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- EMDB-4324: 26S proteasome, s6 state -

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基本情報

登録情報
データベース: EMDB / ID: EMD-4324
タイトル26S proteasome, s6 state
マップデータ26S proteasome in state S6
試料
  • 複合体: 26S proteasome
    • タンパク質・ペプチド: x 33種
  • リガンド: x 3種
キーワード26S proteasome / AAA+ ATPase / HYDROLASE
機能・相同性
機能・相同性情報


SAGA complex localization to transcription regulatory region / Metalloprotease DUBs / proteasome regulatory particle assembly / proteasome storage granule assembly / transcription export complex 2 / protein deneddylation / peroxisome fission / maintenance of DNA trinucleotide repeats / filamentous growth / COP9 signalosome ...SAGA complex localization to transcription regulatory region / Metalloprotease DUBs / proteasome regulatory particle assembly / proteasome storage granule assembly / transcription export complex 2 / protein deneddylation / peroxisome fission / maintenance of DNA trinucleotide repeats / filamentous growth / COP9 signalosome / proteasome regulatory particle / protein-containing complex localization / proteasome-activating activity / mitochondrial fission / proteasome regulatory particle, lid subcomplex / proteasome regulatory particle, base subcomplex / metal-dependent deubiquitinase activity / K48-linked polyubiquitin modification-dependent protein binding / proteasome core complex assembly / nuclear outer membrane-endoplasmic reticulum membrane network / Proteasome assembly / Cross-presentation of soluble exogenous antigens (endosomes) / TNFR2 non-canonical NF-kB pathway / proteasomal ubiquitin-independent protein catabolic process / Ubiquitin-Mediated Degradation of Phosphorylated Cdc25A / nonfunctional rRNA decay / Regulation of PTEN stability and activity / CDK-mediated phosphorylation and removal of Cdc6 / 3-deoxy-7-phosphoheptulonate synthase / 3-deoxy-7-phosphoheptulonate synthase activity / FBXL7 down-regulates AURKA during mitotic entry and in early mitosis / peptide catabolic process / KEAP1-NFE2L2 pathway / Neddylation / proteasome binding / Orc1 removal from chromatin / MAPK6/MAPK4 signaling / regulation of protein catabolic process / proteasome storage granule / Antigen processing: Ubiquitination & Proteasome degradation / polyubiquitin modification-dependent protein binding / protein deubiquitination / positive regulation of RNA polymerase II transcription preinitiation complex assembly / chorismate biosynthetic process / Ub-specific processing proteases / proteasome endopeptidase complex / endopeptidase activator activity / proteasome core complex, beta-subunit complex / proteasome assembly / aromatic amino acid family biosynthetic process / threonine-type endopeptidase activity / proteasome core complex, alpha-subunit complex / mRNA export from nucleus / enzyme regulator activity / amino acid biosynthetic process / ERAD pathway / Neutrophil degranulation / protein folding chaperone / proteasome complex / ubiquitin binding / double-strand break repair via homologous recombination / nucleotide-excision repair / positive regulation of transcription elongation by RNA polymerase II / metallopeptidase activity / positive regulation of protein catabolic process / peroxisome / ubiquitin-dependent protein catabolic process / protein-macromolecule adaptor activity / endopeptidase activity / molecular adaptor activity / proteasome-mediated ubiquitin-dependent protein catabolic process / ubiquitinyl hydrolase 1 / cysteine-type deubiquitinase activity / regulation of cell cycle / chromatin remodeling / protein domain specific binding / ubiquitin protein ligase binding / endoplasmic reticulum membrane / structural molecule activity / endoplasmic reticulum / positive regulation of transcription by RNA polymerase II / ATP hydrolysis activity / mitochondrion / ATP binding / metal ion binding / identical protein binding / nucleus / cytosol / cytoplasm
類似検索 - 分子機能
Rpn9, C-terminal helix / Rpn9 C-terminal helix / Proteasomal ubiquitin receptor Rpn13/ADRM1 / Proteasomal ubiquitin receptor Rpn13/ADRM1, Pru domain superfamily / Rpn13/ADRM1, Pru domain / Proteasome complex subunit Rpn13, Pru domain / Pru (pleckstrin-like receptor for ubiquitin) domain profile. / : / 26S proteasome regulatory subunit RPN7/PSMD6 C-terminal helix / 26S proteasome non-ATPase regulatory subunit Rpn12 ...Rpn9, C-terminal helix / Rpn9 C-terminal helix / Proteasomal ubiquitin receptor Rpn13/ADRM1 / Proteasomal ubiquitin receptor Rpn13/ADRM1, Pru domain superfamily / Rpn13/ADRM1, Pru domain / Proteasome complex subunit Rpn13, Pru domain / Pru (pleckstrin-like receptor for ubiquitin) domain profile. / : / 26S proteasome regulatory subunit RPN7/PSMD6 C-terminal helix / 26S proteasome non-ATPase regulatory subunit Rpn12 / 26S proteasome regulatory subunit, C-terminal / Proteasome regulatory subunit C-terminal / 26S proteasome regulatory subunit RPN5, C-terminal domain / : / 26S proteasome regulatory subunit RPN5 C-terminal domain / PSD13 N-terminal repeats / 26S proteasome regulatory subunit Rpn6, N-terminal / 6S proteasome subunit Rpn6, C-terminal helix domain / 26S proteasome regulatory subunit RPN6 N-terminal domain / 26S proteasome subunit RPN6 C-terminal helix domain / 26S Proteasome non-ATPase regulatory subunit 13 / : / 26S proteasome subunit RPN2, N-terminal domain / 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit / 26S proteasome regulatory subunit RPN2, C-terminal / 26S proteasome regulatory subunit RPN2 C-terminal domain / : / 26S proteasome regulatory subunit RPN11 C-terminal domain / Proteasome subunit Rpn10 / 26S Proteasome non-ATPase regulatory subunit 7/8 / DSS1/SEM1 / DSS1/SEM1 family / DSS1_SEM1 / 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn1 subunit / RPN1, N-terminal / 26S proteasome non-ATPase regulatory subunit RPN1, C-terminal / RPN1 N-terminal domain / 26S proteasome non-ATPase regulatory subunit RPN1 C-terminal / : / 26S proteasome regulatory subunit 7, OB domain / : / : / : / PSMD12/CSN4, N-terminal / 26S proteasome regulatory subunit Rpn7/COP9 signalosome complex subunit 1 / 26S proteasome regulatory subunit Rpn7, N-terminal / 26S proteasome subunit RPN7 / 26S Proteasome non-ATPase regulatory subunit 12/COP9 signalosome complex subunit 4 / Proteasome/cyclosome repeat / Proteasome/cyclosome repeat / PCI/PINT associated module / : / von Willebrand factor type A domain / Proteasomal ATPase OB C-terminal domain / Proteasomal ATPase OB C-terminal domain / CSN8/PSMD8/EIF3K / CSN8/PSMD8/EIF3K family / Rpn11/EIF3F, C-terminal / Maintenance of mitochondrial structure and function / HEAT repeats / : / motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 / PCI domain / Proteasome component (PCI) domain / PCI domain profile. / DAHP synthetase, class II / Class-II DAHP synthetase family / Ubiquitin interacting motif / Ubiquitin-interacting motif (UIM) domain profile. / JAB1/Mov34/MPN/PAD-1 ubiquitin protease / Proteasome beta subunit, C-terminal / Proteasome beta subunits C terminal / Proteasome subunit beta 4 / Proteasome subunit beta 2 / Proteasome beta 3 subunit / Proteasome subunit alpha5 / Proteasome subunit alpha6 / Proteasome beta-type subunits signature. / Peptidase T1A, proteasome beta-subunit / Proteasome beta-type subunit, conserved site / Proteasome subunit A N-terminal signature / Proteasome alpha-type subunits signature. / Proteasome alpha-subunit, N-terminal domain / Proteasome subunit A N-terminal signature Add an annotation / VWFA domain profile. / Proteasome B-type subunit / Proteasome beta-type subunit profile. / : / Proteasome alpha-type subunit / Proteasome alpha-type subunit profile. / Proteasome subunit / Proteasome, subunit alpha/beta / von Willebrand factor, type A / TPR repeat region circular profile. / AAA ATPase, AAA+ lid domain / AAA+ lid domain / JAB/MPN domain / JAB1/MPN/MOV34 metalloenzyme domain / TPR repeat profile. / MPN domain
類似検索 - ドメイン・相同性
26S proteasome regulatory subunit RPN13 / 26S proteasome complex subunit SEM1 / Phospho-2-dehydro-3-deoxyheptonate aldolase / Proteasome subunit alpha type-1 / Proteasome subunit beta type-4 / Proteasome subunit alpha type-3 / Proteasome subunit alpha type-2 / Proteasome subunit beta type-6 / Proteasome subunit beta type-2 / Proteasome subunit beta type-3 ...26S proteasome regulatory subunit RPN13 / 26S proteasome complex subunit SEM1 / Phospho-2-dehydro-3-deoxyheptonate aldolase / Proteasome subunit alpha type-1 / Proteasome subunit beta type-4 / Proteasome subunit alpha type-3 / Proteasome subunit alpha type-2 / Proteasome subunit beta type-6 / Proteasome subunit beta type-2 / Proteasome subunit beta type-3 / Proteasome subunit beta type-5 / Proteasome subunit beta type-7 / Proteasome subunit alpha type-5 / 26S proteasome regulatory subunit RPN12 / 26S proteasome regulatory subunit RPN2 / 26S proteasome regulatory subunit 6A / 26S proteasome regulatory subunit 6B homolog / 26S proteasome regulatory subunit 7 homolog / Proteasome subunit beta type-1 / 26S proteasome regulatory subunit RPN1 / 26S proteasome regulatory subunit RPN10 / 26S proteasome regulatory subunit RPN3 / Proteasome subunit alpha type-6 / Proteasome subunit alpha type-4 / 26S proteasome regulatory subunit 4 homolog / Ubiquitin carboxyl-terminal hydrolase RPN11 / 26S proteasome subunit RPT4 / 26S proteasome regulatory subunit 8 homolog / 26S proteasome regulatory subunit RPN9 / 26S proteasome regulatory subunit RPN7 / 26S proteasome regulatory subunit RPN8 / 26S proteasome regulatory subunit RPN5 / 26S proteasome regulatory subunit RPN6
類似検索 - 構成要素
生物種Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (パン酵母)
手法単粒子再構成法 / クライオ電子顕微鏡法 / 解像度: 6.1 Å
データ登録者Eisele MR / Reed RG
引用ジャーナル: Cell Rep / 年: 2018
タイトル: Expanded Coverage of the 26S Proteasome Conformational Landscape Reveals Mechanisms of Peptidase Gating.
著者: Markus R Eisele / Randi G Reed / Till Rudack / Andreas Schweitzer / Florian Beck / Istvan Nagy / Günter Pfeifer / Jürgen M Plitzko / Wolfgang Baumeister / Robert J Tomko / Eri Sakata /
要旨: The proteasome is the central protease for intracellular protein breakdown. Coordinated binding and hydrolysis of ATP by the six proteasomal ATPase subunits induces conformational changes that drive ...The proteasome is the central protease for intracellular protein breakdown. Coordinated binding and hydrolysis of ATP by the six proteasomal ATPase subunits induces conformational changes that drive the unfolding and translocation of substrates into the proteolytic 20S core particle for degradation. Here, we combine genetic and biochemical approaches with cryo-electron microscopy and integrative modeling to dissect the relationship between individual nucleotide binding events and proteasome conformational dynamics. We demonstrate unique impacts of ATP binding by individual ATPases on the proteasome conformational distribution and report two conformational states of the proteasome suggestive of a rotary ATP hydrolysis mechanism. These structures, coupled with functional analyses, reveal key roles for the ATPases Rpt1 and Rpt6 in gating substrate entry into the core particle. This deepened knowledge of proteasome conformational dynamics reveals key elements of intersubunit communication within the proteasome and clarifies the regulation of substrate entry into the proteolytic chamber.
履歴
登録2018年3月5日-
ヘッダ(付随情報) 公開2018年5月30日-
マップ公開2018年8月22日-
更新2024年5月15日-
現状2024年5月15日処理サイト: PDBe / 状態: 公開

