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- EMDB-66373: The PSI-ACPI supercomplex from the cryptophyte Chroomonas placoidea -

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Basic information

Entry
Database: EMDB / ID: EMD-66373
TitleThe PSI-ACPI supercomplex from the cryptophyte Chroomonas placoidea
Map data
Sample
  • Complex: Structure of PSI-ACPI supercomplex from cryptophyte algae
    • Protein or peptide: x 28 types
  • Ligand: x 12 types
KeywordsPHOTOSYNTHESIS / STRUCTURAL PROTEIN
Function / homology
Function and homology information


plastid thylakoid membrane / thylakoid membrane / photosystem I reaction center / photosystem I / photosynthetic electron transport in photosystem I / photosystem I / plastid / chlorophyll binding / chloroplast thylakoid membrane / photosynthesis ...plastid thylakoid membrane / thylakoid membrane / photosystem I reaction center / photosystem I / photosynthetic electron transport in photosystem I / photosystem I / plastid / chlorophyll binding / chloroplast thylakoid membrane / photosynthesis / 4 iron, 4 sulfur cluster binding / oxidoreductase activity / electron transfer activity / magnesium ion binding / metal ion binding
Similarity search - Function
Photosystem I reaction center subunit PsaK / Photosystem I reaction centre subunit PsaK / Photosystem I PsaM, reaction centre superfamily / Photosystem I PsaM, reaction centre / Photosystem I protein M (PsaM) / Photosystem I reaction centre subunit PsaK superfamily / Photosystem I psaG and psaK proteins signature. / Photosystem I reaction center subunit V/PsaK / Photosystem I psaG / psaK / Photosystem I PsaL, reaction centre subunit XI ...Photosystem I reaction center subunit PsaK / Photosystem I reaction centre subunit PsaK / Photosystem I PsaM, reaction centre superfamily / Photosystem I PsaM, reaction centre / Photosystem I protein M (PsaM) / Photosystem I reaction centre subunit PsaK superfamily / Photosystem I psaG and psaK proteins signature. / Photosystem I reaction center subunit V/PsaK / Photosystem I psaG / psaK / Photosystem I PsaL, reaction centre subunit XI / Photosystem I, reaction centre subunit XI / Photosystem I PsaL, reaction centre subunit XI superfamily / Photosystem I reaction centre subunit XI / Photosystem I reaction centre subunit VIII / Photosystem I reaction centre subunit VIII / Photosystem I reaction centre subunit VIII superfamily / Photosystem I PsaF, reaction centre subunit III / Photosystem I PsaF, reaction centre subunit III superfamily / Photosystem I reaction centre subunit III / Photosystem I PsaD / Photosystem I, reaction centre subunit PsaD superfamily / PsaD / Photosystem I PsaE, reaction centre subunit IV / Photosystem I PsaJ, reaction centre subunit IX superfamily / Photosystem I reaction centre subunit IV / PsaE / Photosystem I PsaJ, reaction centre subunit IX / Photosystem I reaction centre subunit IX / PsaJ / Photosystem I protein PsaC / Photosystem I PsaA / Photosystem I PsaB / Photosystem I PsaA/PsaB, conserved site / Photosystem I psaA and psaB proteins signature. / : / Photosystem I PsaA/PsaB / Photosystem I PsaA/PsaB superfamily / Photosystem I psaA/psaB protein / Electron transport accessory-like domain superfamily / 4Fe-4S dicluster domain / 4Fe-4S ferredoxin, iron-sulphur binding, conserved site / 4Fe-4S ferredoxin-type iron-sulfur binding region signature. / 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. / 4Fe-4S ferredoxin-type, iron-sulphur binding domain
Similarity search - Domain/homology
Photosystem I iron-sulfur center / Photosystem I reaction center subunit XII / Photosystem I reaction center subunit PsaK / Photosystem I reaction center subunit III / Photosystem I reaction center subunit IX / Photosystem I reaction center subunit XI / Photosystem I reaction center subunit VIII / Photosystem I P700 chlorophyll a apoprotein A2 / Photosystem I reaction center subunit II / Photosystem I P700 chlorophyll a apoprotein A1 / Photosystem I reaction center subunit IV
Similarity search - Component
Biological speciesChroomonas placoidea (eukaryote)
Methodsingle particle reconstruction / cryo EM / Resolution: 2.25 Å
AuthorsLi XY / Mao ZY / Han GY
Funding support China, 1 items
OrganizationGrant numberCountry
Ministry of Science and Technology (MoST, China)2022YFA0911900 China
CitationJournal: Photosynth Res / Year: 2025
Title: Structural insights into a PSI-ACPI supercomplex from a cryptophyte alga Chroomonas placoidea.
Authors: Xingyue Li / Zhiyuan Mao / Zhenhua Li / Liangliang Shen / Xiaoyi Li / Yanyan Yang / Wenda Wang / Tingyun Kuang / Jian-Ren Shen / Guangye Han /
History
DepositionSep 27, 2025-
Header (metadata) releaseJan 7, 2026-
Map releaseJan 7, 2026-
UpdateJan 7, 2026-
Current statusJan 7, 2026Processing site: PDBc / Status: Released

