+Open data
-Basic information
Entry | Database: SASBDB / ID: SASDBJ9 |
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Sample | Geobacillus stearothermophilus DnaB1-300
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Function / homology | DnaD domain / DnaD-like domain superfamily / Replication initiation and membrane attachment / Replication initiation and membrane attachment protein Function and homology information |
Biological species | Geobacillus stearothermophilus (bacteria) |
Citation | Date: 2017 Sep 22 Title: Structural analyses of the bacterial primosomal protein DnaB reveal that it is a tetramer and forms a complex with a primosomal re-initiation protein Authors: Li Y / Naveen V / Lin M |
Contact author |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Models
Model #1100 | Type: dummy / Radius of dummy atoms: 1.90 A / Chi-square value: 1.30 Search similar-shape structures of this assembly by Omokage search (details) |
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-Sample
Sample | Name: Geobacillus stearothermophilus DnaB1-300 / Specimen concentration: 10.00-18.00 |
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Buffer | Name: 20 mM Tris, 300 mM NaCl and 5 mM β-ME / pH: 8 |
Entity #566 | Name: GstDnaB1-300 / Type: protein / Description: Geobacillus stearothermophilus DnaB1-300 / Formula weight: 34.508 / Num. of mol.: 4 / Source: Geobacillus stearothermophilus / References: UniProt: A0A0K2H6I1 Sequence: MQHHWKELIA VDRYTVQSRG VLQEVDRKVL TLLYQPLIGC RALALYMTLW GELELLDGQE ATHHRLMALM QCGLPDIYSE RLKLEGIGLL DTYVHAKEAD EPKLFLYELR PPLAPDQFFR DEMLSVFLRR QVGRHLFIQL SNFFARPSID ETKFTQVTRS FSDVFSAVPA ...Sequence: MQHHWKELIA VDRYTVQSRG VLQEVDRKVL TLLYQPLIGC RALALYMTLW GELELLDGQE ATHHRLMALM QCGLPDIYSE RLKLEGIGLL DTYVHAKEAD EPKLFLYELR PPLAPDQFFR DEMLSVFLRR QVGRHLFIQL SNFFARPSID ETKFTQVTRS FSDVFSAVPA EQIVAGLSEE AGPELLEGKD HIRRDEASYV LDDGVFDFEL FFAGLSKQLV PRRAVTAKVK EAIKKLAFLY GIPPLEMQKL VLGVIDPAYH IDIDALRRAA REWYELEHGG VEPRLVERVQ PLAYRTMENI |
-Experimental information
Beam | Instrument name: Taiwan Photon Source 23A / City: NSRRC, Hsinchu / 国: Taiwan / Type of source: X-ray synchrotron / Wavelength: 0.08285 Å | |||||||||||||||||||||
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Detector | Name: Flat Panel sensor C10158DK-3957(X) / Pixsize x: 50 mm | |||||||||||||||||||||
Scan | Title: Geobacillus stearothermophilus DnaB1-300 / Measurement date: Oct 18, 2015 / Cell temperature: 15 °C / Exposure time: 30 sec. / Number of frames: 13 / Unit: 1/A /
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Distance distribution function P(R) | Sofotware P(R): GNOM 4.6 / Number of points: 244 /
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Result | D max: 11 / Type of curve: merged
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