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- ChemComp-QDK: L-ribulose -

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Basic information

EntryDatabase: PDB chemical components / ID: QDK
NameName: L-ribulose

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Chemical information

Composition
Formula: C5H10O5 / Number of atoms: 20 / Formula weight: 150.13 / Formal charge: 0
Others

3qdk

Type: L-saccharide / PDB classification: ATOMS / Three letter code: QDK / Ideal coordinates details: Corina / Model coordinates PDB-ID: 3QDK
History
Create componentJan 25, 2011
Modify descriptorJun 4, 2011
Modify atom idJun 24, 2020
External linksUniChem / ChemSpider / Wikipedia search / Google search

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

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Details

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SMILES

ACDLabs 12.01O=C(CO)C(O)C(O)CO
CACTVS 3.370OC[CH](O)[CH](O)C(=O)CO
OpenEye OEToolkits 1.7.0C(C(C(C(=O)CO)O)O)O

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SMILES CANONICAL

CACTVS 3.370OC[C@H](O)[C@H](O)C(=O)CO
OpenEye OEToolkits 1.7.0C([C@@H]([C@@H](C(=O)CO)O)O)O

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InChI

InChI 1.03InChI=1S/C5H10O5/c6-1-3(8)5(10)4(9)2-7/h3,5-8,10H,1-2H2/t3-,5-/m0/s1

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InChIKey

InChI 1.03ZAQJHHRNXZUBTE-UCORVYFPSA-N

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SYSTEMATIC NAME

ACDLabs 12.01L-ribulose
OpenEye OEToolkits 1.7.0(3S,4S)-1,3,4,5-tetrahydroxypentan-2-one

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PDB entries

Showing all 3 items

PDB-3qdk:
Structural insight on mechanism and diverse substrate selection strategy of ribulokinase

PDB-4q0q:
Crystal structure of Acinetobacter sp. DL28 L-ribose isomerase in complex with L-ribulose

PDB-4q0v:
Crystal structure of Acinetobacter sp. DL28 L-ribose isomerase mutant E204Q in complex with L-ribulose

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