[English] 日本語
Yorodumi
- EMDB-17956: Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/N... -

+
Open data


ID or keywords:

Loading...

-
Basic information

Entry
Database: EMDB / ID: EMD-17956
TitleChaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure
Map dataChaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - composite structure
Sample
  • Complex: Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure
    • Complex: Ribosome
      • RNA: x 4 types
      • Protein or peptide: x 53 types
    • Complex: Ribosome assembly protein 4
      • Protein or peptide: x 1 types
  • Ligand: x 4 types
Keywordsbiogenesis / pre-60S / 5S RNP / RIBOSOME
Function / homology
Function and homology information


dolichyl-diphosphooligosaccharide-protein glycotransferase / dolichyl-diphosphooligosaccharide-protein glycotransferase activity / maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / ribosomal large subunit binding / protein glycosylation / preribosome, large subunit precursor / protein-RNA complex assembly / ribonucleoprotein complex binding / ribosomal subunit export from nucleus / maturation of LSU-rRNA ...dolichyl-diphosphooligosaccharide-protein glycotransferase / dolichyl-diphosphooligosaccharide-protein glycotransferase activity / maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / ribosomal large subunit binding / protein glycosylation / preribosome, large subunit precursor / protein-RNA complex assembly / ribonucleoprotein complex binding / ribosomal subunit export from nucleus / maturation of LSU-rRNA / translation initiation factor activity / maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / ribosomal large subunit biogenesis / cytosolic ribosome assembly / rRNA processing / large ribosomal subunit / ribosome biogenesis / 5S rRNA binding / large ribosomal subunit rRNA binding / ribosomal large subunit assembly / cytoplasmic translation / cytosolic large ribosomal subunit / nucleic acid binding / negative regulation of translation / rRNA binding / ribosome / structural constituent of ribosome / ribonucleoprotein complex / translation / mRNA binding / GTP binding / nucleolus / RNA binding / zinc ion binding / nucleoplasm / membrane / nucleus / metal ion binding / cytosol / cytoplasm
Similarity search - Function
Gcn1, N-terminal / Generalcontrol nonderepressible 1 (Gcn1) N-terminal / Centromere-binding protein ParB, C-terminal / Centromere-binding protein ParB C-terminal / E-Z type HEAT repeats / PBS lyase HEAT-like repeat / Centrosomal protein CEP104-like, TOG domain / Ribosome biogenesis protein Rpf2 / : / STT3/PglB/AglB core domain ...Gcn1, N-terminal / Generalcontrol nonderepressible 1 (Gcn1) N-terminal / Centromere-binding protein ParB, C-terminal / Centromere-binding protein ParB C-terminal / E-Z type HEAT repeats / PBS lyase HEAT-like repeat / Centrosomal protein CEP104-like, TOG domain / Ribosome biogenesis protein Rpf2 / : / STT3/PglB/AglB core domain / Ribosome biogenesis protein Nop53/GLTSCR2 / Nop53 (60S ribosomal biogenesis) / Cgr1-like / Cgr1 family / Parkin co-regulated protein / Parkin co-regulated protein / Ribosomal biogenesis regulatory protein / Ribosome biogenesis regulatory protein (RRS1) / TOG domain / TOG / : / : / Oligosaccharyl transferase, STT3 subunit / Oligosaccharyl transferase STT3, N-terminal / Nucleolar GTP-binding protein 2, N-terminal domain / Nucleolar GTP-binding protein 2 / NGP1NT (NUC091) domain / Domain of unknown function DUF2423 / YBL028C ribosome biogenesis factor, N-terminal domain / Guanine nucleotide-binding protein-like 3, N-terminal domain / GNL3L/Grn1 putative GTPase / HEAT-like repeat / Zinc-finger double-stranded RNA-binding / Zinc finger, double-stranded RNA binding / : / Pescadillo / Pescadillo N-terminus / GTP-binding protein, orthogonal bundle domain superfamily / Ribosomal biogenesis NSA2 family / Ribosome assembly factor Mrt4 / : / HEAT repeat profile. / HEAT, type 2 / NOG, C-terminal / Nucleolar GTP-binding protein 1 / NOGCT (NUC087) domain / Nucleolar GTP-binding protein 1, Rossman-fold domain / NOG1, N-terminal helical domain / Nucleolar GTP-binding protein 1 (NOG1) / NOG1 N-terminal helical domain / Brix domain / Brix domain / Brix domain profile. / Brix / Circularly permuted (CP)-type guanine nucleotide-binding (G) domain / Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. / Matrin/U1-C-like, C2H2-type zinc finger / U1-like zinc finger / OBG-type guanine nucleotide-binding (G) domain / OBG-type guanine nucleotide-binding (G) domain profile. / Translation initiation factor IF6 / eIF-6 family / translation initiation factor 6 / 50S ribosome-binding GTPase / Ribosomal protein L30e / GTP binding domain / BRCA1 C Terminus (BRCT) domain / Ribosomal protein L28e / 50S ribosomal protein L10, insertion domain superfamily / Ribosomal protein L18/L18-A/B/e, conserved site / Ribosomal protein L18e signature. / : / Ribosomal L28e/Mak16 / Ribosomal L28e protein family / 60S ribosomal protein L10P, insertion domain / Insertion domain in 60S ribosomal protein L10P / Ribosomal protein L18e / Ribosomal protein 60S L18 and 50S L18e / metallochaperone-like domain / TRASH domain / Ribosomal protein L13e, conserved site / Ribosomal protein L13e signature. / Ribosomal protein L22e / Ribosomal protein L22e superfamily / Ribosomal L22e protein family / Ribosomal protein L38e / Ribosomal protein L38e superfamily / Ribosomal L38e protein family / Ribosomal protein L27e, conserved site / Ribosomal protein L27e signature. / Ribosomal protein L13e / Ribosomal protein L13e / Ribosomal protein L19, eukaryotic / 60S ribosomal protein L18a/ L20, eukaryotes / Ribosomal protein L19/L19e conserved site / Ribosomal protein L19e signature. / Ribosomal protein L34e, conserved site / Ribosomal protein L34e signature. / Ribosomal protein L1, 3-layer alpha/beta-sandwich / Ribosomal protein L5 eukaryotic, C-terminal
Similarity search - Domain/homology
60S ribosomal protein L3-like protein / 60S ribosomal protein L26-like protein / Ribosomal protein L15 / 60S ribosomal protein L27 / Ribosome biogenesis protein NSA2 homolog / 60S ribosomal protein L6 / dolichyl-diphosphooligosaccharide--protein glycotransferase / 60S ribosomal protein l21-like protein / Ribosomal protein L37 / Putative RNA-binding protein ...60S ribosomal protein L3-like protein / 60S ribosomal protein L26-like protein / Ribosomal protein L15 / 60S ribosomal protein L27 / Ribosome biogenesis protein NSA2 homolog / 60S ribosomal protein L6 / dolichyl-diphosphooligosaccharide--protein glycotransferase / 60S ribosomal protein l21-like protein / Ribosomal protein L37 / Putative RNA-binding protein / Putative plasmid related protein / Ribosome biogenesis protein NOP53 / Ribosome biogenesis protein RLP24 / 60S ribosomal protein L2-like protein / 60S ribosomal protein L25-like protein / Large ribosomal subunit protein uL10 / Eukaryotic translation initiation factor 6 / 60S ribosomal protein L43-like protein / 60S ribosomal protein L32-like protein / Uncharacterized protein / Nucleolar GTP-binding protein 1 / 60S ribosomal protein L13 / Ribosomal protein L18-like protein / Ribosomal protein L19 / 60S ribosomal protein L8 / Zinc finger domain-containing protein / 60S ribosomal protein L36 / Nucleolar GTP-binding protein 2 / Ribosome assembly protein 4 / 60S ribosomal protein L20 / Ribosome biogenesis regulatory protein / 60S ribosomal protein l33-like protein / rRNA-processing protein / Putative 60S ribosomal protein / 60S ribosomal protein L22-like protein / 60S ribosomal protein l5-like protein / 60S ribosomal protein l30-like protein / Putative GTP binding protein / Ribosome production factor 2 homolog / 60S ribosomal protein L4-like protein / 60S ribosomal protein l7-like protein / Ribosomal protein l34-like protein / 60S ribosomal protein L38-like protein / 60S ribosomal protein L12-like protein / 60S ribosomal protein l17-like protein / 60S ribosomal protein L16-like protein / Large ribosomal subunit protein eL28 / DUF2423 domain-containing protein / Putative ribosomal protein / Pescadillo homolog / 60S ribosomal protein l23-like protein / Large ribosomal subunit protein eL39
Similarity search - Component
Biological speciesThermochaetoides thermophila DSM 1495 (fungus)
Methodsingle particle reconstruction / cryo EM / Resolution: 2.12 Å
AuthorsThoms M / Cheng J / Denk T / Berninghausen O / Beckmann R
Funding supportEuropean Union, Germany, 3 items
OrganizationGrant numberCountry
European Research Council (ERC)741781European Union
European Research Council (ERC)885711European Union
German Research Foundation (DFG)HU363/12-2 Germany
CitationJournal: EMBO Rep / Year: 2023
Title: Structural insights into coordinating 5S RNP rotation with ITS2 pre-RNA processing during ribosome formation.
Authors: Matthias Thoms / Benjamin Lau / Jingdong Cheng / Lisa Fromm / Timo Denk / Nikola Kellner / Dirk Flemming / Paulina Fischer / Laurent Falquet / Otto Berninghausen / Roland Beckmann / Ed Hurt /
Abstract: The rixosome defined in Schizosaccharomyces pombe and humans performs diverse roles in pre-ribosomal RNA processing and gene silencing. Here, we isolate and describe the conserved rixosome from ...The rixosome defined in Schizosaccharomyces pombe and humans performs diverse roles in pre-ribosomal RNA processing and gene silencing. Here, we isolate and describe the conserved rixosome from Chaetomium thermophilum, which consists of two sub-modules, the sphere-like Rix1-Ipi3-Ipi1 and the butterfly-like Las1-Grc3 complex, connected by a flexible linker. The Rix1 complex of the rixosome utilizes Sda1 as landing platform on nucleoplasmic pre-60S particles to wedge between the 5S rRNA tip and L1-stalk, thereby facilitating the 180° rotation of the immature 5S RNP towards its mature conformation. Upon rixosome positioning, the other sub-module with Las1 endonuclease and Grc3 polynucleotide-kinase can reach a strategic position at the pre-60S foot to cleave and 5' phosphorylate the nearby ITS2 pre-rRNA. Finally, inward movement of the L1 stalk permits the flexible Nop53 N-terminus with its AIM motif to become positioned at the base of the L1-stalk to facilitate Mtr4 helicase-exosome participation for completing ITS2 removal. Thus, the rixosome structure elucidates the coordination of two central ribosome biogenesis events, but its role in gene silencing may adapt similar strategies.
History
DepositionJul 17, 2023-
Header (metadata) releaseNov 15, 2023-
Map releaseNov 15, 2023-
UpdateDec 20, 2023-
Current statusDec 20, 2023Processing site: PDBe / Status: Released

-
Structure visualization

Supplemental images

emd_17956.png

Downloads & links

-
Map

FileDownload / File: emd_17956.map.gz / Format: CCP4 / Size: 476.8 MB / Type: IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)
AnnotationChaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - composite structure
Projections & slices

Image control

Size
Brightness
Contrast
Others
AxesZ (Sec.)Y (Row.)X (Col.)
1.05 Å/pix.
x 500 pix.
= 522.5 Å		1.05 Å/pix.
x 500 pix.
= 522.5 Å		1.05 Å/pix.
x 500 pix.
= 522.5 Å

Surface

Projections

Slices (1/3)

Slices (1/2)

Slices (2/3)

Images are generated by Spider.

