BIRD-PRD_900044: nystose

Basic information

• Entry: Database: Biologically Interesting Molecule Reference Dictionary (BIRD) / ID: PRD_900044
• Status: Status: REF ONLY
• Name: nystose

BIRD information

• Type: Oligosaccharide / Nutrient

Details

• oligosaccharide with reducing-end-to-reducing-end glycosidic bond

• Downloads: Molecular definition / Chemical definition

Chemical information

Composition

Formula: C₂₄H₄₂O₂₁ / Formula weight: 666.578

• Others: Type: saccharide

History

• External links: UniChem / ChemSpider / Wikipedia search / Google search

Details

SMILES

• CACTVS 3.385: OC[CH]1O[CH](O[C]2(CO[C]3(CO[C]4(CO)O[CH](CO)[CH](O)[CH]4O)O[CH](CO)[CH](O)[CH]3O)O[CH](CO)[CH](O)[CH]2O)[CH](O)[CH](O) [CH]1O
• OpenEye OEToolkits 2.0.7: C(C1C(C(C(C(O1)OC2(C(C(C(O2)CO)O)O)COC3(C(C(C(O3)CO)O)O)COC4(C(C(C(O4)CO)O)O)CO)O)O)O)O

SMILES CANONICAL

• CACTVS 3.385: OC[C@H]1O[C@H](O[C@]2(CO[C@]3(CO[C@]4(CO)O[C@H](CO)[C@@H](O)[C@@H]4O)O[C@H](CO)[C@@H](O)[C@@H]3O)O[C@H](CO)[C@@H](O)[C@ @H]2O)[C@H](O)[C@@H](O)[C@@H]1O
• OpenEye OEToolkits 2.0.7: C([C@@H]1[C@H]([C@@H]([C@H]([C@H](O1)O[C@]2([C@H]([C@@H]([C@H](O2)CO)O)O)CO[C@]3([C@H]([C@@H]([C@H](O3)CO)O)O)CO[C@]4([ C@H]([C@@H]([C@H](O4)CO)O)O)CO)O)O)O)O

SYSTEMATIC NAME

• OpenEye OEToolkits 2.0.7: (2~{R},3~{R},4~{S},5~{S},6~{R})-2-[(2~{S},3~{S},4~{S},5~{R})-2-[[(2~{R},3~{S},4~{S},5~{R})-2-[[(2~{R},3~{S},4~{S},5~{R} )-2,5-bis(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]oxymethyl]-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]oxymethy l]-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol #

PDB entries

Showing all 4 items

PDB-3lem:
Crystal structure of fructosyltransferase (D191A) from A. japonicus in complex with Nystose

PDB-5fmd:
Structure of D80A-fructofuranosidase from Xanthophyllomyces dendrorhous complexed with nystose

PDB-5g60:
S.pneumoniae ABC-transporter substrate binding protein FusA in complex with nystose

PDB-9j4j:
Crystal structure of GH9l Inulin fructotransferases(IFTase)incomplex with nystose(F3)