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Yorodumi- SASDCM2: Tandem CBD from Clostridium histolyticum ColG collagenase at pCa 4 -
+Open data
-Basic information
Entry | Database: SASBDB / ID: SASDCM2 |
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Sample | Tandem CBD from Clostridium histolyticum ColG collagenase at pCa 4
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Function / homology | Function and homology information tripeptidase activity / microbial collagenase / collagen metabolic process / collagen binding / metalloendopeptidase activity / endopeptidase activity / serine-type endopeptidase activity / calcium ion binding / zinc ion binding / extracellular region Similarity search - Function |
Biological species | Hathewaya histolytica (bacteria) |
Citation | Date: 2017 Aug Title: Structural Characterization of Bacterial Collagenases |
-Structure visualization
-Downloads & links
-Data source
SASBDB page | SASDCM2 |
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-Related structure data
Related structure data | SASDCL2 SASDCN2 SASDCP2 C: citing same article (ref.) |
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Similar structure data | Similarity search - Function & homologyF&H Search |
-Models
-Sample
Sample | Name: Tandem CBD from Clostridium histolyticum ColG collagenase at pCa 4 Specimen concentration: 1.00-5.00 |
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Buffer | Name: 10 mM HEPES 100 mM NaCL, 2% glycerol / pH: 7.5 / Comment: 0.2 mM EGTA pCa=4 |
Entity #610 | Name: tandem CBD / Type: protein / Description: Class1 collagenase collagen-binding domain / Formula weight: 27.055 / Num. of mol.: 1 / Source: Hathewaya histolytica / References: UniProt: Q9S0X0_CL Sequence: GSPGIPGTTT PITKEMEPND DIKEANGPIV EGVTVKGDLN GSDDADTFYF DVKEDGDVTI ELPYSGSSNF TWLVYKEGDD QNHIASGIDK NNSKVGTFKS TKGRHYVFIY KHDSASNISY SLNIKGLGNE KLKEKENNDS SDKATVIPNF NTTMQGSLLG DDSRDYYSFE ...Sequence: GSPGIPGTTT PITKEMEPND DIKEANGPIV EGVTVKGDLN GSDDADTFYF DVKEDGDVTI ELPYSGSSNF TWLVYKEGDD QNHIASGIDK NNSKVGTFKS TKGRHYVFIY KHDSASNISY SLNIKGLGNE KLKEKENNDS SDKATVIPNF NTTMQGSLLG DDSRDYYSFE VKEEGEVNIE LDKKDEFGVT WTLHPESNIN DRITYGQVDG NKVSNKVKLR PGKYYLLVYK YSGSGNYELR VNK |
-Experimental information
Beam | Instrument name: Advanced Light Source (ALS) 12.3.1 (SIBYLS) City: Berkeley, CA / 国: USA / Type of source: X-ray synchrotronSynchrotron / Wavelength: 0.1127 Å / Dist. spec. to detc.: 1.5 mm | |||||||||||||||||||||||||||||||||
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Detector | Name: Pilatus3 X 2M / Pixsize x: 172 mm | |||||||||||||||||||||||||||||||||
Scan | Title: Tandem CBD from Clostridium histolyticum ColG collagenase at pCa 4 Measurement date: Sep 14, 2015 / Storage temperature: 4 °C / Cell temperature: 10 °C / Unit: 1/A /
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Result | Type of curve: extrapolated /
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