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構造の表示

ムービー
  • 表面図（断面を密度値に従い着色）
  • 表面レベル: 0.012
  • UCSF Chimeraによる作画
  • ダウンロード
  • 表面図（半径に従い着色）
  • 表面レベル: 0.012
  • UCSF Chimeraによる作画
  • ダウンロード
  • あてはめたモデルとの重ね合わせ
  • 原子モデル: PDB-6fvy
  • 表面レベル: 0.012
  • UCSF Chimeraによる作画
  • ダウンロード
ムービービューア
構造ビューアEMマップ:
SurfViewMolmilJmol/JSmol

ダウンロードとリンク

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マップ

ファイルダウンロード / ファイル: emd_4324.map.gz / 形式: CCP4 / 大きさ: 216 MB / タイプ: IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)
注釈26S proteasome in state S6
ボクセルのサイズX=Y=Z: 1.38 Å
密度
表面レベル登録者による: 0.012 / ムービー #1: 0.012
最小 - 最大-0.078178994 - 0.12130537
平均 (標準偏差)0.000004878251 (±0.0037215422)
対称性空間群: 1
詳細

EMDB XML:

マップ形状
Axis orderXYZ
Origin000
サイズ384384384
Spacing384384384
セルA=B=C: 529.92 Å
α=β=γ: 90.0 °

CCP4マップ ヘッダ情報:

modeImage stored as Reals
Å/pix. X/Y/Z1.381.381.38
M x/y/z384384384
origin x/y/z0.0000.0000.000
length x/y/z529.920529.920529.920
α/β/γ90.00090.00090.000
MAP C/R/S123
start NC/NR/NS000
NC/NR/NS384384384
D min/max/mean-0.0780.1210.000

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添付データ

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試料の構成要素

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全体 : 26S proteasome

全体名称: 26S proteasome
要素
  • 複合体: 26S proteasome
    • タンパク質・ペプチド: Proteasome subunit alpha type-1
    • タンパク質・ペプチド: Proteasome subunit alpha type-2
    • タンパク質・ペプチド: Proteasome subunit alpha type-3
    • タンパク質・ペプチド: Proteasome subunit alpha type-4
    • タンパク質・ペプチド: Proteasome subunit alpha type-5
    • タンパク質・ペプチド: Proteasome subunit alpha type-6
    • タンパク質・ペプチド: Probable proteasome subunit alpha type-7
    • タンパク質・ペプチド: Proteasome subunit beta type-1
    • タンパク質・ペプチド: Proteasome subunit beta type-2
    • タンパク質・ペプチド: Proteasome subunit beta type-3
    • タンパク質・ペプチド: Proteasome subunit beta type-4
    • タンパク質・ペプチド: Proteasome subunit beta type-5
    • タンパク質・ペプチド: Proteasome subunit beta type-6
    • タンパク質・ペプチド: Proteasome subunit beta type-7
    • タンパク質・ペプチド: 26S proteasome regulatory subunit RPN10
    • タンパク質・ペプチド: Ubiquitin carboxyl-terminal hydrolase RPN11
    • タンパク質・ペプチド: 26S proteasome regulatory subunit RPN12
    • タンパク質・ペプチド: 26S proteasome regulatory subunit RPN13
    • タンパク質・ペプチド: 26S proteasome complex subunit SEM1
    • タンパク質・ペプチド: 26S proteasome regulatory subunit RPN1
    • タンパク質・ペプチド: 26S proteasome regulatory subunit RPN2
    • タンパク質・ペプチド: 26S proteasome regulatory subunit RPN3
    • タンパク質・ペプチド: 26S proteasome regulatory subunit RPN5
    • タンパク質・ペプチド: 26S proteasome regulatory subunit RPN6
    • タンパク質・ペプチド: 26S proteasome regulatory subunit RPN7
    • タンパク質・ペプチド: 26S proteasome regulatory subunit RPN8
    • タンパク質・ペプチド: 26S proteasome regulatory subunit RPN9
    • タンパク質・ペプチド: 26S proteasome regulatory subunit 7 homolog
    • タンパク質・ペプチド: 26S proteasome regulatory subunit 4 homolog
    • タンパク質・ペプチド: 26S proteasome regulatory subunit 6B homolog
    • タンパク質・ペプチド: 26S proteasome subunit RPT4
    • タンパク質・ペプチド: 26S proteasome regulatory subunit 6A
    • タンパク質・ペプチド: 26S proteasome regulatory subunit 8 homolog
  • リガンド: ADENOSINE-5'-TRIPHOSPHATE
  • リガンド: MAGNESIUM ION
  • リガンド: ADENOSINE-5'-DIPHOSPHATE

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超分子 #1: 26S proteasome

超分子名称: 26S proteasome / タイプ: complex / ID: 1 / 親要素: 0 / 含まれる分子: #1-#33
由来(天然)生物種: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (パン酵母)

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分子 #1: Proteasome subunit alpha type-1

分子名称: Proteasome subunit alpha type-1 / タイプ: protein_or_peptide / ID: 1 / コピー数: 2 / 光学異性体: LEVO / EC番号: proteasome endopeptidase complex
由来(天然)生物種: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (パン酵母)
分子量理論値: 27.359104 KDa
配列文字列: SAAGYDRHIT IFSPEGRLYQ VEYAFKATNQ TNINSLAVRG KDCTVVISQK KVPDKLLDPT TVSYIFCISR TIGMVVNGPI PDARNAALR AKAEAAEFRY KYGYDMPCDV LAKRMANLSQ IYTQRAYMRP LGVILTFVSV DEELGPSIYK TDPAGYYVGY K ATATGPKQ ...文字列:
SAAGYDRHIT IFSPEGRLYQ VEYAFKATNQ TNINSLAVRG KDCTVVISQK KVPDKLLDPT TVSYIFCISR TIGMVVNGPI PDARNAALR AKAEAAEFRY KYGYDMPCDV LAKRMANLSQ IYTQRAYMRP LGVILTFVSV DEELGPSIYK TDPAGYYVGY K ATATGPKQ QEITTNLENH FKKSKIDHIN EESWEKVVEF AITHMIDALG TEFSKNDLEV GVATKDKFFT LSAENIEERL VA IAEQ