Voxel sizeX=Y=Z: 1.045 Å
Density

Histogram

Histogram (log scale)
Contour LevelBy AUTHOR: 0.55
Minimum - Maximum0.0 - 10.767567
Average (Standard dev.)0.018722301 (±0.17502941)
SymmetrySpace group: 1
Details

EMDB XML:

Map geometry
Axis orderXYZ
Origin000
Dimensions500500500
Spacing500500500
CellA=B=C: 522.5 Å
α=β=γ: 90.0 °

-
Supplemental data

-
Sample components

+
Entire : Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/N...

EntireName: Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure
Components
  • Complex: Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure
    • Complex: Ribosome
      • RNA: 26S rRNA
      • RNA: 5.8S rRNA
      • RNA: ITS2
      • RNA: 5S rRNA
      • Protein or peptide: Utp30
      • Protein or peptide: Large ribosomal subunit protein uL10
      • Protein or peptide: Nucleolar GTP-binding protein 1
      • Protein or peptide: Putative RNA-binding protein
      • Protein or peptide: Pescadillo homolog
      • Protein or peptide: Ribosome biogenesis protein NSA2 homolog
      • Protein or peptide: Putative GTP binding protein
      • Protein or peptide: 60S ribosomal protein l7-like protein
      • Protein or peptide: Eukaryotic translation initiation factor 6
      • Protein or peptide: DUF2423 domain-containing protein
      • Protein or peptide: Ribosome biogenesis protein RLP24
      • Protein or peptide: Putative 60S ribosomal protein
      • Protein or peptide: Zinc finger domain-containing protein
      • Protein or peptide: Nucleolar GTP-binding protein 2
      • Protein or peptide: Ribosome biogenesis protein NOP53
      • Protein or peptide: Ribosome production factor 2 homolog
      • Protein or peptide: Ribosome biogenesis regulatory protein
      • Protein or peptide: rRNA-processing protein
      • Protein or peptide: 60S ribosomal protein L2-like protein
      • Protein or peptide: 60S ribosomal protein L3-like protein
      • Protein or peptide: 60S ribosomal protein L4-like protein
      • Protein or peptide: 60S ribosomal protein l5-like protein
      • Protein or peptide: 60S ribosomal protein L6
      • Protein or peptide: 60S ribosomal protein L8
      • Protein or peptide: 60S ribosomal protein l9-like protein
      • Protein or peptide: Putative ribosomal protein
      • Protein or peptide: 60S ribosomal protein L12-like protein
      • Protein or peptide: 60S ribosomal protein L13
      • Protein or peptide: 60S ribosomal protein L14-like protein
      • Protein or peptide: Ribosomal protein L15
      • Protein or peptide: 60S ribosomal protein L16-like protein
      • Protein or peptide: 60S ribosomal protein l17-like protein
      • Protein or peptide: Ribosomal protein L18-like protein
      • Protein or peptide: Ribosomal protein L19
      • Protein or peptide: 60S ribosomal protein L20
      • Protein or peptide: 60S ribosomal protein l21-like protein
      • Protein or peptide: 60S ribosomal protein L22-like protein
      • Protein or peptide: 60S ribosomal protein l23-like protein
      • Protein or peptide: 60S ribosomal protein L25-like protein
      • Protein or peptide: 60S ribosomal protein L26-like protein
      • Protein or peptide: 60S ribosomal protein L27
      • Protein or peptide: 60S ribosomal protein L28-like protein
      • Protein or peptide: 60S ribosomal protein l30-like protein
      • Protein or peptide: Putative 60S ribosomal protein
      • Protein or peptide: 60S ribosomal protein L32-like protein
      • Protein or peptide: 60S ribosomal protein l33-like protein
      • Protein or peptide: Ribosomal protein l34-like protein
      • Protein or peptide: dolichyl-diphosphooligosaccharide--protein glycotransferase
      • Protein or peptide: 60S ribosomal protein L36
      • Protein or peptide: Ribosomal protein L37
      • Protein or peptide: 60S ribosomal protein L38-like protein
      • Protein or peptide: Ribosomal protein eL39
      • Protein or peptide: 60S ribosomal protein L43-like protein
    • Complex: Ribosome assembly protein 4
      • Protein or peptide: Ribosome assembly protein 4
  • Ligand: GUANOSINE-5'-TRIPHOSPHATE
  • Ligand: MAGNESIUM ION
  • Ligand: ZINC ION
  • Ligand: water

+
Supramolecule #1: Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/N...

SupramoleculeName: Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure
type: complex / ID: 1 / Parent: 0 / Macromolecule list: #1-#58

+
Supramolecule #2: Ribosome

SupramoleculeName: Ribosome / type: complex / ID: 2 / Parent: 1 / Macromolecule list: #1-#21, #23-#58
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)

+
Supramolecule #3: Ribosome assembly protein 4

SupramoleculeName: Ribosome assembly protein 4 / type: complex / ID: 3 / Parent: 1 / Macromolecule list: #22
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)

+
Macromolecule #1: 26S rRNA

MacromoleculeName: 26S rRNA / type: rna / ID: 1 / Number of copies: 1
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 1.080783125 MDa
SequenceString: AGGUUGACCU CGGAUCAGGU AGGAGGACCC GCUGAACUUA AGCAUAUCAA UAAGCGGAGG AAAAGAAACC AACAGGGAUU GCCCUAGUA ACGGCGAGUG AAGCGGCAAC AGCUCAAAUU UGAAAGCUGG CUUCGGCCCG CGUUGUAAUU UGGAGAGGAU G CUUUGGGC ...String:
AGGUUGACCU CGGAUCAGGU AGGAGGACCC GCUGAACUUA AGCAUAUCAA UAAGCGGAGG AAAAGAAACC AACAGGGAUU GCCCUAGUA ACGGCGAGUG AAGCGGCAAC AGCUCAAAUU UGAAAGCUGG CUUCGGCCCG CGUUGUAAUU UGGAGAGGAU G CUUUGGGC GAGGCUCCUU CUGAGUUCCC UGGAACGGGA CGCCACAGAG GGUGAGAGCC CCGUAUAGUU GGAAGCCAAG CC UGUGUAA AGCUCCUUCG ACGAGUCGAG UAGUUUGGGA AUGCUGCUCA AAAUGGGAGG UAAAUUUCUU CUAAAGCUAA AUA CCGGCC AGAGACCGAU AGCGCACAAG UAGAGUGAUC GAAAGAUGAA AAGCACUUUG AAAAGAGG(OMG)U UA(A2M)AUA GCA CGUGAAAUUG UUGAAAGGGA AGCGCUUGUG ACCAGACUUG CGCCCGGCGG AUCAUCCGGU GUUCUCACCG GUGCACU CC GCCGGGCUCA GGCCAGCAUC GGUUCUGGCG GGGGGAUAAA GGCCCAGGGA AUGUGGCUCC UCCGGGAGUG UUAUAGCC C UGGGUGUAAU ACCCUCGCCG GGACCGAGGA CCGCGCUCUG CAAGGAUGCU GGCGUAAUGG UCACCAGCGA CCC(OMG)U CUUG AAAC(A2M)CGGAC CAA(OMG)GAGUCA AGGUUUUGCG CGAGUGUUUG GGUGUAAAAC CCGCACGCGU AAUGAAAG U GAACGUAGGU GAGAGCUUCG GCGCAUCAUC GACCGAUCCU GAUGUAUUCG GAUGGAUUUG AGUAGGAGCG UUAAGC (OMC)UU GGACCC(OMG)AAA GAUGGUGAAC UAUGCUUGGA UAGGGUGAAG CCAGAGGAAA CUCUGGUGGA GGCUCGC (A2M)G CGGUUCUG(A2M)C GUGCAAAUCG AUCGUCAAAU CUGAGCAUGG GGGCGAAAGA CUAAUCGAAC CAUCUAGUAG CUGGUUACC GCCGAAGUUU CCCUCAGGAU AGCAGUGUCG ACCUUCAGUU UUAUGAGGUA AAGCGAAUGA UUAGGGACUC G GGGGCGAU UUUUAGCCUU CAUCCAUUCU CAAACUUUAA AUAUGUAAGA AGCCCUUGUU ACUUAACUGA ACGUGGGCAU UC GAAUGUA UCGACACUAG UGGGCCAUUU UUGGUAAGCA GAACUGGCGA UGCGGGAUGA ACCGAACGCG GGGUUAAGGU GCC GGAGUG GACGCUCAUC AGACACCACA AAAGGCGUUA GUACAUCUUG ACAGCAGGAC GGUGGCC(A2M)UG GAAGUCGGAA UCCGCUAAG GACUGUGUAA CAACUCACCU GCCGAAUGUA CUAGCCCUGA AAAUGGAUGG CGCUCAAGCG UCCCACCCAU A CCCCGCCC UCAGGGUAGA AACGAUGCCC UGAGGAGUAG GCGGCCGUGG AGGUCAGUGA CGAAGCCUAG GGCGUGAGCC CG GGUCGAA CGGCCUCUAG UGCAGAU(OMC)UU GGUGGUAGU(A2M) (OMG)CAAAUACUU CAAUGAGAAC UUGAAGGACC G AAGUGGGG AAAGGUUCCA UGUGAACAG(OMC) GGUUGGACAU GGGUUAGUCG AUCCUAAGCC AUAGGGAAGU UCCGUUUC A AAGGGGCACU CGUGCCCCGU GUGGCGAAAG GGAAGCCGGU UAAUAUUCCG GCACCUGGAU GUGGGUUUUG CGCGGCAAC GCAACUGAAC GCGGAGACGA CGGCGGGGGC CCCGGGCAGA GUUCUCUUUU CUUCUUAACG GUCUAUCACC CUGGAAACAG UUUGUCUGG AGAUAGGGUU UAAUGGCCGG AAGAGCCCGA CACUUCUGUC GGGUCCGGUG CGCUCUCGAC GUCCCUUGAA A AUCCGCGG GAGGGAAUAA UUCUCACGCC AGGU(OMC)GUACU CAUAACCGCA GCAGGUCC(OMC)C AAGGUGAAC(A2M) GCCUCUGGU UGAUAGAACA A(OMU)GUAGAUAA GGGAAGUCGG CAAAAUAGAU CCGUAACUUC GGGAAAAGGA (OMU)UG GCUCUA AGGGUUGGGC ACGUUGGGCU UUGGGCGGAC GCCCUGGGAG CAGAGGGCCU CUAGCCGGGC AACCGGCCGG CGGC CCUCA GCACCCGGGG UUGAAGCCCU UAGCAGGCUU CGGCCGUCCG GCGUGCGGUU AACAACCAAC UUAGAACUGG UACGG ACAG GGGGAAUCUG ACUGUCUAAU UAAAACAUAG CAUUGCGAUG GCCAGAAAGU GGUGUUGACG CAAUGUGAUU UCUGCC CAG UGCUCUGAAU GUCAAAGUGA AGAAAUUCAA CCAAGCGCGG GUAAACGGCG GGAGUAACUA UGACUCUCUU AAGGUAG CC AAAUGCCUCG UCAUCUAAUU AGUGACGCGC AUGAA(OMU)GGAU UAACGAG(A2M)UU CCCACUGU(OMC)C CUAUCU ACU AUCUAGCGAA ACCACAGCCA AGGGAACGGG CUUGGCAAAA UCAGCGG(OMG)GA AAGAAGACCC UGUUGAGCU (OMU)GAC(OMU)CUAGU UUGACAUUGU GAAAAGACAU AGGAGGUGUA GAAUAGGUGG GAGCUUCGGC GCCAGUGAAA UA CCACUAC UCCUAUUGUU UUUUUACUUA UUCAAUGAAG CGGGGCUGGA CUUGCGUCCA ACUUCUGGAG UUAAGGUCCU UCG CGGGCC GACCCGGGUU GAAGACAUUG UCAGGUGGGG AGUUUGGCUG (OMG)GGCGGCACA UCUGUUAAAC CAUAACGCAG GUGUCCUAA GGGGGGCUCA UGGAGAACAG AAAUCUCCAG UAGAACAAAA GGGUAAAAGU CCCCUUGAUU UUGAUU(OMU) UC AG(OMU)G(OMU)GAAUA CAAACCAUGA AAGUGUGGCC UAUCGAUCCU UUAGUCCCUC GAAAUUUGAG GCUAGAGGUG CCAGAAAAG UUACCACAG(OMG) GAUAACUGGC UUGUGGCGGC CAAGCGUUCA UAGCGACGUC GCUUUUUGAU CCUUCGA UG UCGG(OMC)UCUUC CUAUCAUACC GAAGCAGAAU UCGGUAAGCG UU(OMG)GAUU(OMG)UU CACCCACUAA UAGGGA ACG UGAGCUGGGU UUAGA(OMC)CGUC GUGAGACAGG UUAGUUUUAC CCUACUGAUG AACUCGUCGC AAUGGUAAUU CAG CUUAGU ACGAGAGGAA CCGCUGAUUC AGAUAAUUGG UUUUUGCGGU UGUCCGACCG GGCAGUGCCG CGAAGCUACC AUCU GCUGG AUAAUGGCUG AACGCCUCUA AGUCAGAAUC CAUGCCAGAA CGCGACGAUA CUACCCGCAC GUUGUAGACG UAUAA GAAU AGGCUCCGGC CUCGUAUCCU AGCAGGCGAU UCCUCCGCCG GCCUCGAAGU GGCCGUCGGU AAUUCGCGUA UUGCAA UUU AGACACGCGC GGGAUCAAAU CCUUUGCAGA CGACUUAGAU GUGCGAAAGG GUCCUGUAAG CAGUAGAGUA GCCUUGU UG UUACGAUCUG CUGAGGGUAA GCCCUCCUUC GCCUAGAUUU CCCAG

