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- SASDBK3: Bovine serum albumin, dimer from SEC-SAXS (Bovine serum albumin, ... -

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Basic information

Entry
Database: SASBDB / ID: SASDBK3
SampleBovine serum albumin, dimer from SEC-SAXS
  • Bovine serum albumin, dimer (protein), BSA dimer, Bos taurus
Function / homologyAlbumin domain signature. / Serum albumin, conserved site / Serum albumin family / Serum albumin/Alpha-fetoprotein/Afamin / Serum albumin-like / Albumin domain profile. / ALB/AFP/VDB / Serum albumin, N-terminal / maintenance of mitochondrion location / hemolysis by symbiont of host erythrocytes ...Albumin domain signature. / Serum albumin, conserved site / Serum albumin family / Serum albumin/Alpha-fetoprotein/Afamin / Serum albumin-like / Albumin domain profile. / ALB/AFP/VDB / Serum albumin, N-terminal / maintenance of mitochondrion location / hemolysis by symbiont of host erythrocytes / fatty acid binding / toxic substance binding / cellular response to starvation / pyridoxal phosphate binding / drug binding / negative regulation of apoptotic process / protein-containing complex / DNA binding / extracellular space / extracellular region / metal ion binding / Serum albumin
Function and homology information
SourceBos taurus (cattle)
CitationJournal: Nat Protoc / Year: 2016
Title: Preparing monodisperse macromolecular samples for successful biological small-angle X-ray and neutron-scattering experiments.
Authors: Cy M Jeffries / Melissa A Graewert / Clément E Blanchet / David B Langley / Andrew E Whitten / Dmitri I Svergun
Contact authorDmitri Svergun Melissa Clement Blanchet Cy M

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

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Models

Model #448
Type: atomic / Software: CRYSOL / Radius of dummy atoms: 1.90 A / Chi-square value: 1.044
Search similar-shape structures of this assembly by Omokage search (details)
Model #450
Type: dummy / Software: DAMMIF / Radius of dummy atoms: 3.60 A / Chi-square value: 1.104601 / P-value: 0.339000
Search similar-shape structures of this assembly by Omokage search (details)

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Sample

SampleName: Bovine serum albumin, dimer from SEC-SAXS / Entity id: 299
BufferName: Tris / Concentration: 25.00 mM / pH: 7.5 / Composition: 150 mM NaCl 3% v/v glycerol / Sample id: 268
Entity #299Name: , BSA dimer / Type: protein / Description: Bovine serum albumin, dimer / Formula weight: 66.462 / Number of molecules: 2 / Source: Bos taurus / References: UniProt: P02769
Sequence:
DTHKSEIAHR FKDLGEEHFK GLVLIAFSQY LQQCPFDEHV KLVNELTEFA KTCVADESHA GCEKSLHTLF GDELCKVASL RETYGDMADC CEKQEPERNE CFLSHKDDSP DLPKLKPDPN TLCDEFKADE KKFWGKYLYE IARRHPYFYA PELLYYANKY NGVFQECCQA EDKGACLLPK IETMREKVLT SSARQRLRCA SIQKFGERAL KAWSVARLSQ KFPKAEFVEV TKLVTDLTKV HKECCHGDLL ECADDRADLA KYICDNQDTI SSKLKECCDK PLLEKSHCIA EVEKDAIPEN LPPLTADFAE DKDVCKNYQE AKDAFLGSFL YEYSRRHPEY AVSVLLRLAK EYEATLEECC AKDDPHACYS TVFDKLKHLV DEPQNLIKQN CDQFEKLGEY GFQNALIVRY TRKVPQVSTP TLVEVSRSLG KVGTRCCTKP ESERMPCTED YLSLILNRLC VLHEKTPVSE KVTKCCTESL VNRRPCFSAL TPDETYVPKA FDEKLFTFHA DICTLPDTEK QIKKQTALVE LLKHKPKATE EQLKTVMENF VAFVDKCCAA DDKEACFAVE GPKLVVSTQT ALA

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Experimental information

BeamInstrument name: PETRA III P12 / Instrument city: Hamburg / Instrument country: Germany / Type of source: X-ray synchrotronSynchrotron / Radiation wavelength: 0.12 / Dist spec to detc: 3.1
DetectorName: Pilatus 2M
Scan
Title: Bovine serum albumin, dimer / Detc id: 4 / Measurement date: Jan 23, 2014 / Storage temperature: 2 / Exposure time: 1 / Number of frames: 3600 / Unit: 1/nm / Qmin: 0.0779 / Qmax: 3.4555 / Sample id: 268 / Result id: 306 / Beam id: 6
Distance distribution function P(R)
Intensity id: 306 / Software p of R: GNOM 4.6 / Number of points: 427 / Qmin: 0.07526 / Qmax: 3.441 / P of R point min: 21 / P of R point max: 447 / Rmin: 0 / Rmax: 12.71
Result
SASBDB code: SASDBK3 / Experimental MW: 133.6 / MW Porod: 125.9 / I0 from PR: 219.7 / I0 from PR error: 1.26 / I0 from Guinier: 217.8 / I0 from Guinier error: 1.32 / Rg from PR: 4.02 / Rg from PR error: 0.03 / Rg from Guinier: 3.89 / Rg from Guinier error: 0.06 / D max: 12.7 / Porod volume: 201.5 / Guinier point min: 1 / Guinier point max: 98 / Type of curve: other

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