UniProtKB: Proteasome subunit alpha type-1

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分子 #2: Proteasome subunit alpha type-2

分子名称: Proteasome subunit alpha type-2 / タイプ: protein_or_peptide / ID: 2 / コピー数: 2 / 光学異性体: LEVO / EC番号: proteasome endopeptidase complex
由来(天然)生物種: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (パン酵母)
分子量理論値: 26.959527 KDa
配列文字列: DRYSFSLTTF SPSGKLGQID YALTAVKQGV TSLGIKATNG VVIATEKKSS SPLAMSETLS KVSLLTPDIG AVYSGMGPDY RVLVDKSRK VAHTSYKRIY GEYPPTKLLV SEVAKIMQEA TQSGGVRPFG VSLLIAGHDE FNGFSLYQVD PSGSYFPWKA T AIGKGSVA ...文字列:
DRYSFSLTTF SPSGKLGQID YALTAVKQGV TSLGIKATNG VVIATEKKSS SPLAMSETLS KVSLLTPDIG AVYSGMGPDY RVLVDKSRK VAHTSYKRIY GEYPPTKLLV SEVAKIMQEA TQSGGVRPFG VSLLIAGHDE FNGFSLYQVD PSGSYFPWKA T AIGKGSVA AKTFLEKRWN DELELEDAIH IALLTLKESV EGEFNGDTIE LAIIGDENPD LLGYTGIPTD KGPRFRKLTS QE INDRLEA L

UniProtKB: Proteasome subunit alpha type-2

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分子 #3: Proteasome subunit alpha type-3

分子名称: Proteasome subunit alpha type-3 / タイプ: protein_or_peptide / ID: 3 / コピー数: 2 / 光学異性体: LEVO / EC番号: proteasome endopeptidase complex
由来(天然)生物種: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (パン酵母)
分子量理論値: 26.74909 KDa
配列文字列: RYDSRTTIFS PEGRLYQVEY ALESISHAGT AIGIMASDGI VLAAERKVTS TLLEQDTSTE KLYKLNDKIA VAVAGLTADA EILINTARI HAQNYLKTYN EDIPVEILVR RLSDIKQGYT QHGGLRPFGV SFIYAGYDDR YGYQLYTSNP SGNYTGWKAI S VGANTSAA ...文字列:
RYDSRTTIFS PEGRLYQVEY ALESISHAGT AIGIMASDGI VLAAERKVTS TLLEQDTSTE KLYKLNDKIA VAVAGLTADA EILINTARI HAQNYLKTYN EDIPVEILVR RLSDIKQGYT QHGGLRPFGV SFIYAGYDDR YGYQLYTSNP SGNYTGWKAI S VGANTSAA QTLLQMDYKD DMKVDDAIEL ALKTLSKTTD SSALTYDRLE FATIRKGAND GEVYQKIFKP QEIKDILVKT GI T

UniProtKB: Proteasome subunit alpha type-3

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分子 #4: Proteasome subunit alpha type-4

分子名称: Proteasome subunit alpha type-4 / タイプ: protein_or_peptide / ID: 4 / コピー数: 2 / 光学異性体: LEVO / EC番号: proteasome endopeptidase complex
由来(天然)生物種: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (パン酵母)
分子量理論値: 28.259838 KDa
配列文字列: GYDRALSIFS PDGHIFQVEY ALEAVKRGTC AVGVKGKNCV VLGCERRSTL KLQDTRITPS KVSKIDSHVV LSFSGLNADS RILIEKARV EAQSHRLTLE DPVTVEYLTR YVAGVQQRYT QSGGVRPFGV STLIAGFDPR DDEPKLYQTE PSGIYSSWSA Q TIGRNSKT ...文字列:
GYDRALSIFS PDGHIFQVEY ALEAVKRGTC AVGVKGKNCV VLGCERRSTL KLQDTRITPS KVSKIDSHVV LSFSGLNADS RILIEKARV EAQSHRLTLE DPVTVEYLTR YVAGVQQRYT QSGGVRPFGV STLIAGFDPR DDEPKLYQTE PSGIYSSWSA Q TIGRNSKT VREFLEKNYD RKEPPATVEE CVKLTVRSLL EVVQTGAKNI EITVVKPDSD IVALSSEEIN QYVTQIEQEK QE QQEQDKK KKSNH

UniProtKB: Proteasome subunit alpha type-4

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分子 #5: Proteasome subunit alpha type-5

分子名称: Proteasome subunit alpha type-5 / タイプ: protein_or_peptide / ID: 5 / コピー数: 2 / 光学異性体: LEVO / EC番号: proteasome endopeptidase complex
由来(天然)生物種: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (パン酵母)
分子量理論値: 26.924156 KDa
配列文字列: SEYDRGVSTF SPEGRLFQVE YSLEAIKLGS TAIGIATKEG VVLGVEKRAT SPLLESDSIE KIVEIDRHIG CAMSGLTADA RSMIEHART AAVTHNLYYD EDINVESLTQ SVCDLALRFG EGASGEERLM SRPFGVALLI AGHDADDGYQ LFHAEPSGTF Y RYNAKAIG ...文字列:
SEYDRGVSTF SPEGRLFQVE YSLEAIKLGS TAIGIATKEG VVLGVEKRAT SPLLESDSIE KIVEIDRHIG CAMSGLTADA RSMIEHART AAVTHNLYYD EDINVESLTQ SVCDLALRFG EGASGEERLM SRPFGVALLI AGHDADDGYQ LFHAEPSGTF Y RYNAKAIG SGSEGAQAEL LNEWHSSLTL KEAELLVLKI LKQVMEEKLD ENNAQLSCIT KQDGFKIYDN EKTAELIKEL KE KEAAE

UniProtKB: Proteasome subunit alpha type-5

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分子 #6: Proteasome subunit alpha type-6

分子名称: Proteasome subunit alpha type-6 / タイプ: protein_or_peptide / ID: 6 / コピー数: 2 / 光学異性体: LEVO / EC番号: proteasome endopeptidase complex
由来(天然)生物種: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (パン酵母)
分子量理論値: 25.355631 KDa
配列文字列: RNNYDGDTVT FSPTGRLFQV EYALEAIKQG SVTVGLRSNT HAVLVALKRN ADELSSYQKK IIKCDEHMGL SLAGLAPDAR VLSNYLRQQ CNYSSLVFNR KLAVERAGHL LCDKAQKNTQ SYGGRPYGVG LLIIGYDKSG AHLLEFQPSG NVTELYGTAI G ARSQGAKT ...文字列:
RNNYDGDTVT FSPTGRLFQV EYALEAIKQG SVTVGLRSNT HAVLVALKRN ADELSSYQKK IIKCDEHMGL SLAGLAPDAR VLSNYLRQQ CNYSSLVFNR KLAVERAGHL LCDKAQKNTQ SYGGRPYGVG LLIIGYDKSG AHLLEFQPSG NVTELYGTAI G ARSQGAKT YLERTLDTFI KIDGNPDELI KAGVEAISQS LRDESLTVDN LSIAIVGKDT PFTIYDGEAV AKYI

UniProtKB: Proteasome subunit alpha type-6

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分子 #7: Probable proteasome subunit alpha type-7

分子名称: Probable proteasome subunit alpha type-7 / タイプ: protein_or_peptide / ID: 7 / コピー数: 2 / 光学異性体: LEVO / EC番号: proteasome endopeptidase complex
由来(天然)生物種: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (パン酵母)
分子量理論値: 27.005641 KDa
配列文字列: IGTGYDLSNS VFSPDGRNFQ VEYAVKAVEN GTTSIGIKCN DGVVFAVEKL ITSKLLVPQK NVKIQVVDRH IGCVYSGLIP DGRHLVNRG REEAASFKKL YKTPIPIPAF ADRLGQYVQA HTLYNSVRPF GVSTIFGGVD KNGAHLYMLE PSGSYWGYKG A ATGKGRQS ...文字列:
IGTGYDLSNS VFSPDGRNFQ VEYAVKAVEN GTTSIGIKCN DGVVFAVEKL ITSKLLVPQK NVKIQVVDRH IGCVYSGLIP DGRHLVNRG REEAASFKKL YKTPIPIPAF ADRLGQYVQA HTLYNSVRPF GVSTIFGGVD KNGAHLYMLE PSGSYWGYKG A ATGKGRQS AKAELEKLVD HHPEGLSARE AVKQAAKIIY LAHEDNKEKD FELEISWCSL SETNGLHKFV KGDLLQEAID FA QKEIN

UniProtKB: Phospho-2-dehydro-3-deoxyheptonate aldolase

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分子 #8: Proteasome subunit beta type-1