+
Macromolecule #2: 5.8S rRNA

MacromoleculeName: 5.8S rRNA / type: rna / ID: 2 / Number of copies: 1
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 50.147688 KDa
SequenceString:
AAACUUUCAA CAACGGAUCU CUUGGUUCUG GCAUCGAUGA AGAACGCAGC GAAAUGCGAU AAGUAAUGUG AAUUGCAGAA UUCCGUGAA UCAUCGAAUC UUUGAACGCA CAUUGCGCCC GCCGGUAUUC CGGCGGGCAU GCCUGUUCGA GCGUCAU

GENBANK: GENBANK: MT316345.1

+
Macromolecule #3: ITS2

MacromoleculeName: ITS2 / type: rna / ID: 3 / Number of copies: 1
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 52.085812 KDa
SequenceString:
UUCAACCAUC AAGCCCUGGG CUUGUGUUGG GGACCCGCGG CUGCUCGCGG GCCCUGAAAA GCAGUGGCGG GCUCGCUAGU CACACCGAG CGUAGUAGAA CUUCUAUUCG AUCUCGCUCA GGGCGUGCGG CGGGUGCCAG CCGUAAAACC CCAGCUUCUU C UA

+
Macromolecule #4: 5S rRNA

MacromoleculeName: 5S rRNA / type: rna / ID: 4 / Number of copies: 1
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 38.312738 KDa
SequenceString:
ACGUACGACC AUACCCAGUG GAAAGCACGG CAUCCCGUCC GCUCUGCCCU AGUUAAGCCA CUGAGGGCCC GGUUAGUAGU UGGGUCGGU GACGACCAGC GAAUCCCGGG UGUUGUACGU

+
Macromolecule #5: Utp30

MacromoleculeName: Utp30 / type: protein_or_peptide / ID: 5 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 43.700527 KDa
SequenceString: MAPSTAVAKK ETDAVIPVDP DQTLKACKAL LAHIKKAAAA PRPDGKQNLL ADEESTVAET PIWLTLTTKK HIHDSHRLQP GKIILPHPL NTSEEISVCL ITADPQRFYK NAVADEFPED LRAKIGRVID ISHLKAKFKA YEAQRKLFSE HDVFLADTRI I NRLPKALG ...String:
MAPSTAVAKK ETDAVIPVDP DQTLKACKAL LAHIKKAAAA PRPDGKQNLL ADEESTVAET PIWLTLTTKK HIHDSHRLQP GKIILPHPL NTSEEISVCL ITADPQRFYK NAVADEFPED LRAKIGRVID ISHLKAKFKA YEAQRKLFSE HDVFLADTRI I NRLPKALG KTFYKTTTKR PIPVVLMAQR EKVNGKRVPA PKGKKEKRDP LENANARPIP EIVAEIRKAI GAALVHLSPS TN TAIKVGY ANWEPEKLAA NIETVIRELV ERFVPQKWQN VRNFYVKGPE TAALPIYQTD ELWLDESKVV PDGQEPARAL PGK REKANI GKKRKPLEDA SQPALEETGK DERPKKKAKK TLPESNDDKL DKAIAERKEQ LKKQKAAAKK VAADI

UniProtKB: Uncharacterized protein

+
Macromolecule #6: Large ribosomal subunit protein uL10

MacromoleculeName: Large ribosomal subunit protein uL10 / type: protein_or_peptide / ID: 6 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 30.526518 KDa
SequenceString: MPKSKRARVY HLTQVNKKGR EAKERLFSNI RETIPKYQHC FVFSVDNMRN NYLKDVRHEL NDCRIFFGKT KLMARALGTT PEEEQADGL HRLTRYLTGT VGLLFTNRDP ADIESYFSNL SQVDFARAGT VAPRTVTVPP GIVYSTGGEV PPEHDVPVSH T LEPELRRL ...String:
MPKSKRARVY HLTQVNKKGR EAKERLFSNI RETIPKYQHC FVFSVDNMRN NYLKDVRHEL NDCRIFFGKT KLMARALGTT PEEEQADGL HRLTRYLTGT VGLLFTNRDP ADIESYFSNL SQVDFARAGT VAPRTVTVPP GIVYSTGGEV PPEHDVPVSH T LEPELRRL GMPVRMIKGK VCLGDEKGEA SEGYTICKEG EVLDSRQTRL LKLFSICLSE FKVSLLGYWS SASGEVTELE AG KTRPKRE GNRRQAMNGD EMDEDQSSDE DSD

UniProtKB: Large ribosomal subunit protein uL10

+
Macromolecule #7: Nucleolar GTP-binding protein 1

MacromoleculeName: Nucleolar GTP-binding protein 1 / type: protein_or_peptide / ID: 7 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 75.621508 KDa
SequenceString: MTGWKDIPPV PTAQEFIDIV LSRTQRRLPT QIRPGFKISR IRAFYTRKVK FTQETCSEKF GAIISSFPVL SDQHPFHRDL MNILYDADH FKVALGQIST AKNLIETISR DYVRLLKYAQ SLYQCKQLKR AALGRMATLI KRLKDPLIYL DQVRQHLARL P DINPTTRT ...String:
MTGWKDIPPV PTAQEFIDIV LSRTQRRLPT QIRPGFKISR IRAFYTRKVK FTQETCSEKF GAIISSFPVL SDQHPFHRDL MNILYDADH FKVALGQIST AKNLIETISR DYVRLLKYAQ SLYQCKQLKR AALGRMATLI KRLKDPLIYL DQVRQHLARL P DINPTTRT LLVAGFPNVG KSSFVRSVTR ADTPVEPYAF TTKSLFVGHL DYKYLRYQVI DTPGILDHPL EEMNTIEMQS VT ALAHLRA AVLYFMDISE QCGFSLKAQI NLFKSIKPLF ANKMVFIVLN KMDIKKFEEL DPEMQQEIND LTKSGEVEIL RAS CATQEG VQEVKNHVCE RLLVERVSQK LKAGTHSNGN IGTRLQEVMA RIHVATPMDG TTRETFIPEA VKNLKKYDKN DPNR RVLAR DIEEANGGAG VFNVDLRKDW ILENPEWKYD KIPEIFDGKN VYDYIDPDID AKLQALEEEE ERLEKEGFYD EDDDL PDEE EEEILQKAEY IREQHALIRN EAKMRKSLKN RAIIPRKAVK KPLSQLEDHL DQLGVDTEAI GLRARAQTAQ SSRGRS LVR SRGTTADPDA MDIDDGAASA KERLARSRSR ARSVAATNRL QDGVQGTTLR SKAERQAKLA QRKMNRMARQ GEADRHI HA SMPKHLFSGK RTIGKTDRR

UniProtKB: Nucleolar GTP-binding protein 1

+
Macromolecule #8: Putative RNA-binding protein

MacromoleculeName: Putative RNA-binding protein / type: protein_or_peptide / ID: 8 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 45.884414 KDa
SequenceString: MAAELRKKKS KSAVADADAA ISKKEKATKV TKATPKAEKR KAPEEASPVA IKKQKADKDA VVKKAAVAAE DKIAEKPVKS VLKKETSAK AKEAAKPKKK QEKVEEEEEE ALENADAAFG SDEESELDEQ TKALMDTLDD GEESDEDESK QVSTFKKGQD V GKIPTPKK ...String:
MAAELRKKKS KSAVADADAA ISKKEKATKV TKATPKAEKR KAPEEASPVA IKKQKADKDA VVKKAAVAAE DKIAEKPVKS VLKKETSAK AKEAAKPKKK QEKVEEEEEE ALENADAAFG SDEESELDEQ TKALMDTLDD GEESDEDESK QVSTFKKGQD V GKIPTPKK APQKQTNGDS KPAGDSQPGV MYIARLPHGF YEHELRGYFS QFGEITRLRV VRNKKTGASR HRAFIEFADA EV ADIAART MDKYLLFGHI LTCKIVPPAQ VHPDLFKGAN RRFKVVPWNK MAGRQLERPL SESQWQVKVA KEEQRRAARA EKL KEMGYE FEAPALKVPK AKPVLENGEE EKKAIETAPA PAVEEKESKE VAKRQAEEEV EEKAPAPKTK KVKEDKPAKE AATI SAPKK GKKSKKTKS

UniProtKB: Putative RNA-binding protein

+
Macromolecule #9: Pescadillo homolog

MacromoleculeName: Pescadillo homolog / type: protein_or_peptide / ID: 9 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 77.16725 KDa
SequenceString: MGKAKKKGKS GAARNYMTRT QAVKKLQLSL PDFRKLCIWK GIYPREPRDR RKVNKSATAS TTFYYTKDIQ YLLHEPLLQK FREQKALEK KISRALGRGD VSNAARLERN ANLPEKTGKP RYTLNHIIRE RYPTFQDALR DLDDCLSMLF LFANLPSTTA V PAKMIARC ...String:
MGKAKKKGKS GAARNYMTRT QAVKKLQLSL PDFRKLCIWK GIYPREPRDR RKVNKSATAS TTFYYTKDIQ YLLHEPLLQK FREQKALEK KISRALGRGD VSNAARLERN ANLPEKTGKP RYTLNHIIRE RYPTFQDALR DLDDCLSMLF LFANLPSTTA V PAKMIARC ERLCHEFQHY LIVTHSLRKS FLSIKGIYYQ ANIQGEDILW LVPYKFNQRI VGDVDFRIMG TFVEFYMTLL GF VNYRLYT SIGLKYPPKF DQVKDDQGAE LAAFSLEGLN LASQNGEQKA ITNGEEHGPD PKVQAEVDKL VAKLREEEQQ ANG DKTDEK GEENEGDDKP SDAIDKFEPV APGGDVLPQP SYSSSDPSQL FANFTFFLSR ETPRQPLEFI LRAFGCKRIG WDAV LGEGA FTTDESDPRI THQIIDRPVI RAAVSEDGDG EDNQTSQKLA PNGRYPGRIY VQPQWVWDSI NDEELKPPEL YAPGA QLPP HLSPFVKPTQ GQYDPTKPLE EQQTEAEALE AELEDAQAQQ EGSDEESGSE VENDMSVASD EEDEQEDDFG GFSDED EEQ SDEGSEEGDE EEDDDEEEEA TLERQRELEA ELAGKAVSKG KPLDPKVKAK LEAKKALERK KKQEAEELER AKGMLSK KK RKLFEQMQYS NAKKNAEDAK LRAKRRRIEK EMAAKKA

