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- ChemComp-GAO: GUANINE ARABINOSE-5'-PHOSPHATE -

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Basic information

EntryDatabase: PDB chemical components / ID: GAO
NameName: guanine arabinose-5'-phosphate

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Chemical information

Composition
Formula: C10H14N5O8P / Number of atoms: 38 / Formula weight: 363.221 / Formal charge: 0
Others

1ho6

G

Type: RNA LINKING / PDB classification: ATOMN / One letter code: G / Three letter code: GAO / Model coordinates PDB-ID: 1HO6 / Parent comp.: G
History
Create componentDec 18, 2000
Modify descriptorJun 4, 2011
External linksUniChem / ChemSpider / Wikipedia search / Google search

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

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Details

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SMILES

ACDLabs 10.04O=C1c2ncn(c2N=C(N)N1)C3OC(C(O)C3O)COP(=O)(O)O
CACTVS 3.341NC1=Nc2n(cnc2C(=O)N1)[CH]3O[CH](CO[P](O)(O)=O)[CH](O)[CH]3O
OpenEye OEToolkits 1.5.0c1nc2c(n1C3C(C(C(O3)COP(=O)(O)O)O)O)N=C(NC2=O)N

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SMILES CANONICAL

CACTVS 3.341NC1=Nc2n(cnc2C(=O)N1)[C@@H]3O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@@H]3O
OpenEye OEToolkits 1.5.0c1nc2c(n1[C@H]3[C@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O)N=C(NC2=O)N

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InChI

InChI 1.03InChI=1S/C10H14N5O8P/c11-10-13-7-4(8(18)14-10)12-2-15(7)9-6(17)5(16)3(23-9)1-22-24(19,20)21/h2-3,5-6,9,16-17H,1H2,(H2,19,20,21)(H3,11,13,14,18)/t3-,5-,6+,9-/m1/s1

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InChIKey

InChI 1.03RQFCJASXJCIDSX-FJFJXFQQSA-N

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SYSTEMATIC NAME

ACDLabs 10.042-amino-9-(5-O-phosphono-beta-D-arabinofuranosyl)-1,9-dihydro-6H-purin-6-one
OpenEye OEToolkits 1.5.0[(2R,3S,4S,5R)-5-(2-amino-6-oxo-1H-purin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl dihydrogen phosphate

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PDB entries

Showing all 1 items

PDB-7lne:
ANA modification at 3' end of RNA primer complex with guanosine dinucleotide ligand G(5')ppp(5')G

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