分子名称: Proteasome subunit beta type-1 / タイプ: protein_or_peptide / ID: 8 / コピー数: 2 / 光学異性体: LEVO / EC番号: proteasome endopeptidase complex
由来(天然)生物種: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (パン酵母)
分子量理論値: 21.517186 KDa
配列文字列: TSIMAVTFKD GVILGADSRT TTGAYIANRV TDKLTRVHDK IWCCRSGSAA DTQAIADIVQ YHLELYTSQY GTPSTETAAS VFKELCYEN KDNLTAGIIV AGYDDKNKGE VYTIPLGGSV HKLPYAIAGS GSTFIYGYCD KNFRENMSKE ETVDFIKHSL S QAIKWDGS ...文字列:
TSIMAVTFKD GVILGADSRT TTGAYIANRV TDKLTRVHDK IWCCRSGSAA DTQAIADIVQ YHLELYTSQY GTPSTETAAS VFKELCYEN KDNLTAGIIV AGYDDKNKGE VYTIPLGGSV HKLPYAIAGS GSTFIYGYCD KNFRENMSKE ETVDFIKHSL S QAIKWDGS SGGVIRMVVL TAAGVERLIF YPDEYEQL

UniProtKB: Proteasome subunit beta type-1

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分子 #9: Proteasome subunit beta type-2

分子名称: Proteasome subunit beta type-2 / タイプ: protein_or_peptide / ID: 9 / コピー数: 2 / 光学異性体: LEVO / EC番号: proteasome endopeptidase complex
由来(天然)生物種: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (パン酵母)
分子量理論値: 24.48677 KDa
配列文字列: TTIVGVKFNN GVVIAADTRS TQGPIVADKN CAKLHRISPK IWCAGAGTAA DTEAVTQLIG SNIELHSLYT SREPRVVSAL QMLKQHLFK YQGHIGAYLI VAGVDPTGSH LFSIHAHGST DVGYYLSLGS GSLAAMAVLE SHWKQDLTKE EAIKLASDAI Q AGIWNDLG ...文字列:
TTIVGVKFNN GVVIAADTRS TQGPIVADKN CAKLHRISPK IWCAGAGTAA DTEAVTQLIG SNIELHSLYT SREPRVVSAL QMLKQHLFK YQGHIGAYLI VAGVDPTGSH LFSIHAHGST DVGYYLSLGS GSLAAMAVLE SHWKQDLTKE EAIKLASDAI Q AGIWNDLG SGSNVDVCVM EIGKDAEYLR NYLTPNVREE KQKSYKFPRG TTAVLKESIV NICDIQEE

UniProtKB: Proteasome subunit beta type-2

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分子 #10: Proteasome subunit beta type-3

分子名称: Proteasome subunit beta type-3 / タイプ: protein_or_peptide / ID: 10 / コピー数: 2 / 光学異性体: LEVO / EC番号: proteasome endopeptidase complex
由来(天然)生物種: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (パン酵母)
分子量理論値: 22.496645 KDa
配列文字列: SDPSSINGGI VVAMTGKDCV AIACDLRLGS QSLGVSNKFE KIFHYGHVFL GITGLATDVT TLNEMFRYKT NLYKLKEERA IEPETFTQL VSSSLYERRF GPYFVGPVVA GINSKSGKPF IAGFDLIGCI DEAKDFIVSG TASDQLFGMC ESLYEPNLEP E DLFETISQ ...文字列:
SDPSSINGGI VVAMTGKDCV AIACDLRLGS QSLGVSNKFE KIFHYGHVFL GITGLATDVT TLNEMFRYKT NLYKLKEERA IEPETFTQL VSSSLYERRF GPYFVGPVVA GINSKSGKPF IAGFDLIGCI DEAKDFIVSG TASDQLFGMC ESLYEPNLEP E DLFETISQ ALLNAADRDA LSGWGAVVYI IKKDEVVKRY LKMRQD

UniProtKB: Proteasome subunit beta type-3

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分子 #11: Proteasome subunit beta type-4

分子名称: Proteasome subunit beta type-4 / タイプ: protein_or_peptide / ID: 11 / コピー数: 2 / 光学異性体: LEVO / EC番号: proteasome endopeptidase complex
由来(天然)生物種: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (パン酵母)
分子量理論値: 22.218338 KDa
配列文字列: MDIILGIRVQ DSVILASSKA VTRGISVLKD SDDKTRQLSP HTLMSFAGEA GDTVQFAEYI QANIQLYSIR EDYELSPQAV SSFVRQELA KSIRSRRPYQ VNVLIGGYDK KKNKPELYQI DYLGTKVELP YGAHGYSGFY TFSLLDHHYR PDMTTEEGLD L LKLCVQEL ...文字列:
MDIILGIRVQ DSVILASSKA VTRGISVLKD SDDKTRQLSP HTLMSFAGEA GDTVQFAEYI QANIQLYSIR EDYELSPQAV SSFVRQELA KSIRSRRPYQ VNVLIGGYDK KKNKPELYQI DYLGTKVELP YGAHGYSGFY TFSLLDHHYR PDMTTEEGLD L LKLCVQEL EKRMPMDFKG VIVKIVDKDG IRQVDDF

UniProtKB: Proteasome subunit beta type-4

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分子 #12: Proteasome subunit beta type-5

分子名称: Proteasome subunit beta type-5 / タイプ: protein_or_peptide / ID: 12 / コピー数: 2 / 光学異性体: LEVO / EC番号: proteasome endopeptidase complex
由来(天然)生物種: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (パン酵母)
分子量理論値: 23.325248 KDa
配列文字列: TTTLAFRFQG GIIVAVDSRA TAGNWVASQT VKKVIEINPF LLGTMAGGAA DCQFWETWLG SQCRLHELRE KERISVAAAS KILSNLVYQ YKGAGLSMGT MICGYTRKEG PTIYYVDSDG TRLKGDIFCV GSGQTFAYGV LDSNYKWDLS VEDALYLGKR S ILAAAHRD ...文字列:
TTTLAFRFQG GIIVAVDSRA TAGNWVASQT VKKVIEINPF LLGTMAGGAA DCQFWETWLG SQCRLHELRE KERISVAAAS KILSNLVYQ YKGAGLSMGT MICGYTRKEG PTIYYVDSDG TRLKGDIFCV GSGQTFAYGV LDSNYKWDLS VEDALYLGKR S ILAAAHRD AYSGGSVNLY HVTEDGWIYH GNHDVGELFW KVKEEEGSFN NVIG

UniProtKB: Proteasome subunit beta type-5

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分子 #13: Proteasome subunit beta type-6

分子名称: Proteasome subunit beta type-6 / タイプ: protein_or_peptide / ID: 13 / コピー数: 2 / 光学異性体: LEVO / EC番号: proteasome endopeptidase complex
由来(天然)生物種: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (パン酵母)
分子量理論値: 24.883928 KDa
配列文字列: QFNPYGDNGG TILGIAGEDF AVLAGDTRNI TDYSINSRYE PKVFDCGDNI VMSANGFAAD GDALVKRFKN SVKWYHFDHN DKKLSINSA ARNIQHLLYG KRFFPYYVHT IIAGLDEDGK GAVYSFDPVG SYEREQCRAG GAAASLIMPF LDNQVNFKNQ Y EPGTNGKV ...文字列:
QFNPYGDNGG TILGIAGEDF AVLAGDTRNI TDYSINSRYE PKVFDCGDNI VMSANGFAAD GDALVKRFKN SVKWYHFDHN DKKLSINSA ARNIQHLLYG KRFFPYYVHT IIAGLDEDGK GAVYSFDPVG SYEREQCRAG GAAASLIMPF LDNQVNFKNQ Y EPGTNGKV KKPLKYLSVE EVIKLVRDSF TSATERHIQV GDGLEILIVT KDGVRKEFYE LKRD

UniProtKB: Proteasome subunit beta type-6

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分子 #14: Proteasome subunit beta type-7

分子名称: Proteasome subunit beta type-7 / タイプ: protein_or_peptide / ID: 14 / コピー数: 2 / 光学異性体: LEVO / EC番号: proteasome endopeptidase complex
由来(天然)生物種: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (パン酵母)
分子量理論値: 25.832336 KDa
配列文字列: TQQPIVTGTS VISMKYDNGV IIAADNLGSY GSLLRFNGVE RLIPVGDNTV VGISGDISDM QHIERLLKDL VTENAYDNPL ADAEEALEP SYIFEYLATV MYQRRSKMNP LWNAIIVAGV QSNGDQFLRY VNLLGVTYSS PTLATGFGAH MANPLLRKVV D RESDIPKT ...文字列:
TQQPIVTGTS VISMKYDNGV IIAADNLGSY GSLLRFNGVE RLIPVGDNTV VGISGDISDM QHIERLLKDL VTENAYDNPL ADAEEALEP SYIFEYLATV MYQRRSKMNP LWNAIIVAGV QSNGDQFLRY VNLLGVTYSS PTLATGFGAH MANPLLRKVV D RESDIPKT TVQVAEEAIV NAMRVLYYRD ARSSRNFSLA IIDKNTGLTF KKNLQVENMK WDFAKDIKGY GTQK

UniProtKB: Proteasome subunit beta type-7

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分子 #15: 26S proteasome regulatory subunit RPN10

