGU GAAGAGUCAU GAGAGGUGUA G CAUAGGUG GGAGUCUUCG GACGACAGUG AAAUACCACC ACUUUCAUCG ACUCUUUACU UAUUCGGUUA AAAGAGAAUU GG CUUCACG GCCUUUUUUC GAAGCAUUAA GCGGAGCCAU UUUAUGGCAC CGUGACUCUC CUCGAAGACA GUGUCAAGCG GGG AGUUUG ACUGGGGCGG UACAUCUAUC AAAUCGUAAC GUAGGUGUCC UAAGGCGAGC UCAGAGAGGA CGGAAACCUC UCGU AGAGC AAAAGGGCAA AAGCUUGCUU GAUCUUGACU UUCAGUACGA GUACAGACCG CGAAAGCGUG GCCUAUCGAU CCUUU UAAU CCUGAUUGUU UCAGGUAAGA GGUGUCAGAA AAGUUACCAC AGGGAUAACU GGCUUGUGGC AGCCAAGCGU CCAUAG CGA CGUUGCUUUU UGAUCCUUCG AUGUCGGCUC UUCCUAUCAU UGCGAAGCAG AAUUCGCCAA GCGUUGGAUU GUUCACC CA CUAAUAGGGA ACGUGAGCUG GGUUUAGACC GUCGUGAGAC AGGUUAGUUU UACCCUACUG UUGACUUGUU AUUGCGAA A GUAAUCCUGC UUAGUACGAG AGGAACAGCG GGUUCAAACA UUUGGUUCAU AGACUUGAUC GACAGAUCAA UGGUCUGAA GCUACCAUUU GAGAGAUUAU AACUGAACGC CUCUAAGUUA GAAUCUCGCC UUGUCAAGGC GAAAAUUUCU UGCUUCCCGG UGUCGGGAG GCAUCUCUAU CUCGUGGCAA CACGAGAGCU UAUGCCCUAU GUAUGGCCUU GGCGUCGUAG UGAAUUCUGC G ACGCUUGC CAACGCCAGA UCACUCUGGU UCAAUGUCGG GGCGCUAAAU CACUUGCAUA CGACUUGGUC UCUUGGUCAA GG UGUUGUA UUCAGUAGAG CAGUCCUUUU AUACUGCGAU CUGUUGAGAC UAUCCUUUGA UUGAGUUUUU UGU

Macromolecule #78: tRNA

• Macromolecule: Name: tRNA / type: rna / ID: 78 / Number of copies: 2
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 24.533586 KDa

Sequence

String:

GCCUCGAUAG CUCAGUUGGG AGAGCGUACG ACUGAAGAUC GUAAGGUCAC CAGUUCGAUC CUGGUUCGGG GCACCA

Macromolecule #79: mRNA

• Macromolecule: Name: mRNA / type: rna / ID: 79 / Number of copies: 1
• Source (natural): Organism: Caenorhabditis elegans (invertebrata)
• Molecular weight: Theoretical: 3.0167 KDa

Sequence

String:

UUUUUUUUUU

Macromolecule #80: SPERMIDINE

• Macromolecule: Name: SPERMIDINE / type: ligand / ID: 80 / Number of copies: 1 / Formula: SPD
• Molecular weight: Theoretical: 145.246 Da

Chemical component information

ChemComp-SPD:
SPERMIDINE

Macromolecule #81: 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethy...

• Macromolecule: Name: 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione; type: ligand / ID: 81 / Number of copies: 1 / Formula: 3HE
• Molecular weight: Theoretical: 281.347 Da

Chemical component information

ChemComp-3HE:
4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione

Experimental details

Structure determination

• Method: cryo EM
• Processing: single particle reconstruction
• Aggregation state: particle

Sample preparation

• Concentration: 0.5 mg/mL
• Buffer: pH: 7.4
• Grid: Model: Quantifoil R2/1 / Material: COPPER / Mesh: 200 / Support film - Material: CARBON / Support film - topology: CONTINUOUS / Support film - Film thickness: 2 / Pretreatment - Type: GLOW DISCHARGE / Pretreatment - Time: 20 sec.
• Vitrification: Cryogen name: ETHANE / Chamber humidity: 100 % / Chamber temperature: 298 K / Instrument: FEI VITROBOT MARK IV

Electron microscopy

• Microscope: TFS KRIOS
• Software: Name: SerialEM (ver. v4.93)
• Image recording: Film or detector model: GATAN K3 BIOCONTINUUM (6k x 4k) / Number grids imaged: 1 / Number real images: 8337 / Average electron dose: 40.94 e/Ų
• Electron beam: Acceleration voltage: 300 kV / Electron source: FIELD EMISSION GUN
• Electron optics: Illumination mode: FLOOD BEAM / Imaging mode: BRIGHT FIELD / Nominal defocus max: 2.0 µm / Nominal defocus min: 0.5 µm
• Sample stage: Specimen holder model: FEI TITAN KRIOS AUTOGRID HOLDER / Cooling holder cryogen: NITROGEN
• Experimental equipment: Model: Titan Krios / Image courtesy: FEI Company

Image processing

• Particle selection: Number selected: 695837
• Startup model: Type of model: NONE
• Final reconstruction: Number classes used: 1 / Applied symmetry - Point group: C₁ (asymmetric) / Resolution.type: BY AUTHOR / Resolution: 2.63 Å / Resolution method: FSC 0.143 CUT-OFF / Software - Name: cryoSPARC (ver. 4.4.1) / Number images used: 98135
• Initial angle assignment: Type: ANGULAR RECONSTITUTION / Software - Name: cryoSPARC (ver. 4.4.1)
• Final angle assignment: Type: ANGULAR RECONSTITUTION / Software - Name: cryoSPARC (ver. 4.4.1)
• Final 3D classification: Number classes: 2 / Avg.num./class: 98135 / Software - Name: cryoSPARC (ver. 4.4.1)

Atomic model buiding 1

• Initial model: Chain - Source name: AlphaFold / Chain - Initial model type: in silico model
• Software: Name: Coot
• Refinement: Space: REAL / Protocol: RIGID BODY FIT / Overall B value: 59.4

Output model

PDB-9bh5:
High-resolution C. elegans 80S ribosome structure - class 1