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- ChemComp-HY3: 3-HYDROXYPROLINE -

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ID or keywords:

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Basic information

EntryDatabase: PDB chemical components / ID: HY3
NameName: 3-hydroxyproline / Synonyms: (2S,3S)-3-hydroxypyrrolidine-2-carboxylic acid

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Chemical information

Composition
Formula: C5H9NO3 / Number of atoms: 18 / Formula weight: 131.13 / Formal charge: 0
Others

2g66

PRO

Type: L-PEPTIDE LINKING / PDB classification: ATOMP / One letter code: P / Three letter code: HY3 / Ideal coordinates details: Corina / Model coordinates PDB-ID: 2G66 / Parent comp.: PRO
History
Create componentMar 22, 2006
Modify descriptorJun 4, 2011
Modify synonymsMar 13, 2021
Modify backboneNov 3, 2023
External linksUniChem / ChemSpider / BindingDB / Brenda / ChEBI / ChEMBL / ChemicalBook / HMDB / KEGG_Ligand / Metabolights / NMRShiftDB / Nikkaji / PubChem / PubChem_TPharma / Rhea / SureChEMBL / ZINC / Wikipedia search / Google search

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

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Details

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SMILES

ACDLabs 10.04O=C(O)C1NCCC1O
CACTVS 3.341O[CH]1CCN[CH]1C(O)=O
OpenEye OEToolkits 1.5.0C1CNC(C1O)C(=O)O

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SMILES CANONICAL

CACTVS 3.341O[C@H]1CCN[C@@H]1C(O)=O
OpenEye OEToolkits 1.5.0C1CN[C@@H]([C@H]1O)C(=O)O

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InChI

InChI 1.03InChI=1S/C5H9NO3/c7-3-1-2-6-4(3)5(8)9/h3-4,6-7H,1-2H2,(H,8,9)/t3-,4-/m0/s1

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InChIKey

InChI 1.03BJBUEDPLEOHJGE-IMJSIDKUSA-N

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SYSTEMATIC NAME

ACDLabs 10.04(3S)-3-hydroxy-L-proline
OpenEye OEToolkits 1.5.0(2S,3S)-3-hydroxypyrrolidine-2-carboxylic acid

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PDB entries

Showing all 3 items

PDB-6r77:
Crystal structure of trans-3-Hydroxy-L-proline dehydratase in complex with substrate - closed conformation

PDB-7e09:
Trans-3/4-proline-hydroxylase H11 with 3-hydroxyl-proline

PDB-8h85:
Trans-3/4-proline-hydroxylase H11 with 3-hydroxyl-proline

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