分子名称: 26S proteasome regulatory subunit RPN10 / タイプ: protein_or_peptide / ID: 15 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (パン酵母)
分子量理論値: 21.818613 KDa
配列文字列: MVLEATVLVI DNSEYSRNGD FPRTRFEAQI DSVEFIFQAK RNSNPENTVG LISGAGANPR VLSTFTAEFG KILAGLHDTQ IEGKLHMAT ALQIAQLTLK HRQNKVQHQR IVAFVCSPIS DSRDELIRLA KTLKKNNVAV DIINFGEIEQ NTELLDEFIA A VNNPQEET ...文字列:
MVLEATVLVI DNSEYSRNGD FPRTRFEAQI DSVEFIFQAK RNSNPENTVG LISGAGANPR VLSTFTAEFG KILAGLHDTQ IEGKLHMAT ALQIAQLTLK HRQNKVQHQR IVAFVCSPIS DSRDELIRLA KTLKKNNVAV DIINFGEIEQ NTELLDEFIA A VNNPQEET SHLLTVTPGP RLLYENIASS PIILEEGSS

UniProtKB: 26S proteasome regulatory subunit RPN10

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分子 #16: Ubiquitin carboxyl-terminal hydrolase RPN11

分子名称: Ubiquitin carboxyl-terminal hydrolase RPN11 / タイプ: protein_or_peptide / ID: 16 / コピー数: 1 / 光学異性体: LEVO / EC番号: ubiquitinyl hydrolase 1
由来(天然)生物種: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (パン酵母)
分子量理論値: 32.490963 KDa
配列文字列: TGRDDTKETV YISSIALLKM LKHGRAGVPM EVMGLMLGEF VDDYTVNVVD VFAMPQSGTG VSVEAVDDVF QAKMMDMLKQ TGRDQMVVG WYHSHPGFGC WLSSVDVNTQ KSFEQLNSRA VAVVVDPIQS VKGKVVIDAF RLIDTGALIN NLEPRQTTSN T GLLNKANI ...文字列:
TGRDDTKETV YISSIALLKM LKHGRAGVPM EVMGLMLGEF VDDYTVNVVD VFAMPQSGTG VSVEAVDDVF QAKMMDMLKQ TGRDQMVVG WYHSHPGFGC WLSSVDVNTQ KSFEQLNSRA VAVVVDPIQS VKGKVVIDAF RLIDTGALIN NLEPRQTTSN T GLLNKANI QALIHGLNRH YYSLNIDYHK TAKETKMLMN LHKEQWQSGL KMYDYEEKEE SNLAATKSMV KIAEQYSKRI EE EKELTEE ELKTRYVGRQ DPKKHLSETA DETLENNIVS VLTAGVNSVA IK

UniProtKB: Ubiquitin carboxyl-terminal hydrolase RPN11

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分子 #17: 26S proteasome regulatory subunit RPN12

分子名称: 26S proteasome regulatory subunit RPN12 / タイプ: protein_or_peptide / ID: 17 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (パン酵母)
分子量理論値: 31.111098 KDa
配列文字列: LTKSLSIAFE NGDYAACEKL LPPIKIELIK NNLLIPDLSI QNDIYLNDLM ITKRILEVGA LASIQTFNFD SFENYFNQLK PYYFSNNHK LSESDKKSKL ISLYLLNLLS QNNTTKFHSE LQYLDKHIKN LEDDSLLSYP IKLDRWLMEG SYQKAWDLLQ S GSQNISEF ...文字列:
LTKSLSIAFE NGDYAACEKL LPPIKIELIK NNLLIPDLSI QNDIYLNDLM ITKRILEVGA LASIQTFNFD SFENYFNQLK PYYFSNNHK LSESDKKSKL ISLYLLNLLS QNNTTKFHSE LQYLDKHIKN LEDDSLLSYP IKLDRWLMEG SYQKAWDLLQ S GSQNISEF DSFTDILKSA IRDEIAKNTE LSYDFLPLSN IKALLFFNNE KETEKFALER NWPIVNSKVY FNNQSKEKAD YE DEMMHEE DQKTNIIEKA MDYAISIEN

UniProtKB: 26S proteasome regulatory subunit RPN12

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分子 #18: 26S proteasome regulatory subunit RPN13

分子名称: 26S proteasome regulatory subunit RPN13 / タイプ: protein_or_peptide / ID: 18 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (パン酵母)
分子量理論値: 14.654642 KDa
配列文字列:
VIKFRAGVCE YNEDSRLCTP IPVQGEIEIK PNEEEELGFW DFEWRPTEKP VGRELDPISL ILIPGETMWV PIKSSKSGRI FALVFSSNE RYFFWLQEKN SGNLPLNELS AKDKEIYNKM IGVLNNSS

UniProtKB: 26S proteasome regulatory subunit RPN13

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分子 #19: 26S proteasome complex subunit SEM1

分子名称: 26S proteasome complex subunit SEM1 / タイプ: protein_or_peptide / ID: 19 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (パン酵母)
分子量理論値: 10.397102 KDa
配列文字列:
MSTDVAAAQA QSKIDLTKKK NEEINKKSLE EDDEFEDFPI DTWANGETIK SNAVTQTNIW EENWDDVEVD DDFTNELKAE LDRYKRENQ

UniProtKB: 26S proteasome complex subunit SEM1

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分子 #20: 26S proteasome regulatory subunit RPN1

分子名称: 26S proteasome regulatory subunit RPN1 / タイプ: protein_or_peptide / ID: 20 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (パン酵母)
分子量理論値: 106.895875 KDa
配列文字列: MVDESDKKQQ TIDEQSQISP EKQTPNKKDK KKEEEEQLSE EDAKLKTDLE LLVERLKEDD SSLYEASLNA LKESIKNSTS SMTAVPKPL KFLRPTYPDL CSIYDKWTDP NLKSSLADVL SILAMTYSEN GKHDSLRYRL LSDVSDFEGW GHEYIRHLAL E IGEVYNDQ ...文字列:
MVDESDKKQQ TIDEQSQISP EKQTPNKKDK KKEEEEQLSE EDAKLKTDLE LLVERLKEDD SSLYEASLNA LKESIKNSTS SMTAVPKPL KFLRPTYPDL CSIYDKWTDP NLKSSLADVL SILAMTYSEN GKHDSLRYRL LSDVSDFEGW GHEYIRHLAL E IGEVYNDQ VEKDAEDETS SDGSKSDGSA ATSGFEFSKE DTLRLCLDIV PYFLKHNGEE DAVDLLLEIE SIDKLPQFVD EN TFQRVCQ YMVACVPLLP PPEDVAFLKT AYSIYLSQNE LTDAIALAVR LGEEDMIRSV FDATSDPVMH KQLAYILAAQ KTS FEYEGV QDIIGNGKLS EHFLYLAKEL NLTGPKVPED IYKSHLDNSK SVFSSAGLDS AQQNLASSFV NGFLNLGYCN DKLI VDNDN WVYKTKGDGM TSAVASIGSI YQWNLDGLQQ LDKYLYVDEP EVKAGALLGI GISASGVHDG EVEPALLLLQ DYVTN PDTK ISSAAILGLG IAFAGSKNDE VLGLLLPIAA STDLPIETAA MASLALAHVF VGTCNGDITT SIMDNFLERT AIELKT DWV RFLALALGIL YMGQGEQVDD VLETISAIEH PMTSAIEVLV GSCAYTGTGD VLLIQDLLHR LTPKNVKGEE DADEEET AE GQTNSISDFL GEQVNEPTKN EEAEIEVDEM EVDAEGEEVE VKAEITEKKN GESLEGEEIK SEEKKGKSSD KDATTDGK N DDEEEEKEAG IVDELAYAVL GIALIALGED IGKEMSLRHF GHLMHYGNEH IRRMVPLAMG IVSVSDPQMK VFDTLTRFS HDADLEVSMN SIFAMGLCGA GTNNARLAQL LRQLASYYSR EQDALFITRL AQGLLHLGKG TMTMDVFNDA HVLNKVTLAS ILTTAVGLV SPSFMLKHHQ LFYMLNAGIR PKFILALNDE GEPIKVNVRV GQAVETVGQA GRPKKITGWI TQSTPVLLNH G ERAELETD EY

UniProtKB: 26S proteasome regulatory subunit RPN1

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分子 #21: 26S proteasome regulatory subunit RPN2

