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Open data
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Basic information
Entry | ![]() | |||||||||||||||
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Title | Ewald sphere-corrected Melbournevirus particle | |||||||||||||||
![]() | Whole Melbournevirus reconstruction | |||||||||||||||
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Biological species | ![]() | |||||||||||||||
Method | single particle reconstruction / cryo EM / Resolution: 4.91 Å | |||||||||||||||
![]() | Burton-Smith RN / Murata K | |||||||||||||||
Funding support | ![]() ![]()
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![]() | ![]() Title: The 4.4A structure of the giant Melbournevirus virion belonging to the Marseilleviridae family Authors: Burton-Smith RN / Reddy HKN / Svenda M / Abergel C / Okamoto K / Murata K | |||||||||||||||
History |
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Structure visualization
Supplemental images |
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Downloads & links
-EMDB archive
Map data | ![]() | 10 GB | ![]() | |
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Header (meta data) | ![]() ![]() | 9.7 KB 9.7 KB | Display Display | ![]() |
FSC (resolution estimation) | ![]() | 50.3 KB | Display | ![]() |
Images | ![]() | 174.2 KB | ||
Others | ![]() | 1.1 GB | ||
Archive directory | ![]() ![]() | HTTPS FTP |
-Validation report
Summary document | ![]() | 573.9 KB | Display | ![]() |
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Full document | ![]() | 573.4 KB | Display | |
Data in XML | ![]() | 31.2 KB | Display | |
Data in CIF | ![]() | 46 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
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Links
EMDB pages | ![]() ![]() |
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Map
File | ![]() | ||||||||||||||||||||
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Annotation | Whole Melbournevirus reconstruction | ||||||||||||||||||||
Voxel size | X=Y=Z: 2.21 Å | ||||||||||||||||||||
Density |
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Symmetry | Space group: 1 | ||||||||||||||||||||
Details | EMDB XML:
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-Supplemental data
-Additional map: Whole Melbournevirus reconstruction, capsid masked for easier visualisation...
File | emd_31528_additional_1.map | ||||||||||||
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Annotation | Whole Melbournevirus reconstruction, capsid masked for easier visualisation of capsid | ||||||||||||
Projections & Slices |
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Density Histograms |
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Sample components
-Entire : Melbournevirus
Entire | Name: ![]() |
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Components |
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-Supramolecule #1: Melbournevirus
Supramolecule | Name: Melbournevirus / type: virus / ID: 1 / Parent: 0 / NCBI-ID: 1560514 / Sci species name: Melbournevirus / Virus type: VIRION / Virus isolate: STRAIN / Virus enveloped: No / Virus empty: No |
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-Experimental details
-Structure determination
Method | cryo EM |
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![]() | single particle reconstruction |
Aggregation state | particle |
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Sample preparation
Buffer | pH: 7.4 |
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Vitrification | Cryogen name: ETHANE |
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Electron microscopy
Microscope | FEI TITAN KRIOS |
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Image recording | Film or detector model: GATAN K2 SUMMIT (4k x 4k) / Detector mode: COUNTING / Average electron dose: 26.4 e/Å2 |
Electron beam | Acceleration voltage: 300 kV / Electron source: ![]() |
Electron optics | Illumination mode: FLOOD BEAM / Imaging mode: BRIGHT FIELD |
Experimental equipment | ![]() Model: Titan Krios / Image courtesy: FEI Company |