UniProtKB: Pescadillo homolog

+
Macromolecule #10: Ribosome biogenesis protein NSA2 homolog

MacromoleculeName: Ribosome biogenesis protein NSA2 homolog / type: protein_or_peptide / ID: 10 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 29.72458 KDa
SequenceString: MPQNEYIERH RKLHGRRLDA EERARKKAAR EGHKNSENAQ NLRGLRAKLY AKQRHAQKIQ MRKAIKQHEE RNVKGRPAEK EPSDPIPSY LLDRANPTTA KALSSQIKNK RAEKAARFSV PIPKVRGISE EEMFKVVKTG KKTHKKGWKR IVTKPTFVGP D FTRRPVKY ...String:
MPQNEYIERH RKLHGRRLDA EERARKKAAR EGHKNSENAQ NLRGLRAKLY AKQRHAQKIQ MRKAIKQHEE RNVKGRPAEK EPSDPIPSY LLDRANPTTA KALSSQIKNK RAEKAARFSV PIPKVRGISE EEMFKVVKTG KKTHKKGWKR IVTKPTFVGP D FTRRPVKY ERFIRPMGLR YKKANVTHPT LNVTVQLPIL SVKKNPSNPL YTQLGVLTKG TIIEVNVSDL GIVTASGKIA WG RYAQITN NPENDGCVNA VLLV

UniProtKB: Ribosome biogenesis protein NSA2 homolog

+
Macromolecule #11: Putative GTP binding protein

MacromoleculeName: Putative GTP binding protein / type: protein_or_peptide / ID: 11 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 61.479887 KDa
SequenceString: MAGTINKPKK PTSKRKTTRL RAKISKRAAE KKRKERKLAR KNPEWRSKLK KDPGIPNLFP YKERLLQQIE EERIRRKEEL LRKKELAKA AKTGADGDNK DDEQMQEDDE HMIREEELDL DDAMDEDGSD VDESNPLAAL VRSARKAAEE YEKELQSGSE M DEDDEDDS ...String:
MAGTINKPKK PTSKRKTTRL RAKISKRAAE KKRKERKLAR KNPEWRSKLK KDPGIPNLFP YKERLLQQIE EERIRRKEEL LRKKELAKA AKTGADGDNK DDEQMQEDDE HMIREEELDL DDAMDEDGSD VDESNPLAAL VRSARKAAEE YEKELQSGSE M DEDDEDDS DDASDAGSDA GVITEVHGGA TSRKAYDKVF KQVVEQADVI LYVLDARDPE GTRSHDVEQA VMAAAGGGKR LM LILNKVD LVPPPVLKGW LTYLRRFFPT LPLRASNPAP NARTFSHRDI TVQSTSAALF RALKAYAAAR NLKRAIAVGV IGY PNVGKS SVINALLSRL PGSARGGRTP CPAGAEAGVT TAIRAVKIDS KLTLLDSPGI VFPSTASSQT FIPKNPVEAH AHLV LLNAI PPKQIEDPVP AVTLLLKRLS ATPELMDRLM QVYDIPPLLK DPSQGGDATM DFLVQVARKR GRLGRGGVPN IQAAA MTVV TDWRDGRIQG WTEPPKIAVE GVKEGNEGKV VRKIADQEVA PDQKIIVTEW AKEFKLAGLW GDEEQTEEGD KMEA

UniProtKB: Putative GTP binding protein

+
Macromolecule #12: 60S ribosomal protein l7-like protein

MacromoleculeName: 60S ribosomal protein l7-like protein / type: protein_or_peptide / ID: 12 / Number of copies: 2 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 28.821816 KDa
SequenceString: MSSTTVPTQN DILVPETLLK KRKSQEKARA ERAAALEKRK QANKEKRQVI FKRAEKYVKE YREQEREKIR LARIAKQQGS FHIPAEAKL VFVIRIKGIN KIPPKPRKIL QLLRLRQINN GVFVKVTKAT AEMIKIVEPW VAYGYPNLKS VRELIYKRGY G KVNGQRIP ...String:
MSSTTVPTQN DILVPETLLK KRKSQEKARA ERAAALEKRK QANKEKRQVI FKRAEKYVKE YREQEREKIR LARIAKQQGS FHIPAEAKL VFVIRIKGIN KIPPKPRKIL QLLRLRQINN GVFVKVTKAT AEMIKIVEPW VAYGYPNLKS VRELIYKRGY G KVNGQRIP LTDNAIIEEN LGKYGIICIE DLIHEIFTVG PNFKQAANFL WPFKLSNPNG GFRPRKFKHF IEGGDLGNRE EH INALIRA MN

UniProtKB: 60S ribosomal protein l7-like protein

+
Macromolecule #13: Eukaryotic translation initiation factor 6

MacromoleculeName: Eukaryotic translation initiation factor 6 / type: protein_or_peptide / ID: 13 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 26.46884 KDa
SequenceString: MAVRAQFENS NEVGVFATLT NSYCLVALGA SENFYSVFEA ELQDVIPICR TTIAGTRIIG RLTAGNRKGL LVPTTTTDQE LQHLRNSLP DDIRIQRIEE RLSALGNVIV CNDHTALIHP DLERETEEII ADVLGVEVFR QTIADHVLVG SYMALSNQGG L VHPKTSIQ ...String:
MAVRAQFENS NEVGVFATLT NSYCLVALGA SENFYSVFEA ELQDVIPICR TTIAGTRIIG RLTAGNRKGL LVPTTTTDQE LQHLRNSLP DDIRIQRIEE RLSALGNVIV CNDHTALIHP DLERETEEII ADVLGVEVFR QTIADHVLVG SYMALSNQGG L VHPKTSIQ DQDELSSLLG VPLVAGSVNR GSNVIGGGMV VNDWLAVTGL DTTAPELSVI ESVFRLGEGA GPGAINTSMK NT IVESFY

UniProtKB: Eukaryotic translation initiation factor 6

+
Macromolecule #14: DUF2423 domain-containing protein

MacromoleculeName: DUF2423 domain-containing protein / type: protein_or_peptide / ID: 14 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 13.262389 KDa
SequenceString:
MAKSARASRI KENHQRFKKN IAGPVEAARL ERLSAKLMAI AQAPKPDIEM KEESEATAEQ PKESTQTKDD TAMDVDGAKP TLSGVKSGK SIGRKDSRKR RGKKSSIVFP MKGPKRNNLK K

UniProtKB: DUF2423 domain-containing protein

+
Macromolecule #15: Ribosome biogenesis protein RLP24

MacromoleculeName: Ribosome biogenesis protein RLP24 / type: protein_or_peptide / ID: 15 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 26.434312 KDa
SequenceString: MRIENCFFCG RPAWPSKGIT FMRNDGKAFR FCRSKCHKNF KMKRNPRKLK WTKAYRKNAG KEMVVDSTLQ FAARRNVPVR YNRELWQKT LKAMERISEI RARRERVFYK KRMAGKRARE VAAARKLVAE NEHLLPRLRG SEKRRLAELA AERGVDVEEL E REELAKLA ...String:
MRIENCFFCG RPAWPSKGIT FMRNDGKAFR FCRSKCHKNF KMKRNPRKLK WTKAYRKNAG KEMVVDSTLQ FAARRNVPVR YNRELWQKT LKAMERISEI RARRERVFYK KRMAGKRARE VAAARKLVAE NEHLLPRLRG SEKRRLAELA AERGVDVEEL E REELAKLA SKKKSKAFGG EVRRVRVRTD GGVEEITESF GGKNVDEEMD DDDHDDSDRD DDDMDTD

UniProtKB: Ribosome biogenesis protein RLP24

+
Macromolecule #16: Putative 60S ribosomal protein

MacromoleculeName: Putative 60S ribosomal protein / type: protein_or_peptide / ID: 16 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 15.960451 KDa
SequenceString:
MSNVSADLIW EVSRNYNSFL VKQRTGTFSR DALNLTNQHS RKHAGFVNDK ALGIVPAEKG VKVIAKKVKA ANKPASSLYT VTYKSTARK AYKAIASQAA KHGYRADLRQ AAVARASAIL RSQRPVKPEP PKKLRGAAAR RAAAAGKQ

UniProtKB: Large ribosomal subunit protein eL28

+
Macromolecule #17: Zinc finger domain-containing protein

MacromoleculeName: Zinc finger domain-containing protein / type: protein_or_peptide / ID: 17 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 13.710759 KDa
SequenceString:
MGVFAKRTMT KTRRRLRDLD QIERDLRSPR HLQQYKETKA AEDLPGLGLY YCIECAKWFE SETSLVGHRK GKPHKRRLKQ LKEGAYTHE EAMAAIGYRI DNGKKTTEQP KTQDVEMS

UniProtKB: Zinc finger domain-containing protein

+
Macromolecule #18: Nucleolar GTP-binding protein 2

MacromoleculeName: Nucleolar GTP-binding protein 2 / type: protein_or_peptide / ID: 18 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 70.313133 KDa
SequenceString: MGTGKKEKNR LLREGRTPGD PHVKGENFYR SAKKIKTLNI LKEGKPIRDS KGKIVKAASF QSKEVPKAVI EPNRKWFTNT RVISQDTLQ SFREAMAEKQ KDPYTVLLKS NKLPMSLIRD GPKLEDGLKK HQAKMTIERE PFSETFGPKA QRKRPKLSFN T VDELAGYS ...String:
MGTGKKEKNR LLREGRTPGD PHVKGENFYR SAKKIKTLNI LKEGKPIRDS KGKIVKAASF QSKEVPKAVI EPNRKWFTNT RVISQDTLQ SFREAMAEKQ KDPYTVLLKS NKLPMSLIRD GPKLEDGLKK HQAKMTIERE PFSETFGPKA QRKRPKLSFN T VDELAGYS EQSLDSYHAR LEEKKLLSGA AGAAALESEA PVEEDFSVAT AKEAIFNKGT SKRIWNELYK VIDSSDVILH VL DARDPLG TRCRHVEKYL AAEAPHKHLV FVLNKIDLVP SSQAAAWIRI LQKDHPTCAM RASITNPFGR GSLIDLLRQF SVL HKDRKQ ISVGLIGYPN VGKSSIINAL RGKAVAKVAP IPGETKVWQY VTLMKRIYLI DCPGIVPPNQ HDTPEDLLLR GVVR VENVE HPEQYIPAVL RKVKQHHMER TYELRGWKDH IEFLEMLARK SGRLLKGGEP DVDGVAKQVL NDFMRGKIPW FTPAP EPEK GDEPVIEGRA GRLGEMPKKR KREETESVAD TSMADSTAAA EPEDESEDEG SDSESEFSGF SSDSDSEVEV EVGKEA QDD SAPDMIPLDE TSDEDEYNEE DDDGEEDGSE DGDEMSDNDI EDASDIESES ESEPSPPKRR KKAR

UniProtKB: Nucleolar GTP-binding protein 2

+
Macromolecule #19: Ribosome biogenesis protein NOP53

MacromoleculeName: Ribosome biogenesis protein NOP53 / type: protein_or_peptide / ID: 19 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 50.981254 KDa
SequenceString: MAVLKPLTGD NTEAPKQHSQ PSRKGKKAWR KNIDLTEVEQ GLEELNEQII KGGVIAEKPS EELFTIDVEG DASLEKRFSK HIKKGLKAD EIIAQRSALP AVSVRKRAGD EPASKVSDGI LPVKRQRTNY ITHKELIRIK KVADGEHETT VDIVDATYDP W AQDPIEPK ...String:
MAVLKPLTGD NTEAPKQHSQ PSRKGKKAWR KNIDLTEVEQ GLEELNEQII KGGVIAEKPS EELFTIDVEG DASLEKRFSK HIKKGLKAD EIIAQRSALP AVSVRKRAGD EPASKVSDGI LPVKRQRTNY ITHKELIRIK KVADGEHETT VDIVDATYDP W AQDPIEPK KQDPVRPVLP KPDPLKKPKT LEQKPISLAA NGKSVPAVPK PTGGYSYNPA FTDYQQRLME ESEKAIEAER KR LQELELE RQKMEAAARS AAEAEAAEAR AEMSEWEDDS AWEGFESDGE GLNIKAKKPR RKTKAERNRI KRRKEEERKR KHE EAMKRK QQQLEQAKKI AAEVEERERQ LALQKIEMSD DSEEGDDTVL RRKQLGKFKL PEKDLELVLP DELEDSLRRL KPEG NLLKD RYRSMIVRGK LEARRKIPFR KQAKTKLTEK WTFKDFRI