分子名称: 26S proteasome regulatory subunit RPN2 / タイプ: protein_or_peptide / ID: 21 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (パン酵母)
分子量理論値: 101.894094 KDa
配列文字列: TTAAPLLALL RENQDSVKTY ALESINNVVD QLWSEISNEL PDIEALYDDD TFSDREMAAL IASKVYYNLG EYESAVKYAL AAKDRFDID EKSQFVETIV SKSIEMYVQE ASKQYTKDEQ FYTKDIIDPK LTSIFERMIE KCLKASELKL ALGIALEGYR L DIIESALK ...文字列:
TTAAPLLALL RENQDSVKTY ALESINNVVD QLWSEISNEL PDIEALYDDD TFSDREMAAL IASKVYYNLG EYESAVKYAL AAKDRFDID EKSQFVETIV SKSIEMYVQE ASKQYTKDEQ FYTKDIIDPK LTSIFERMIE KCLKASELKL ALGIALEGYR L DIIESALK SKLDQDSTSE NVKIINYLLT LAITTVTNSK FRSSILRKSF DFLMNMPNCD YLTLNKVVVN LNDAGLALQL FK KLKEEND EGLSAQIAFD LVSSASQQLL EILVTELTAQ GYDPALLNIL SGLPTCDYYN TFLLNNKNID IGLLNKSKSS LDG KFSLFH TAVSVANGFM HAGTTDNSFI KANLPWLGKA QNWAKFTATA SLGVIHKGNL LEGKKVMAPY LPGSRASSRF IKGG SLYGL GLIYAGFGRD TTDYLKNIIV ENSGTSGDED VDVLLHGASL GIGLAAMGSA NIEVYEALKE VLYNDSATSG EAAAL GMGL CMLGTGKPEA IHDMFTYSQE TQHGNITRGL AVGLALINYG RQELADDLIT KMLASDESLL RYGGAFTIAL AYAGTG NNS AVKRLLHVAV SDSNDDVRRA AVIALGFVLL RDYTTVPRIV QLLSKSHNAH VRCGTAFALG IACAGKGLQS AIDVLDP LT KDPVDFVRQA AMIALSMILI QQTEKLNPQV ADINKNFLSV ITNKHQEGLA KFGACVAQGI MNAGGRNVTI QLENADTG T LDTKSVVGLV MFSQFWYWFP LAHFLSLSFT PTTVIGIRGS DQAIPKFQMN CYAKEDAFSY PRMYEEASGK EVEKVATAV LSTTARAKAR AKKTKKEKGP NEEEKKKEHE EKEKERETNK KGIKETKEND EEFYKNKYSS KPYKVDNMTR ILPQQSRYIS FIKDDRFVP VRKFKGNNGV VVLRDREPKE PVALIETVRQ MKD

UniProtKB: 26S proteasome regulatory subunit RPN2

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分子 #22: 26S proteasome regulatory subunit RPN3

分子名称: 26S proteasome regulatory subunit RPN3 / タイプ: protein_or_peptide / ID: 22 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (パン酵母)
分子量理論値: 55.378328 KDa
配列文字列: LHHSEKKYAE EDQVQELLKV LNEISKTTLT LDPRYIWRSL KDLSSLRNQE LLNAETLCFT VNVLYPDSSS FKKNLLKFIT SNHKSSVPG SAELRNSYPA SFYSVNTEKK TIEVTAEINC FMHLLVQLFL WDSKELEQLV EFNRKVVIPN LLCYYNLRSL N LINAKLWF ...文字列:
LHHSEKKYAE EDQVQELLKV LNEISKTTLT LDPRYIWRSL KDLSSLRNQE LLNAETLCFT VNVLYPDSSS FKKNLLKFIT SNHKSSVPG SAELRNSYPA SFYSVNTEKK TIEVTAEINC FMHLLVQLFL WDSKELEQLV EFNRKVVIPN LLCYYNLRSL N LINAKLWF YIYLSHETLA RSSEEINSDN QNIILRSTMM KFLKIASLKH DNETKAMLIN LILRDFLNNG EVDSASDFIS KL EYPHTDV SSSLEARYFF YLSKINAIQL DYSTANEYII AAIRKAPHNS KSLGFLQQSN KLHCCIQLLM GDIPELSFFH QSN MQKSLL PYYHLTKAVK LGDLKKFTST ITKYKQLLLK DDTYQLCVRL RSNVIKTGIR IISLTYKKIS LRDICLKLNL DSEQ TVEYM VSRAIRDGVI EAKINHEDGF IETTELLNIY DSEDPQQVFD ERIKFANQLH DEYLVSMRYP EDKKTQQNEK

UniProtKB: 26S proteasome regulatory subunit RPN3

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分子 #23: 26S proteasome regulatory subunit RPN5

分子名称: 26S proteasome regulatory subunit RPN5 / タイプ: protein_or_peptide / ID: 23 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (パン酵母)
分子量理論値: 51.341758 KDa
配列文字列: MSRDAPIKAD KDYSQILKEE FPKIDSLAQN DCNSALDQLL VLEKKTRQAS DLASSKEVLA KIVDLLASRN KWDDLNEQLT LLSKKHGQL KLSIQYMIQK VMEYLKSSKS LDLNTRISVI ETIRVVTENK IFVEVERARV TKDLVEIKKE EGKIDEAADI L CELQVETY ...文字列:
MSRDAPIKAD KDYSQILKEE FPKIDSLAQN DCNSALDQLL VLEKKTRQAS DLASSKEVLA KIVDLLASRN KWDDLNEQLT LLSKKHGQL KLSIQYMIQK VMEYLKSSKS LDLNTRISVI ETIRVVTENK IFVEVERARV TKDLVEIKKE EGKIDEAADI L CELQVETY GSMEMSEKIQ FILEQMELSI LKGDYSQATV LSRKILKKTF KNPKYESLKL EYYNLLVKIS LHKREYLEVA QY LQEIYQT DAIKSDEAKW KPVLSHIVYF LVLSPYGNLQ NDLIHKIQND NNLKKLESQE SLVKLFTTNE LMRWPIVQKT YEP VLNEDD LAFGGEANKH HWEDLQKRVI EHNLRVISEY YSRITLLRLN ELLDLTESQT ETYISDLVNQ GIIYAKVNRP AKIV NFEKP KNSSQLLNEW SHNVDELLEH IETIGHLITK EEIMH

UniProtKB: 26S proteasome regulatory subunit RPN5

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分子 #24: 26S proteasome regulatory subunit RPN6

分子名称: 26S proteasome regulatory subunit RPN6 / タイプ: protein_or_peptide / ID: 24 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (パン酵母)
分子量理論値: 49.839812 KDa
配列文字列: MSLPGSKLEE ARRLVNEKQY NEAEQVYLSL LDKDSSQSSA AAGASVDDKR RNEQETSILE LGQLYVTMGA KDKLREFIPH STEYMMQFA KSKTVKVLKT LIEKFEQVPD SLDDQIFVCE KSIEFAKREK RVFLKHSLSI KLATLHYQKK QYKDSLALIN D LLREFKKL ...文字列:
MSLPGSKLEE ARRLVNEKQY NEAEQVYLSL LDKDSSQSSA AAGASVDDKR RNEQETSILE LGQLYVTMGA KDKLREFIPH STEYMMQFA KSKTVKVLKT LIEKFEQVPD SLDDQIFVCE KSIEFAKREK RVFLKHSLSI KLATLHYQKK QYKDSLALIN D LLREFKKL DDKPSLVDVH LLESKVYHKL RNLAKSKASL TAARTAANSI YCPTQTVAEL DLMSGILHCE DKDYKTAFSY FF ESFESYH NLTTHNSYEK ACQVLKYMLL SKIMLNLIDD VKNILNAKYT KETYQSRGID AMKAVAEAYN NRSLLDFNTA LKQ YEKELM GDELTRSHFN ALYDTLLESN LCKIIEPFEC VEISHISKII GLDTQQVEGK LSQMILDKIF YGVLDQGNGW LYVY ETPNQ DATYDSALEL VGQLNKVVDQ LFEKASVLY

UniProtKB: 26S proteasome regulatory subunit RPN6

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分子 #25: 26S proteasome regulatory subunit RPN7

分子名称: 26S proteasome regulatory subunit RPN7 / タイプ: protein_or_peptide / ID: 25 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (パン酵母)
分子量理論値: 46.307477 KDa
配列文字列: RVPNYEVSEK AFLLTQSKVS IEQRKEAAEF VLAKIKEEEM APYYKYLCEE YLVNNGQSDL EHDEKSDSLN EWIKFDQELY NELCKKNES KIKELNEKIQ KLEEDDEGEL EQAQAWINLG EYYAQIGDKD NAEKTLGKSL SKAISTGAKI DVMLTIARLG F FYNDQLYV ...文字列:
RVPNYEVSEK AFLLTQSKVS IEQRKEAAEF VLAKIKEEEM APYYKYLCEE YLVNNGQSDL EHDEKSDSLN EWIKFDQELY NELCKKNES KIKELNEKIQ KLEEDDEGEL EQAQAWINLG EYYAQIGDKD NAEKTLGKSL SKAISTGAKI DVMLTIARLG F FYNDQLYV KEKLEAVNSM IEKGGDWERR NRYKTYYGIH CLAVRNFKEA AKLLVDSLAT FTSIELTSYE SIATYASVTG LF TLERTDL KSKVIDSPEL LSLISTTAAL QSISSLTISL YASDYASYFP YLLETYANVL IPCKYLNRHA DFFVREMRRK VYA QLLESY KTLSLKSMAS AFGVSVAFLD NDLGKFIPNK QLNCVIDRVN GIVETNRPDN KNAQYHLLVK QGDGLLTKLQ KYGA AVRLT

UniProtKB: 26S proteasome regulatory subunit RPN7

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分子 #26: 26S proteasome regulatory subunit RPN8

分子名称: 26S proteasome regulatory subunit RPN8 / タイプ: protein_or_peptide / ID: 26 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (パン酵母)
分子量理論値: 34.557316 KDa
配列文字列: MSLQHEKVTI APLVLLSALD HYERTQTKEN KRCVGVILGD ANSSTIRVTN SFALPFEEDE KNSDVWFLDH NYIENMNEMC KKINAKEKL IGWYHSGPKL RASDLKINEL FKKYTQNNPL LLIVDVKQQG VGLPTDAYVA IEQVKDDGTS TEKTFLHLPC T IEAEEAEE ...文字列:
MSLQHEKVTI APLVLLSALD HYERTQTKEN KRCVGVILGD ANSSTIRVTN SFALPFEEDE KNSDVWFLDH NYIENMNEMC KKINAKEKL IGWYHSGPKL RASDLKINEL FKKYTQNNPL LLIVDVKQQG VGLPTDAYVA IEQVKDDGTS TEKTFLHLPC T IEAEEAEE IGVEHLLRDV RDQAAGGLSI RLTNQLKSLK GLQSKLKDVV EYLDKVINKE LPINHTILGK LQDVFNLLPN LG TPDDDEI DVENHDRINI SNNLQKALTV KTNDELMVIY ISNLVRSIIA FDDLIENKIQ NKKIQEQ

UniProtKB: 26S proteasome regulatory subunit RPN8

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分子 #27: 26S proteasome regulatory subunit RPN9

分子名称: 26S proteasome regulatory subunit RPN9 / タイプ: protein_or_peptide / ID: 27 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (パン酵母)
分子量理論値: 45.194625 KDa
配列文字列: EIDTILSTLR MEADPSLHPL FEQFEKFYEE KLWFQLSESL TKFFDDAKST PLRLRLYDNF VSKFYDKINQ LSVVKYLLAS LKDSKDFDE SLKYLDDLKA QFQELDSKKQ RNNGSKDHGD GILLIDSEIA RTYLLKNDLV KARDLLDDLE KTLDKKDSIP L RITNSFYS ...文字列:
EIDTILSTLR MEADPSLHPL FEQFEKFYEE KLWFQLSESL TKFFDDAKST PLRLRLYDNF VSKFYDKINQ LSVVKYLLAS LKDSKDFDE SLKYLDDLKA QFQELDSKKQ RNNGSKDHGD GILLIDSEIA RTYLLKNDLV KARDLLDDLE KTLDKKDSIP L RITNSFYS TNSQYFKFKN DFNSFYYTSL LYLSTLEPST SITLAERQQL AYDLSISALL GDKIYNFGEL LHHPIMETIV ND SNYDWLF QLLNALTVGD FDKFDSLIKV QISKIPILAQ HESFLRQKIC LMTLIETVFV KNIRMLSFED ISKATHLPKD NVE HLVMRA ISLGLLKGSI DQVNELVTIS WVQPRIISGD QITKMKDRLV EWNDQVEKLG KKMEARGQSI WV

UniProtKB: 26S proteasome regulatory subunit RPN9

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分子 #28: 26S proteasome regulatory subunit 7 homolog

分子名称: 26S proteasome regulatory subunit 7 homolog / タイプ: protein_or_peptide / ID: 28 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (パン酵母)
分子量理論値: 47.318613 KDa
配列文字列: AAPYAAKLKQ TENDLKDIEA RIKEKAGVKE SDTGLAPSHL WDIMGDRQRL GEEHPLQVAR CTKIIKGNGE SDETTTDNNN SGNSNSNSN QQSTDADEDD EDAKYVINLK QIAKFVVGLG ERVSPTDIEE GMRVGVDRSK YNIELPLPPR IDPSVTMMTV E EKPDVTYS ...文字列:
AAPYAAKLKQ TENDLKDIEA RIKEKAGVKE SDTGLAPSHL WDIMGDRQRL GEEHPLQVAR CTKIIKGNGE SDETTTDNNN SGNSNSNSN QQSTDADEDD EDAKYVINLK QIAKFVVGLG ERVSPTDIEE GMRVGVDRSK YNIELPLPPR IDPSVTMMTV E EKPDVTYS DVGGCKDQIE KLREVVELPL LSPERFATLG IDPPKGILLY GPPGTGKTLC ARAVANRTDA TFIRVIGSEL VQ KYVGEGA RMVRELFEMA RTKKACIIFF DEIDAVGGAR FDDGAGGDNE VQRTMLELIT QLDGFDPRGN IKVMFATNRP NTL DPALLR PGRIDRKVEF SLPDLEGRAN IFRIHSKSMS VERGIRWELI SRLCPNSTGA ELRSVCTEAG MFAIRARRKV ATEK DFLKA VDKVISGYKK FSSTSRYMQY N

UniProtKB: 26S proteasome regulatory subunit 7 homolog

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分子 #29: 26S proteasome regulatory subunit 4 homolog

分子名称: 26S proteasome regulatory subunit 4 homolog / タイプ: protein_or_peptide / ID: 29 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (パン酵母)
分子量理論値: 43.229602 KDa
配列文字列: TRCKLKLLRM ERIKDHLLLE EEFVSNSEIL KPFEKKQEEE KKQLEEIRGN PLSIGTLEEI IDDDHAIVTS PTMPDYYVSI LSFVDKELL EPGCSVLLHH KTMSIVGVLQ DDADPMVSVM KMDKSPTESY SDIGGLESQI QEIKESVELP LTHPELYEEM G IKPPKGVI ...文字列:
TRCKLKLLRM ERIKDHLLLE EEFVSNSEIL KPFEKKQEEE KKQLEEIRGN PLSIGTLEEI IDDDHAIVTS PTMPDYYVSI LSFVDKELL EPGCSVLLHH KTMSIVGVLQ DDADPMVSVM KMDKSPTESY SDIGGLESQI QEIKESVELP LTHPELYEEM G IKPPKGVI LYGAPGTGKT LLAKAVANQT SATFLRIVGS ELIQKYLGDG PRLCRQIFKV AGENAPSIVF IDEIDAIGTK RY DSNSGGE REIQRTMLEL LNQLDGFDDR GDVKVIMATN KIETLDPALI RPGRIDRKIL FENPDLSTKK KILGIHTSKM NLS EDVNLE TLVTTKDDLS GADIQAMCTE AGLLALRERR MQVTAEDFKQ AKERVMKNKV EENLEGLYL

UniProtKB: 26S proteasome regulatory subunit 4 homolog

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分子 #30: 26S proteasome regulatory subunit 6B homolog

分子名称: 26S proteasome regulatory subunit 6B homolog / タイプ: protein_or_peptide / ID: 30 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (パン酵母)
分子量理論値: 44.353523 KDa
配列文字列: NNNSALSNVN SDIYFKLKKL EKEYELLTLQ EDYIKDEQRH LKRELKRAQE EVKRIQSVPL VIGQFLEPID QNTGIVSSTT GMSYVVRIL STLDRELLKP SMSVALHRHS NALVDILPPD SDSSISVMGE NEKPDVTYAD VGGLDMQKQE IREAVELPLV Q ADLYEQIG ...文字列:
NNNSALSNVN SDIYFKLKKL EKEYELLTLQ EDYIKDEQRH LKRELKRAQE EVKRIQSVPL VIGQFLEPID QNTGIVSSTT GMSYVVRIL STLDRELLKP SMSVALHRHS NALVDILPPD SDSSISVMGE NEKPDVTYAD VGGLDMQKQE IREAVELPLV Q ADLYEQIG IDPPRGVLLY GPPGTGKTML VKAVANSTKA AFIRVNGSEF VHKYLGEGPR MVRDVFRLAR ENAPSIIFID EV DSIATKR FDAQTGSDRE VQRILIELLT QMDGFDQSTN VKVIMATNRA DTLDPALLRP GRLDRKIEFP SLRDRRERRL IFG TIASKM SLAPEADLDS LIIRNDSLSG AVIAAIMQEA GLRAVRKNRY VILQSDLEEA YATQVKTDNT VDKFDFYK

UniProtKB: 26S proteasome regulatory subunit 6B homolog

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分子 #31: 26S proteasome subunit RPT4

分子名称: 26S proteasome subunit RPT4 / タイプ: protein_or_peptide / ID: 31 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (パン酵母)
分子量理論値: 43.931473 KDa
配列文字列: EQEAHNKALN QFKRKLLEHR RYDDQLKQRR QNIRDLEKLY DKTENDIKAL QSIGQLIGEV MKELSEEKYI VKASSGPRYI VGVRNSVDR SKLKKGVRVT LDITTLTIMR ILPRETDPLV YNMTSFEQGE ITFDGIGGLT EQIRELREVI ELPLKNPEIF Q RVGIKPPK ...文字列:
EQEAHNKALN QFKRKLLEHR RYDDQLKQRR QNIRDLEKLY DKTENDIKAL QSIGQLIGEV MKELSEEKYI VKASSGPRYI VGVRNSVDR SKLKKGVRVT LDITTLTIMR ILPRETDPLV YNMTSFEQGE ITFDGIGGLT EQIRELREVI ELPLKNPEIF Q RVGIKPPK GVLLYGPPGT GKTLLAKAVA ATIGANFIFS PASGIVDKYI GESARIIREM FAYAKEHEPC IIFMDEVDAI GG RRFSEGT SADREIQRTL MELLTQMDGF DNLGQTKIIM ATNRPDTLDP ALLRPGRLDR KVEIPLPNEA GRLEIFKIHT AKV KKTGEF DFEAAVKMSD GFNGADIRNC ATEAGFFAIR DDRDHINPDD LMKAVRKVAE VKKLEGTIEY QK