UniProtKB: Ribosome biogenesis protein NOP53

+
Macromolecule #20: Ribosome production factor 2 homolog

MacromoleculeName: Ribosome production factor 2 homolog / type: protein_or_peptide / ID: 20 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 39.92734 KDa
SequenceString: MLRQIKPRNA RSKRALEKRA PKIVENPKTC LFLRGTTCSQ ITQDAMNDLY AMRQVHAKRF HKKNAIHPFE DATSLCFFSE KNDCSLMVF GSSNKKRPHT LTFVRMFDYK VLDMLEFYLD PDTYRSISQF KTSKIPIGMR PMMVFAGTAF ESPVPNAFTM A KSMLIDFF ...String:
MLRQIKPRNA RSKRALEKRA PKIVENPKTC LFLRGTTCSQ ITQDAMNDLY AMRQVHAKRF HKKNAIHPFE DATSLCFFSE KNDCSLMVF GSSNKKRPHT LTFVRMFDYK VLDMLEFYLD PDTYRSISQF KTSKIPIGMR PMMVFAGTAF ESPVPNAFTM A KSMLIDFF RGEPSDKIDV EGLRFVVVVT ADEPTSSTST NNDGENPAPL PGMTDPRSID PSQKPILRLR VYGIRTKRSG TR LPRVEVE EHGPRMDFRL GRMREPDPAM LKEAMKKAKT PQEERTKKNI SMDLLGDKIG RIHMGKTDLS KLQTRKMKGL KRG RDEDEG GEDDRTDVVE AGSGEKKKKK KVKG

UniProtKB: Ribosome production factor 2 homolog

+
Macromolecule #21: Ribosome biogenesis regulatory protein

MacromoleculeName: Ribosome biogenesis regulatory protein / type: protein_or_peptide / ID: 21 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 22.817281 KDa
SequenceString: MSTDTSKPAR LPVTVEKPTP YTFDLGLLLA NDPNPVNVPK TTDTQVLEQH LASVARDGAQ VLINQLLTTT TITATKDGVL LTLPPPTTP LPREKPVPQP KPETKWQAFA RRRGIKPKTR EQRRNLQYNP TTGQWERKWG YKGANKRGET DPIIEVSAAK E AMRPEGTS ...String:
MSTDTSKPAR LPVTVEKPTP YTFDLGLLLA NDPNPVNVPK TTDTQVLEQH LASVARDGAQ VLINQLLTTT TITATKDGVL LTLPPPTTP LPREKPVPQP KPETKWQAFA RRRGIKPKTR EQRRNLQYNP TTGQWERKWG YKGANKRGET DPIIEVSAAK E AMRPEGTS VRGDKRREIR ARVKKNQKQM LRNQRIAAEK MGKK

UniProtKB: Ribosome biogenesis regulatory protein

+
Macromolecule #22: Ribosome assembly protein 4

MacromoleculeName: Ribosome assembly protein 4 / type: protein_or_peptide / ID: 22 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 57.620664 KDa
Recombinant expressionOrganism: Thermochaetoides thermophila DSM 1495 (fungus)
SequenceString: MATLAPPPSK RQRREEIQRT QTQQDVTPLV ATDLGSFKAN FIDSDGNQMT DVVEINFADA TEKNISNLLN TLLGRDREEF TPYRFRIHI PGKDLIIDQY PNDLLSLLQK HGVTNPFDTT ITLSAEPQAI FKVHAVSRLA HRIPGHGQPI LSCQFSPVSS S RLATGSGD ...String:
MATLAPPPSK RQRREEIQRT QTQQDVTPLV ATDLGSFKAN FIDSDGNQMT DVVEINFADA TEKNISNLLN TLLGRDREEF TPYRFRIHI PGKDLIIDQY PNDLLSLLQK HGVTNPFDTT ITLSAEPQAI FKVHAVSRLA HRIPGHGQPI LSCQFSPVSS S RLATGSGD NTARIWDTDS GTPKFTLKGH TGWVLGVSWS PDGKYLATCS MDTTVRVWDP ESGKQVNQEF RGHAKWVLAL AW QPYHLWR DGTARLASAS KDCTVRIWLV NTGRTEHVLS GHKGSVSCVK WGGTDLIYTG SHDRSVRVWD AVKGTLVHNF TAH GHWVNH IALSSDHVLR TAYHDHTKEV PGTEEERRAK AKERFEKAAK IKGKVAERLV SASDDFTMYL WDPTNNGSKP VARL LGHQN KVNHVQFSPD GTLIASAGWD NSTKLWNARD GKFIKNLRGH VAPVYQCAWS ADSRLVVTGS KDCTLKVWNV RTGKL AMDL PGHEDEVYAV DWAADGELVA SGGKDKAVRT WRN

UniProtKB: Ribosome assembly protein 4

+
Macromolecule #23: rRNA-processing protein

MacromoleculeName: rRNA-processing protein / type: protein_or_peptide / ID: 23 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 14.710419 KDa
SequenceString:
MNMSETQVNI TAAPAPATTK KNLGMRKNGQ VWLPAKKAFR PTKGLTSWEL RVKKRQEQAA MKAKEREMKE EKEAERQKRI QAIKERRKK KEEKERYEQL AAKMHKKRLE RLKRKEKRNK LLNS

UniProtKB: rRNA-processing protein

+
Macromolecule #24: 60S ribosomal protein L2-like protein

MacromoleculeName: 60S ribosomal protein L2-like protein / type: protein_or_peptide / ID: 24 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 27.598875 KDa
SequenceString: MGRVIRNQRK GRGSVFTAHT RLRKAPAKFR PLDYAERHGY IRGIVKEIIH DPGRGAPLAR VVFRSPYKYK QITETFIANE GMYTGQFIY AGKNAALTVG NILPLSSVPE GTVVSNVEEK PGDRGALGRT SGNYVTVVGH NPDEGKTRIK LPSGAKKVVP S SSRGMIGI ...String:
MGRVIRNQRK GRGSVFTAHT RLRKAPAKFR PLDYAERHGY IRGIVKEIIH DPGRGAPLAR VVFRSPYKYK QITETFIANE GMYTGQFIY AGKNAALTVG NILPLSSVPE GTVVSNVEEK PGDRGALGRT SGNYVTVVGH NPDEGKTRIK LPSGAKKVVP S SSRGMIGI VAGGGRTDKP LLKASRAKHK FAVKRNRWPK TRGVAMNPVD HPHGGGNHQH IGKASTISRY AAQGQKAGLI AA RRTGLLR GTQKTKE

UniProtKB: 60S ribosomal protein L2-like protein

+
Macromolecule #25: 60S ribosomal protein L3-like protein

MacromoleculeName: 60S ribosomal protein L3-like protein / type: protein_or_peptide / ID: 25 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 44.456855 KDa
SequenceString: MSHRKYEAPR HGSLAFLPRK RAARHRGRVK SFPKDDPKKP VHLTAAMGYK AGMTTIVRDL DRPGAKAHKK EVVEAVTIID CPPMVVVGL VGYIETPRGL RSLTTVWAEH LSDEVKRRFY KNWYKSKKKA FTKYAKKYAE NNGASITREL ERIKKYCTVV R VLAHTQIR ...String:
MSHRKYEAPR HGSLAFLPRK RAARHRGRVK SFPKDDPKKP VHLTAAMGYK AGMTTIVRDL DRPGAKAHKK EVVEAVTIID CPPMVVVGL VGYIETPRGL RSLTTVWAEH LSDEVKRRFY KNWYKSKKKA FTKYAKKYAE NNGASITREL ERIKKYCTVV R VLAHTQIR KTPLKQKKAH LMEIQINGGS VADKVEFGRS LFEKPVTIDT IFEKDEMIDV IAVTKGHGFV GVTARWGTKK LP RKTHKGL RKVACIGAWH PSHVQWTVAR AGQMGYHHRT SVNHKIYRIG KGDDEANAST ETDLTKKKIT PMGGFVRYGE VNN DYVMIK GSVPGVKKRI MTLRKSLFTH TSRKALEKVE LKWIDTSSEF GHGAFQTAAE KKQFMGTLKK DLQTSA

UniProtKB: 60S ribosomal protein L3-like protein

+
Macromolecule #26: 60S ribosomal protein L4-like protein

MacromoleculeName: 60S ribosomal protein L4-like protein / type: protein_or_peptide / ID: 26 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 39.439938 KDa
SequenceString: MASRPTVTVF GADGKPTGAT EVLPKVFSAP IRPDIVKHVH TGMAKNKRQP YAVSEKAGHQ TSAESWGTGR AVARIPRVSG GGTHRAGQG AFGNMCRSGR MFAPTKIWRK WHVKINQGQK RFATASALAA SAVAPLLMAR GHQVSTVPEV PLVVDSAAVA G DAVAKTAA ...String:
MASRPTVTVF GADGKPTGAT EVLPKVFSAP IRPDIVKHVH TGMAKNKRQP YAVSEKAGHQ TSAESWGTGR AVARIPRVSG GGTHRAGQG AFGNMCRSGR MFAPTKIWRK WHVKINQGQK RFATASALAA SAVAPLLMAR GHQVSTVPEV PLVVDSAAVA G DAVAKTAA AYKLLKAIGA GPDVEKVKKS KKLRAGKGKM RGRRHRQRRG PLIVYSPEHD GKELVKGFRN IPGVETCPVD AL NLLQLAP GGHLGRFIVW TSAAIKQLDA VYESKKGFFL PANIVSQADL SRLINSTEIQ SVLRAPKGEA RTKRACVQKK NPL RNKQIM LRLNPYASTF AKEKLGEVKA EEGKPPKVPA SFKELLHEA

UniProtKB: 60S ribosomal protein L4-like protein

+
Macromolecule #27: 60S ribosomal protein l5-like protein

MacromoleculeName: 60S ribosomal protein l5-like protein / type: protein_or_peptide / ID: 27 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 35.034605 KDa
SequenceString: MAFHKLVKNS AYYSRFQTKF KRRRQGKTDY YARKRLITQA KNKYNAPKYR LVVRFTNRDI ITQMVTSEIN GDKIFAAAYS HELRAYGIN HGLTNWAAAY ATGLLLARRV LAKLGLDKTF TGVEEPNGEY TLTEAAETED GERRPFKAIL DVGLARTSTG A RVFGVMKG ...String:
MAFHKLVKNS AYYSRFQTKF KRRRQGKTDY YARKRLITQA KNKYNAPKYR LVVRFTNRDI ITQMVTSEIN GDKIFAAAYS HELRAYGIN HGLTNWAAAY ATGLLLARRV LAKLGLDKTF TGVEEPNGEY TLTEAAETED GERRPFKAIL DVGLARTSTG A RVFGVMKG ASDGGIFIPH SENRFPGYDI ETEELDTEVL KKYIYGGHVA EYMETLADDD EERYKSQFVK YIEDDVEADS LE ELYAEAH KQIRADPFRK YVSDAPKKSK EEWKAESLKY KKAKLSREER KARVEAKIKQ LLAEQDE

UniProtKB: 60S ribosomal protein l5-like protein

+
Macromolecule #28: 60S ribosomal protein L6

MacromoleculeName: 60S ribosomal protein L6 / type: protein_or_peptide / ID: 28 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 22.132994 KDa
SequenceString: MSAAPTTKTF GKGTRTVPAP SEKAQKWYPA EDEAQPKKVR KAVRPWTPRK SLQPGTVLIL LAGRFRGKRV VLLKCLDQGV LLVTGPFKI NGVPLRRVNA RYVIATSVKV DLTGVDQAKI DEVAQPKYFT AEKAKEKASE EAFFKQGEKP QKKPVSSTRA A DQKAIDKA ...String:
MSAAPTTKTF GKGTRTVPAP SEKAQKWYPA EDEAQPKKVR KAVRPWTPRK SLQPGTVLIL LAGRFRGKRV VLLKCLDQGV LLVTGPFKI NGVPLRRVNA RYVIATSVKV DLTGVDQAKI DEVAQPKYFT AEKAKEKASE EAFFKQGEKP QKKPVSSTRA A DQKAIDKA LIANIKKVDM LASYLASSFS LRKGDKPHLM KF

UniProtKB: 60S ribosomal protein L6

+
Macromolecule #29: 60S ribosomal protein L8

MacromoleculeName: 60S ribosomal protein L8 / type: protein_or_peptide / ID: 29 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 29.74449 KDa
SequenceString: MPPKSGKKVA PAPFPQGKAG AKKAPKNPLL EKRPRNFGIG QDIQPKRNLS RMVKWPEYIR LQRQKKILRM RLKVPPAIAQ FQYTLDKNL AAQAFKLLNK YRPETKQEKK ERLLREATAI KEGKKKEDVS KKPYTVKYGL NHVVGLIENK KASLVLIAND V DPIELVVF ...String:
MPPKSGKKVA PAPFPQGKAG AKKAPKNPLL EKRPRNFGIG QDIQPKRNLS RMVKWPEYIR LQRQKKILRM RLKVPPAIAQ FQYTLDKNL AAQAFKLLNK YRPETKQEKK ERLLREATAI KEGKKKEDVS KKPYTVKYGL NHVVGLIENK KASLVLIAND V DPIELVVF LPALCRKMGI PYAIIKGKAR LGTLVHKKTA AVVAITEVRS EDKNELAKLI SAVKEGYLEK VEDTRKRWGG GI MGFKAQK REEKRKKSLE TAIKV

UniProtKB: 60S ribosomal protein L8

+
Macromolecule #30: 60S ribosomal protein l9-like protein

MacromoleculeName: 60S ribosomal protein l9-like protein / type: protein_or_peptide / ID: 30
Details: This protein component has a sample sequence that does not match the UniProt entry 'G0S0E5' and should not be mapped to any UniProt entry.
Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 25.867949 KDa
SequenceString: MRYIHSEETI PVPENGTFRK FRRNDYTFGR TRGREKKRGT TSSKIGELDI NGVKVSIKSR LVTVEGPRGK LQKDLSHIAV NFSVVKKGV IGLEIHHGSR KDVAALRTVR TIINNMIIGV TKGFKYKMRY VYAHFPINVN VEKNAETGCY EVEIRNFIGE K IVRKVVMA ...String:
MRYIHSEETI PVPENGTFRK FRRNDYTFGR TRGREKKRGT TSSKIGELDI NGVKVSIKSR LVTVEGPRGK LQKDLSHIAV NFSVVKKGV IGLEIHHGSR KDVAALRTVR TIINNMIIGV TKGFKYKMRY VYAHFPINVN VEKNAETGCY EVEIRNFIGE K IVRKVVMA PGVEVEISKA QKDELILSGN SLEAVSQSAA DIQQICKVRN KDIRKFLDGI YVSEKGNIVE D

+
Macromolecule #31: Putative ribosomal protein

MacromoleculeName: Putative ribosomal protein / type: protein_or_peptide / ID: 31 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 20.119275 KDa
SequenceString:
MSSEKAQNPM RELRIQKLVL NISVGESGDR LTRAAKVLEQ LSGQTPVYSK ARYTVRQFGI RRNEKIAVHV TVRGPKAEEI LERGLKVKE YELRRRNFSE TGNFGFGISE HIDLGIKYDP SIGIYGMDFY CCMTRPGERV AKRRRCKSRI GASHRITREE T IRWFKQRF DGIVR

UniProtKB: Putative ribosomal protein

+
Macromolecule #32: 60S ribosomal protein L12-like protein

MacromoleculeName: 60S ribosomal protein L12-like protein / type: protein_or_peptide / ID: 32 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 17.802676 KDa
SequenceString:
MPPKFDPNEI KIIHLRATGG EVGASSALAP KIGPLGLSPK KVGEDIAKAT ADWKGLRVTV RLTIQNRQAQ VSVVPTASAL IIRALKEPP RDRKKEKNIK HNKSVSLDEI IEIARTMRFK SFSKDLKGGV KEILGTAFSV GCQVDGKSPK AISDAIEAGE I DIPDE

UniProtKB: 60S ribosomal protein L12-like protein

+
Macromolecule #33: 60S ribosomal protein L13

MacromoleculeName: 60S ribosomal protein L13 / type: protein_or_peptide / ID: 33 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 24.19118 KDa
SequenceString: MAIKHNQQIP NNHFRKHWQR RVRCHFDQPG KKVTRRLARR AKAAALAPRP VDKLRPIVRC PTVKYNRRTR LGRGFTLEEL KAAGIPRLL APTIGIAVDH RRKNLSEESL AANVQRLKDY KARLILFPRK SNKPKKADTP KDQQTAETTT SLRTSFGVEQ P LAPGFTEI ...String:
MAIKHNQQIP NNHFRKHWQR RVRCHFDQPG KKVTRRLARR AKAAALAPRP VDKLRPIVRC PTVKYNRRTR LGRGFTLEEL KAAGIPRLL APTIGIAVDH RRKNLSEESL AANVQRLKDY KARLILFPRK SNKPKKADTP KDQQTAETTT SLRTSFGVEQ P LAPGFTEI SKSEIPAGIE GGAYRALRKA RSDARLVGVR EKRAKEKAEA EANKK

UniProtKB: 60S ribosomal protein L13

+
Macromolecule #34: 60S ribosomal protein L14-like protein

MacromoleculeName: 60S ribosomal protein L14-like protein / type: protein_or_peptide / ID: 34 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 16.111901 KDa
SequenceString:
MAEINVEATS WRRVEVGRVL KLENGSLAAI VEIIDHKRVL ADGPSSDPKL ATPRGIVPLS RALLTPIVIP KLPRGARTGA VKKAWEAYG VDAKWKETNW AKKQLQQERR QSLTDFDRFK VMRLKKQRRF EERKALAKIK AAA

UniProtKB: Putative plasmid related protein

+
Macromolecule #35: Ribosomal protein L15

MacromoleculeName: Ribosomal protein L15 / type: protein_or_peptide / ID: 35 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 24.307287 KDa
SequenceString: MGALKYLEEL SKKKQSDVVR FLLRVRCWEY RQLNVIHRAS RPSRPDKARR LGYKAKQGYV IYRVRVRRGG RKRPVPKGAT YGKPTNQGV NQLKYQRSLR ATAEERVGRR CSNLRVLNSY WVNQDSTYKY YEVILVDPNH KAIRRDPRIN WICNPVHKHR E CRGLTSTG ...String:
MGALKYLEEL SKKKQSDVVR FLLRVRCWEY RQLNVIHRAS RPSRPDKARR LGYKAKQGYV IYRVRVRRGG RKRPVPKGAT YGKPTNQGV NQLKYQRSLR ATAEERVGRR CSNLRVLNSY WVNQDSTYKY YEVILVDPNH KAIRRDPRIN WICNPVHKHR E CRGLTSTG KKSRGLNKGH RFNKTRAGRR KTWKRHNTLS LWRYR

UniProtKB: Ribosomal protein L15

+
Macromolecule #36: 60S ribosomal protein L16-like protein

MacromoleculeName: 60S ribosomal protein L16-like protein / type: protein_or_peptide / ID: 36 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 22.993195 KDa
SequenceString: MSSFESVVVI DGKGHLLGRL ASIVAKQLLS GQKIVVVRCE ALNISGEFFR AKLKYHAYLR KMTRYNPTRG GPFHFRAPSR IFYKAVRGM IPHKTARGAA ALERLKVFEG VPPPYDKKKK MVVPQALRVL RLQPGRKYCT VGRLSHEVGW KYQDVVARLE E RRKAKGAA ...String:
MSSFESVVVI DGKGHLLGRL ASIVAKQLLS GQKIVVVRCE ALNISGEFFR AKLKYHAYLR KMTRYNPTRG GPFHFRAPSR IFYKAVRGM IPHKTARGAA ALERLKVFEG VPPPYDKKKK MVVPQALRVL RLQPGRKYCT VGRLSHEVGW KYQDVVARLE E RRKAKGAA YYERKKLAAR QLSEAKKAAA AKVDPKVSEA LAAYGY

UniProtKB: 60S ribosomal protein L16-like protein

+
Macromolecule #37: 60S ribosomal protein l17-like protein

MacromoleculeName: 60S ribosomal protein l17-like protein / type: protein_or_peptide / ID: 37 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 21.072207 KDa
SequenceString:
MVRYAATEIA PTKSARARGS YLRVSFKNTR ETAQAINGWK LQRALTFLQN VIDKKEAVPM RRYAGSTGRT AQGKQWGVSR ARWPVKSAQ FLIGLLKNAE ANADAKGLDT GNLIIKHIQV NQAPKQRRRT YRAHGRINPY MSNPCHIELI LTEAEETVQK S EAVVRDVE SHLSSRQRGV RIRRALTAA

UniProtKB: 60S ribosomal protein l17-like protein

+
Macromolecule #38: Ribosomal protein L18-like protein

MacromoleculeName: Ribosomal protein L18-like protein / type: protein_or_peptide / ID: 38 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 24.195535 KDa
SequenceString: MDLVCAFIGP LFAPGARRLN LEEIAAESSS GIDLRWKHVR SSHRKAPKSD NVYLKLLVKL YRFLARRTEA PFNKVVLRRL FMSRINRPP VSLSRIARNL KNGNEKKTVV VVATVTDDNR LLQVPKMEVA ALRFTAKARA RIEAAGGRTL TLDQLALEKP T GANTLLLR ...String:
MDLVCAFIGP LFAPGARRLN LEEIAAESSS GIDLRWKHVR SSHRKAPKSD NVYLKLLVKL YRFLARRTEA PFNKVVLRRL FMSRINRPP VSLSRIARNL KNGNEKKTVV VVATVTDDNR LLQVPKMEVA ALRFTAKARA RIEAAGGRTL TLDQLALEKP T GANTLLLR GPKNAREAVK HFGFGPHKHK KPYVRSKGRK FERARGRRRS RGFKV