UniProtKB: 26S proteasome subunit RPT4

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分子 #32: 26S proteasome regulatory subunit 6A

分子名称: 26S proteasome regulatory subunit 6A / タイプ: protein_or_peptide / ID: 32 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (パン酵母)
分子量理論値: 46.902141 KDa
配列文字列: GDDELDQEIL NLSTQELQTR AKLLDNEIRI FRSELQRLSH ENNVMLEKIK DNKEKIKNNR QLPYLVANVV EVMDMNEIED KENSESTTQ GGNVNLDNTA VGKAAVVKTS SRQTVFLPMV GLVDPDKLKP NDLVGVNKDS YLILDTLPSE FDSRVKAMEV D EKPTETYS ...文字列:
GDDELDQEIL NLSTQELQTR AKLLDNEIRI FRSELQRLSH ENNVMLEKIK DNKEKIKNNR QLPYLVANVV EVMDMNEIED KENSESTTQ GGNVNLDNTA VGKAAVVKTS SRQTVFLPMV GLVDPDKLKP NDLVGVNKDS YLILDTLPSE FDSRVKAMEV D EKPTETYS DVGGLDKQIE ELVEAIVLPM KRADKFKDMG IRAPKGALMY GPPGTGKTLL ARACAAQTNA TFLKLAAPQL VQ MYIGEGA KLVRDAFALA KEKAPTIIFI DELDAIGTKR FDSEKSGDRE VQRTMLELLN QLDGFSSDDR VKVLAATNRV DVL DPALLR SGRLDRKIEF PLPSEDSRAQ ILQIHSRKMT TDDDINWQEL ARSTDEFNGA QLKAVTVEAG MIALRNGQSS VKHE DFVEG ISEVQARKSK SVSFYA

UniProtKB: 26S proteasome regulatory subunit 6A

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分子 #33: 26S proteasome regulatory subunit 8 homolog

分子名称: 26S proteasome regulatory subunit 8 homolog / タイプ: protein_or_peptide / ID: 33 / コピー数: 1 / 光学異性体: LEVO
由来(天然)生物種: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (パン酵母)
分子量理論値: 45.342742 KDa
配列文字列: MTAAVTSSNI VLETHESGIK PYFEQKIQET ELKIRSKTEN VRRLEAQRNA LNDKVRFIKD ELRLLQEPGS YVGEVIKIVS DKKVLVKVQ PEGKYIVDVA KDINVKDLKA SQRVCLRSDS YMLHKVLENK ADPLVSLMMV EKVPDSTYDM VGGLTKQIKE I KEVIELPV ...文字列:
MTAAVTSSNI VLETHESGIK PYFEQKIQET ELKIRSKTEN VRRLEAQRNA LNDKVRFIKD ELRLLQEPGS YVGEVIKIVS DKKVLVKVQ PEGKYIVDVA KDINVKDLKA SQRVCLRSDS YMLHKVLENK ADPLVSLMMV EKVPDSTYDM VGGLTKQIKE I KEVIELPV KHPELFESLG IAQPKGVILY GPPGTGKTLL ARAVAHHTDC KFIRVSGAEL VQKYIGEGSR MVRELFVMAR EH APSIIFM DEIDSIGSTR VEGSGGGDSE VQRTMLELLN QLDGFETSKN IKIIMATNRL DILDPALLRP GRIDRKIEFP PPS VAARAE ILRIHSRKMN LTRGINLRKV AEKMNGCSGA DVKGVCTEAG MYALRERRIH VTQEDFELAV GKVMNKNQET AISV AKLFK

UniProtKB: 26S proteasome regulatory subunit 8 homolog

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分子 #34: ADENOSINE-5'-TRIPHOSPHATE

分子名称: ADENOSINE-5'-TRIPHOSPHATE / タイプ: ligand / ID: 34 / コピー数: 4 / 式: ATP
分子量理論値: 507.181 Da
Chemical component information

ChemComp-ATP:
ADENOSINE-5'-TRIPHOSPHATE / ATP / ATP, エネルギー貯蔵分子*YM

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分子 #35: MAGNESIUM ION

分子名称: MAGNESIUM ION / タイプ: ligand / ID: 35 / コピー数: 6 / 式: MG
分子量理論値: 24.305 Da

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分子 #36: ADENOSINE-5'-DIPHOSPHATE

分子名称: ADENOSINE-5'-DIPHOSPHATE / タイプ: ligand / ID: 36 / コピー数: 2 / 式: ADP
分子量理論値: 427.201 Da
Chemical component information

ChemComp-ADP:
ADENOSINE-5'-DIPHOSPHATE / ADP / ADP, エネルギー貯蔵分子*YM

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実験情報

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構造解析

手法クライオ電子顕微鏡法
解析単粒子再構成法
試料の集合状態particle

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試料調製

緩衝液pH: 7.4
凍結凍結剤: ETHANE-PROPANE

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電子顕微鏡法

顕微鏡FEI TITAN KRIOS
撮影フィルム・検出器のモデル: GATAN K2 SUMMIT (4k x 4k)
平均電子線量: 35.0 e/Å2
電子線加速電圧: 300 kV / 電子線源: FIELD EMISSION GUN
電子光学系照射モード: FLOOD BEAM / 撮影モード: BRIGHT FIELD
実験機器
モデル: Titan Krios / 画像提供: FEI Company

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画像解析

初期モデルモデルのタイプ: PDB ENTRY
PDBモデル - PDB ID:

4cr2

最終 再構成解像度のタイプ: BY AUTHOR / 解像度: 6.1 Å / 解像度の算出法: FSC 0.143 CUT-OFF / 使用した粒子像数: 184988
初期 角度割当タイプ: PROJECTION MATCHING
最終 角度割当タイプ: PROJECTION MATCHING

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万見について

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お知らせ

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2022年2月9日: EMDBエントリの付随情報ファイルのフォーマットが新しくなりました

EMDBエントリの付随情報ファイルのフォーマットが新しくなりました

  • EMDBのヘッダファイルのバージョン3が、公式のフォーマットとなりました。
  • これまでは公式だったバージョン1.9は、アーカイブから削除されます。

関連情報:EMDBヘッダ

外部リンク:wwPDBはEMDBデータモデルのバージョン3へ移行します

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2020年8月12日: 新型コロナ情報

新型コロナ情報

URL: https://pdbj.org/emnavi/covid19.php

新ページ: EM Navigatorに新型コロナウイルスの特設ページを開設しました。

関連情報:Covid-19情報 / 2020年3月5日: 新型コロナウイルスの構造データ

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2020年3月5日: 新型コロナウイルスの構造データ

新型コロナウイルスの構造データ

関連情報:万見生物種 / 2020年8月12日: 新型コロナ情報

外部リンク:COVID-19特集ページ - PDBj / 今月の分子2020年2月：コロナウイルスプロテーアーゼ

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2019年1月31日: EMDBのIDの桁数の変更

EMDBのIDの桁数の変更

  • EMDBエントリに付与されているアクセスコード(EMDB-ID)は4桁の数字(例、EMD-1234)でしたが、間もなく枯渇します。これまでの4桁のID番号は4桁のまま変更されませんが、4桁の数字を使い切った後に発行されるIDは5桁以上の数字(例、EMD-12345)になります。5桁のIDは2019年の春頃から発行される見通しです。
  • EM Navigator/万見では、接頭語「EMD-」は省略されています。

関連情報:Q: 「EMD」とは何ですか？ / 万見/EM NavigatorにおけるID/アクセスコードの表記

外部リンク:EMDB Accession Codes are Changing Soon! / PDBjへお問い合わせ

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2017年7月12日: PDB大規模アップデート

PDB大規模アップデート

  • 新バージョンのPDBx/mmCIF辞書形式に基づくデータがリリースされました。
  • 今回の更新はバージョン番号が4から5になる大規模なもので、全エントリデータの書き換えが行われる「Remediation」というアップデートに該当します。
  • このバージョンアップで、電子顕微鏡の実験手法に関する多くの項目の書式が改定されました(例：em_softwareなど)。
  • EM NavigatorとYorodumiでも、この改定に基づいた表示内容になります。

外部リンク:wwPDB Remediation / OneDepデータ基準に準拠した、より強化された内容のモデル構造ファイルが、PDBアーカイブで公開されました。

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万見 (Yorodumi)

幾万の構造データを、幾万の視点から

  • 万見(Yorodumi)は、EMDB/PDB/SASBDBなどの構造データを閲覧するためのページです。
  • EM Navigatorの詳細ページの後継、Omokage検索のフロントエンドも兼ねています。

関連情報:EMDB / PDB / SASBDB / 3つのデータバンクの比較 / 万見検索 / 2016年8月31日: 新しいEM Navigatorと万見 / 万見文献 / Jmol/JSmol / 機能・相同性情報 / 新しいEM Navigatorと万見の変更点

他の情報も見る