UniProtKB: Ribosomal protein L18-like protein

+
Macromolecule #39: Ribosomal protein L19

MacromoleculeName: Ribosomal protein L19 / type: protein_or_peptide / ID: 39 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 317.092281 KDa
SequenceString: MSEPVANDAA PGSFDLEQAR TALTSSSTTV RIAQLRAIDE KISHNSLDRP ALLGLLKVLF WTHTFYADRP SRRAVQKCLT SITKCSEAE SFVPPLVAAI RQEAQKQAIA QANSFALVEW CSLLIQNLAG TSLWEKCSKD LVLATADALE KSLQPTARGS V GHSALVIT ...String:
MSEPVANDAA PGSFDLEQAR TALTSSSTTV RIAQLRAIDE KISHNSLDRP ALLGLLKVLF WTHTFYADRP SRRAVQKCLT SITKCSEAE SFVPPLVAAI RQEAQKQAIA QANSFALVEW CSLLIQNLAG TSLWEKCSKD LVLATADALE KSLQPTARGS V GHSALVIT RRGFRKLVQA DQAAVSTAIG VLAAKDAKPT AKNSVLLGVI AGVCARQPEA KAVVEDLKGQ YFTFYAREII GS RTALPSH IADGLHDFFA AFVSLEDLDK EVFPAIEKGL LRAPEVVLND LITPLVKALP KLDLSKALNS RFVKPLLSNI KSS NAVIRS GAVRAFREIA TVCRDFADLE KTADEVLGPL KTNKLASADH RVLHSEMLSG LPLSASIATK IATGLPAVTS KEAN EAALS AETLALNASA LFLLRTPEVP KALLDAYVKG LGDKKVSSRR IWILRTGDLL QAFAQEAELP AGFVAFAEAV VPSLL TIFN EVVANPTAAV QSGLVTGALV VAGLSGLLQR LENANIQALL KKAAVQKNSL ILDPKPSFVL SQRLYSKYPE DDLKWF CRA LSAIVEGLLS SSDAIKLAWT QAFIFLICSA TTPSAVRRQA IDALSDLSAR SLKPGCQFVA TEIIKGLWHW IATSEAA EK ESAAVLAKSG TSNLHLVLKA ICLSPAELNR RSGGDVDKAQ LQAQMCSLLV LAKQQLIPRA SWIDLCLKVQ VDPGQLAK D HEDALIDEIV RCTGHEQKSE ATKQAAYSAA AELVFVSPEN MTSRIVALIQ DDLDAAVVST VGPLEAAIFR TPEGTTFVD VLAKRQNVVP NKNVKDYDLL KWEEELRQQL AEKKGIQKKL TAEEQAKVSA QLKKEAEIRE NVRKIAAKLL RGFGVVKALA TGPPTDATR WMGAAVSSTL AAINAGATRI TGETGPLAFV SLSEQITSRI GSFIRPFMGV ATLRAYEVTA LPENLTEEPF E ELITRVLY RLRFVGEQRP LDTVSLIYVL PLVLYVLEKG GFAKDADEKD AQLVLAIEIL SFHTDVAFDE ALPRAEILSS LI SSMQKYS QHYKILKDCF SDMVRCIAPN ISPAEIGVLA RGAIVPQTSV RTAVLQAISA DVDMSDVNAS EEIWLACHDD IDE NAELGR EIWEESEWKT SEELGHKMIP YLESKDVQLR RAAAKSLAEV AGQHPDVVAP ILEKLRESYV ELAKPRVQQL DEFG MPKKM DLSDPWEARH GIALAFKGLA PHLEKRQLEP YFNFLIEQGP LGDQSAGVRA EMLEAANMTI EIHGKEILDR LMKTF EKVL EAPDKNSEAA DRVNEAVIIM YGALARHLKP GDKKIPVVIE RLLATLSTPS EAVQYAIAEC LPPLVRTCAD KSSKYF DEM MEILLTSKKY SEQRGAAYGL AGLVLGRGIN VLKEYRIMTQ LNSALENKKE IRQRESAMIA YELLSTILGR LFEPYVI QI VPQLLAGFGD GNADVREAAL AAAKACFAKL SSYGVKQILP TLLNGLDDDQ WRSKKGACDL LGAMAYLDPQ QLAQNLPE I IPPLTAVLND SHKEVRAAAN RSLKRFGEVI TNPEIKSLID ILLKALSDPT KYTDDALDAL IKVQFVHYLD APSLALVSR ILQRGLGDRS NTKRKASQVI GSLAHLTERK DLIAHLPVLV AGLKVAVVDP VPTTRATASR ALGSLVEKLG EDALPDLIPN LMQTLKSDT SAGDRLGSAQ ALSEVLAGLG TSRLEETLPT ILQNVESPKP AVREGFMSLF IFLPVCFGNS FANYLGKIIP P ILSGLADD VESIRETALR AGRLLVKNFA VRAVDLLLPE LERGLADDNY RIRLSSVELV GDLLFNLAGV KASANKEEDE AD QDITKEA GASLREVLGE EKRNKILSAL YVCRCDTAGA VRAAAVTVWK QLVHSPRTLK ELVPTLTQLL IKRLGSSNME HKV IASNAL GELIKKAGDG VLATLLPTLE EGLQTSRDVN AKQGICLALK ELISSASPEA LEDHEKTLIS VVRTALTDSD SDVR EAAAE AFDSLQQIIG KRAIDQVLPF LLNLLRSEEE ANNALAALLT LLTEPTRANI ILPNLIPTLI TPPISAFNAK ALASL SKVA GAAMNRRLPN IINSLMDNIV GCADETLREE LDTSFDTVIL SIDDTDGLNV VMNVLLQLIK HEDHRKRAAT GRHLAK FFS AATVNYSRYN QDIIRALLIS FDDKDMEVVK ASWNALNEFT KRLKKEEMEG LVISTRQTLL QVGVAGRELA GFELPKG IN AILPIFLQGL MNGTAEQRVA AALGISDIVD RTTEASLKPF VTQITGPLIR VVSERSTEVR SAILLTLNHL LEKMPTAL K PFLPQLQRTF AKSLADTSSE ILRSRAARAL GTLIKYTPRV DPLIAELVTG SKTTDAGVKT AMLKALYEVI SKAGSNMGE SSRAAVLGLI DMEPDENDKA MTITNAKLFG ALMKNVPADM AVGLLKNRVM VREFTTSSVL ALNAVLLESP SSLLDSPLAE DLPELLCQG IESKDAFIAD NFIMATGKYL LHDSPKAFET TKAIFTSLAK LIPPGNPGDS RRLSLVLVRT MARKQPDMVR P HLSLLAPP IFSSVRDMVI PVKLAAEAAF VQLFAVADEE SKVFDKWITA ATDLAPNVKR SMQDYFKRVT LRLGAQARER RE AEGGAGT LGLSADEVED EKELMAVGKP RVSWNRNPEK LKKPRAQSEV DPGPVPLKTV ARARQKSFKM VNLRTQKRLA ASV LGCGEG KVWLDPNEVS EISNANSRQS IRKLVADGLI IKKPVTMHSR SRARELNLAR RIGRHRGFGK RKGTADARMP QQVL WMRRQ RVLRRLLVKY RASGKIDKHL YHELYHLAKG NTFKHKRALV EHIHRAKAEK ARERQIKEEM DAKRARTKAA RERKQ ERQA AKRNALLGEE EESK

UniProtKB: Ribosomal protein L19

+
Macromolecule #40: 60S ribosomal protein L20

MacromoleculeName: 60S ribosomal protein L20 / type: protein_or_peptide / ID: 40 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 20.341893 KDa
SequenceString:
MGRLQEYQVI GRHLPTEANP NPALYRMRIF APNEVVAKSR FWYFLRGLKK VKKATGEIVS VNVISEKHPL KVKNFGIWLR YDSRSGTHN MYKEYRETSR VAAVEAMYAD MAARHRARFR SIHILKVVEL EKTEDVKRPY IKQLVAKNLS FPLPHRVPKI S TKKIFSAK RPSTFS

UniProtKB: 60S ribosomal protein L20

+
Macromolecule #41: 60S ribosomal protein l21-like protein

MacromoleculeName: 60S ribosomal protein l21-like protein / type: protein_or_peptide / ID: 41 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 18.159227 KDa
SequenceString:
MGHAAGLRSG TRYAFSRGFR KHGQIPLSTY LRTYRVGDIV DIKVNGAVQK GMPHKFYHGK TGVVYNVTKS AVGVIVYKRV KHRYIEKRI NVRIEHVKPS RSREDFLRRV KENAELKKKA KAEGVPVQLK RQPAMPREAH TVSIADNKPV TLAPVAYETT I

UniProtKB: 60S ribosomal protein l21-like protein

+
Macromolecule #42: 60S ribosomal protein L22-like protein

MacromoleculeName: 60S ribosomal protein L22-like protein / type: protein_or_peptide / ID: 42 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 14.302563 KDa
SequenceString:
MAPVAKKSGA KGKGPKVTKK FIINASQPAS DKIFDVSAFE KFLNERIKVD GRVGNLGDVI KISQIGDGKV EIIAHNDLSG RYLKYLTKK FLKKMQLRDW LRVVATSKGV YELKFYNIVN DEAEEEED

UniProtKB: 60S ribosomal protein L22-like protein

+
Macromolecule #43: 60S ribosomal protein l23-like protein

MacromoleculeName: 60S ribosomal protein l23-like protein / type: protein_or_peptide / ID: 43 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 14.674428 KDa
SequenceString:
MAKQKRGAPG GKLKMTLGLP VGAIMNCADN SGARNLYIIA VKGAGARLNR LPAGGVGDMV MATVKKGKPE LRKKVHPAVI VRQAKPWKR FDGVFLYFED NAGVIVNPKG EMKGSAITGP VGKEAAELWP RIASNAGVVM

UniProtKB: 60S ribosomal protein l23-like protein

+
Macromolecule #44: 60S ribosomal protein L25-like protein

MacromoleculeName: 60S ribosomal protein L25-like protein / type: protein_or_peptide / ID: 44 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 17.175334 KDa
SequenceString:
MAPKDVKKGG ASKAAKGAQA KKAAQAALKG VHSHKKTKVR KSTTFHRPKT LVLSRAPKYP RKSIPHEPRL DEHKIIIHPL NTEGALKKI EEQNTLVFIV DVKANKAQIK QALKKLYDID TVKINTLIRP DGTKKAFARL TPDVDALDIA ATKLGLV

UniProtKB: 60S ribosomal protein L25-like protein

+
Macromolecule #45: 60S ribosomal protein L26-like protein

MacromoleculeName: 60S ribosomal protein L26-like protein / type: protein_or_peptide / ID: 45 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 15.565322 KDa
SequenceString:
MKVRPTVSSS RRKARKAHFS APSSVRRVIM SAPLSKELRE KYNVRSIPIR KGDEVQIVRG AHKDKEGKVT SVYRLKYVIH VERVTREKA TGQTVPIGIH PSNVVITKLH LDKDRENILA RIKAGREQVA KAKGKKTAA

UniProtKB: 60S ribosomal protein L26-like protein

+
Macromolecule #46: 60S ribosomal protein L27

MacromoleculeName: 60S ribosomal protein L27 / type: protein_or_peptide / ID: 46 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 15.803652 KDa
SequenceString:
MKFLKTSRVC LVTRGRYAGK KVVIIQPVDQ GTKSHPYGHA LVAGIERYPS KITRRMSKAR IEKRSKIKPF IKVINYNHLM PTRYTLELE GLKAVINADT FKEPSQREEA KKTVKKVLED RYNSGKNRWF FTPLRF

UniProtKB: 60S ribosomal protein L27

+
Macromolecule #47: 60S ribosomal protein L28-like protein

MacromoleculeName: 60S ribosomal protein L28-like protein / type: protein_or_peptide / ID: 47
Details: This protein component has a sample sequence that does not match the UniProt entry 'G0SGT6' and should not be mapped to any UniProt entry.,This protein component has a sample sequence that ...Details: This protein component has a sample sequence that does not match the UniProt entry 'G0SGT6' and should not be mapped to any UniProt entry.,This protein component has a sample sequence that does not match the UniProt entry 'G0SGT6' and should not be mapped to any UniProt entry.,This protein component has a sample sequence that does not match the UniProt entry 'G0SGT6' and should not be mapped to any UniProt entry.,This protein component has a sample sequence that does not match the UniProt entry 'G0SGT6' and should not be mapped to any UniProt entry.
Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 16.848539 KDa
SequenceString:
MPTRFSKTRK HRGHVSAGKG RVGKHRKHPG GRGMAGGQHH HRTNLDKYHP GYFGKVGMRH FHLLRNHYWR PSINIDKLWS LVPSDVREQ YLSGQKKDTA PVIDLLSHGY AKLLGKGRLP EIPVVVRARY VSAEAERKVK EAGGVVELVA

+
Macromolecule #48: 60S ribosomal protein l30-like protein

MacromoleculeName: 60S ribosomal protein l30-like protein / type: protein_or_peptide / ID: 48 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 11.602616 KDa
SequenceString:
MAPKKSKSEA QSIGAKLALV IKSGKVVLGY RSTLKALRSG KAKLILIAAN TPPLRKSELE YYSMMSKTPV HHYSGTNIEL GTACGKLFR CSTMAILDAG DSDILADQQ

UniProtKB: 60S ribosomal protein l30-like protein

+
Macromolecule #49: Putative 60S ribosomal protein

MacromoleculeName: Putative 60S ribosomal protein / type: protein_or_peptide / ID: 49 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 13.872177 KDa
SequenceString:
MSSTQKKQRS AIADVVAREY TIHLHKRLHG VTFKKRAPRA IKEIKKFAQK AMGTSDVRLD PQLNKKVWEQ GIKGVPFRIR VRISRRRND EEGAKEKLYS YVQAVNVKNP KGLLTSVVEE E

UniProtKB: Putative 60S ribosomal protein

+
Macromolecule #50: 60S ribosomal protein L32-like protein

MacromoleculeName: 60S ribosomal protein L32-like protein / type: protein_or_peptide / ID: 50 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 15.095985 KDa
SequenceString:
MVAAKKHVPI VKKRTKRFMR HQSDRFKCLD SAWRKPKGID NRVRRRFKGN LAMPSIGYGS NKKTKHMMPS GHKAFLVHNV KDVELLLMH NRTYAAEIAH NVSSRKRIDI ITRAKQLGVK VTNAKAKVTT EV

UniProtKB: 60S ribosomal protein L32-like protein

+
Macromolecule #51: 60S ribosomal protein l33-like protein

MacromoleculeName: 60S ribosomal protein l33-like protein / type: protein_or_peptide / ID: 51 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 12.330337 KDa
SequenceString:
MPSEAGHRLY VKGRHLSYQR GRRNTHPKTS LIKIEGVDDT AAANFYLGKR VAYVYRAQKE VRGTKIRVIW GKITRPHGNS GVVRAKFTH PLPARSFGAS VRIMLYPSSI

UniProtKB: 60S ribosomal protein l33-like protein

+
Macromolecule #52: Ribosomal protein l34-like protein

MacromoleculeName: Ribosomal protein l34-like protein / type: protein_or_peptide / ID: 52 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 13.492993 KDa
SequenceString:
MAPTRVTYRR RNPYNTTSNR TRVIKTPGGQ LRVLHIKKRG TAPKCGDCGI KLPGIPALRP REYATISKPK KTVQRAYGGS RCGNCVRDR IIRAFLIEEQ KIVKKVLKEQ SQAEKKASKK

UniProtKB: Ribosomal protein l34-like protein

+
Macromolecule #53: dolichyl-diphosphooligosaccharide--protein glycotransferase

MacromoleculeName: dolichyl-diphosphooligosaccharide--protein glycotransferase
type: protein_or_peptide / ID: 53 / Number of copies: 1 / Enantiomer: LEVO
EC number: dolichyl-diphosphooligosaccharide-protein glycotransferase
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 105.169227 KDa
SequenceString: MSSNGKVKAG QLWSKNKEEL TKILGELKTE LSQLRIQKIS SSGAKLNKIH DLRKSIARVL TVINAKQRAQ LRLFYKNKKY LPLDLRPKL TRALRRRLSK EDASRVLEKT KKRLTHFPQR KYAVKAATYS EGPALSIYHS HQREARCSLV QCCTFEPELR E SLLLLPVA ...String:
MSSNGKVKAG QLWSKNKEEL TKILGELKTE LSQLRIQKIS SSGAKLNKIH DLRKSIARVL TVINAKQRAQ LRLFYKNKKY LPLDLRPKL TRALRRRLSK EDASRVLEKT KKRLTHFPQR KYAVKAATYS EGPALSIYHS HQREARCSLV QCCTFEPELR E SLLLLPVA ASLKGPNFTR RERQHRNPSE ATMSAAEPLK LLASAGKGKS TRSVLRVAIL VLIAGAAVAS RLFSVIRFES II HEFDPWF NFRATKYLVA NGFYKFWDWF DDRTWHPLGR VTGGTLYPGL MVTSGVIYHL LRFLTVPVDI RNICVLLAPG FSG LTAIAA YLLTNEMTTS PSAGLLAAAF MGIAPGYISR SVAGSYDNEA IAIFLLVFTF FLWIKALKQG SMLWGALCAL FYGY MVASW GGYAFITCLL PLHSFVLICM GRYSTRLYVA YTTWYALGTL ASMQIPFVGF LPVKTSEHMP ALGIFGFLQL LAFLD YVRS TISSRQFQTF LWLFAGGIFG LGLLGLVIAT SAGLIAPWSG RFYSLWDTGY AKIHIPIIAS VSEHQPTAWP AFFFDL NML VWLFPVGVYL CFQQLGDEHV FIIVYALFGS YFAGVMVRLM LTLTPVVCVA AAIAFSSLLD TYLNLKTPNP GQAQATE DA GKKKSGLKAA SKPAVGVYAL WGKTMMISGL TIYLLLFVLH CTWVTSNAYS SPSVVLASRL PDGSQHIIDD YREAYQWL R QNTREDAKIM SWWDYGYQIG GMADRPTLVD NNTWNNTHIA TVGKAMASRE EVSYPIMRQH EVDYVLVVFG GLLGYSGDD INKFLWMVRI AEGIWPDEVS ERAFFTPRGE YRVDAEATDT MKNSLMYKMC YYNYNNLFPP GQAVDRMRGV RLPEVGPTLN TLEEAFTSE NWIIRIYKVK DLDNLGRDHA SAAAFERGHK KKKATKKRGP RVLRVE

UniProtKB: dolichyl-diphosphooligosaccharide--protein glycotransferase

+
Macromolecule #54: 60S ribosomal protein L36

MacromoleculeName: 60S ribosomal protein L36 / type: protein_or_peptide / ID: 54 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 12.784053 KDa
SequenceString:
MSEDATPKAP VERTGLIRGL NKGHKTTRRV LKERPSRRKG AQSKRTQFVR SLIREVAGLA PYERRVIELL RNGKDKRARK FSKKKLGTF GRAKRKCEEL QRIIAESRRA H

UniProtKB: 60S ribosomal protein L36

+
Macromolecule #55: Ribosomal protein L37

MacromoleculeName: Ribosomal protein L37 / type: protein_or_peptide / ID: 55 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 10.660455 KDa
SequenceString:
MTKGTSSFGK RHNKTHGLCR RCGRRSLHNQ KKVCASCGYP AAKTRKYNWS EKAKRRKVTG TGRMRYLSTV PRRFKNGFRT GVPKGARGP AVSTSS

UniProtKB: Ribosomal protein L37

+
Macromolecule #56: 60S ribosomal protein L38-like protein

MacromoleculeName: 60S ribosomal protein L38-like protein / type: protein_or_peptide / ID: 56 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 10.902031 KDa
SequenceString:
MPQEVSDIKK FIEICRRKDA SSKILTIAFP PPLTAARIKK NPKTQQIKFK VRCQRFLYTL VLKDSDKAEK LKQSLPPNLQ IKDVPKRNK RKSSA

UniProtKB: 60S ribosomal protein L38-like protein

+
Macromolecule #57: Ribosomal protein eL39

MacromoleculeName: Ribosomal protein eL39 / type: protein_or_peptide / ID: 57 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 6.297535 KDa
SequenceString:
MPSHKTFRIK QKLAKAQKQN RPIPQWIRLR TGNTIRYNAK RRHWRKTRLG L

UniProtKB: Large ribosomal subunit protein eL39

+
Macromolecule #58: 60S ribosomal protein L43-like protein

MacromoleculeName: 60S ribosomal protein L43-like protein / type: protein_or_peptide / ID: 58 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Thermochaetoides thermophila DSM 1495 (fungus)
Molecular weightTheoretical: 10.158977 KDa
SequenceString:
MSKRTKKVGI SGKYGTRYGA SLRKLVKKQE VTQHARYTCT FCGKNSVRRT AVGIWSCKSC KKTMAGGAYT VSTPAAAAMR STLRRLREI TEA

UniProtKB: 60S ribosomal protein L43-like protein

+
Macromolecule #59: GUANOSINE-5'-TRIPHOSPHATE

MacromoleculeName: GUANOSINE-5'-TRIPHOSPHATE / type: ligand / ID: 59 / Number of copies: 2 / Formula: GTP
Molecular weightTheoretical: 523.18 Da
Chemical component information

ChemComp-GTP:
GUANOSINE-5'-TRIPHOSPHATE / GTP, energy-carrying molecule*YM

+
Macromolecule #60: MAGNESIUM ION

MacromoleculeName: MAGNESIUM ION / type: ligand / ID: 60 / Number of copies: 3 / Formula: MG
Molecular weightTheoretical: 24.305 Da

+
Macromolecule #61: ZINC ION

MacromoleculeName: ZINC ION / type: ligand / ID: 61 / Number of copies: 5 / Formula: ZN
Molecular weightTheoretical: 65.409 Da

+
Macromolecule #62: water

MacromoleculeName: water / type: ligand / ID: 62 / Number of copies: 3 / Formula: HOH
Molecular weightTheoretical: 18.015 Da
Chemical component information

ChemComp-HOH:
WATER

-
Experimental details

-
Structure determination

Methodcryo EM
Processingsingle particle reconstruction
Aggregation stateparticle

-
Sample preparation

BufferpH: 7.5
VitrificationCryogen name: ETHANE

-
Electron microscopy

MicroscopeFEI TITAN KRIOS
Image recordingFilm or detector model: GATAN K2 SUMMIT (4k x 4k) / Detector mode: COUNTING / Average electron dose: 45.6 e/Å2
Electron beamAcceleration voltage: 300 kV / Electron source: FIELD EMISSION GUN
Electron opticsIllumination mode: SPOT SCAN / Imaging mode: BRIGHT FIELD / Nominal defocus max: 3.5 µm / Nominal defocus min: 0.5 µm
Experimental equipment
Model: Titan Krios / Image courtesy: FEI Company

-
Image processing

Startup modelType of model: NONE
Final reconstructionResolution.type: BY AUTHOR / Resolution: 2.12 Å / Resolution method: FSC 0.143 CUT-OFF
Details: Note: Values given relate to the consensus reconstruction
Number images used: 745895
Initial angle assignmentType: MAXIMUM LIKELIHOOD
Final angle assignmentType: MAXIMUM LIKELIHOOD

+
About Yorodumi

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jan 31, 2019. EMDB accession codes are about to change! (news from PDBe EMDB page)

EMDB accession codes are about to change! (news from PDBe EMDB page)

  • The allocation of 4 digits for EMDB accession codes will soon come to an end. Whilst these codes will remain in use, new EMDB accession codes will include an additional digit and will expand incrementally as the available range of codes is exhausted. The current 4-digit format prefixed with “EMD-” (i.e. EMD-XXXX) will advance to a 5-digit format (i.e. EMD-XXXXX), and so on. It is currently estimated that the 4-digit codes will be depleted around Spring 2019, at which point the 5-digit format will come into force.
  • The EM Navigator/Yorodumi systems omit the EMD- prefix.

Related info.:Q: What is EMD? / ID/Accession-code notation in Yorodumi/EM Navigator

External links:EMDB Accession Codes are Changing Soon! / Contact to PDBj

+
Jul 12, 2017. Major update of PDB

Major update of PDB

  • wwPDB released updated PDB data conforming to the new PDBx/mmCIF dictionary.
  • This is a major update changing the version number from 4 to 5, and with Remediation, in which all the entries are updated.
  • In this update, many items about electron microscopy experimental information are reorganized (e.g. em_software).
  • Now, EM Navigator and Yorodumi are based on the updated data.

External links:wwPDB Remediation / Enriched Model Files Conforming to OneDep Data Standards Now Available in the PDB FTP Archive

-
Yorodumi

Thousand views of thousand structures

  • Yorodumi is a browser for structure data from EMDB, PDB, SASBDB, etc.
  • This page is also the successor to EM Navigator detail page, and also detail information page/front-end page for Omokage search.
  • The word "yorodu" (or yorozu) is an old Japanese word meaning "ten thousand". "mi" (miru) is to see.

Related info.:EMDB / PDB / SASBDB / Comparison of 3 databanks / Yorodumi Search / Aug 31, 2016. New EM Navigator & Yorodumi / Yorodumi Papers / Jmol/JSmol / Function and homology information / Changes in new EM Navigator and Yorodumi

Read more