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Structure visualization

Supplemental images

emd_66373.png

Downloads & links

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Map

FileDownload / File: emd_66373.map.gz / Format: CCP4 / Size: 512 MB / Type: IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)
Projections & slices

Image control

Size
Brightness
Contrast
Others
AxesZ (Sec.)Y (Row.)X (Col.)
1.04 Å/pix.
x 512 pix.
= 532.48 Å		1.04 Å/pix.
x 512 pix.
= 532.48 Å		1.04 Å/pix.
x 512 pix.
= 532.48 Å

Surface

Projections

Slices (1/3)

Slices (1/2)

Slices (2/3)

Images are generated by Spider.

Voxel sizeX=Y=Z: 1.04 Å
Density

Histogram

Histogram (log scale)
Contour LevelBy AUTHOR: 0.1
Minimum - Maximum-0.18963195 - 0.7088272
Average (Standard dev.)0.00039833688 (±0.012881332)
SymmetrySpace group: 1
Details

EMDB XML:

Map geometry
Axis orderXYZ
Origin000
Dimensions512512512
Spacing512512512
CellA=B=C: 532.48 Å
α=β=γ: 90.0 °

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Supplemental data

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Half map: #2

Fileemd_66373_half_map_1.map
Projections & Slices
AxesZYX

Projections

Slices (1/2)
Density Histograms

Histogram

Histogram (log scale)

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Half map: #1

Fileemd_66373_half_map_2.map
Projections & Slices
AxesZYX

Projections

Slices (1/2)
Density Histograms

Histogram

Histogram (log scale)

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Sample components

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Entire : Structure of PSI-ACPI supercomplex from cryptophyte algae

EntireName: Structure of PSI-ACPI supercomplex from cryptophyte algae
Components
  • Complex: Structure of PSI-ACPI supercomplex from cryptophyte algae
    • Protein or peptide: ACPI-1
    • Protein or peptide: ACPI-2
    • Protein or peptide: ACPI-3
    • Protein or peptide: ACPI-4
    • Protein or peptide: ACPI-5
    • Protein or peptide: ACPI-6
    • Protein or peptide: ACPI-7
    • Protein or peptide: ACPI-8
    • Protein or peptide: ACPI-12
    • Protein or peptide: Photosystem I P700 chlorophyll a apoprotein A1
    • Protein or peptide: Photosystem I P700 chlorophyll a apoprotein A2
    • Protein or peptide: Photosystem I iron-sulfur center
    • Protein or peptide: Photosystem I reaction center subunit II
    • Protein or peptide: Photosystem I reaction center subunit IV
    • Protein or peptide: Photosystem I reaction center subunit III
    • Protein or peptide: Photosystem I reaction center subunit VIII
    • Protein or peptide: Photosystem I reaction center subunit IX
    • Protein or peptide: Photosystem I reaction center subunit PsaK
    • Protein or peptide: Photosystem I reaction center subunit XI
    • Protein or peptide: Photosystem I reaction center subunit XII
    • Protein or peptide: PsaO
    • Protein or peptide: PsaR
    • Protein or peptide: CCPI-S
    • Protein or peptide: ACPI-13/10
    • Protein or peptide: ACPI-14
    • Protein or peptide: ACPI-9
    • Protein or peptide: ACPI-11
    • Protein or peptide: PsaQ
  • Ligand: CHLOROPHYLL A
  • Ligand: Chlorophyll c2
  • Ligand: (1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E})-3,7,12,16-tetramethyl-18-[(4~{R})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-3,5,7,9,11,13,15-heptaen-1,17-diynyl]cyclohex-3-en-1-ol
  • Ligand: (1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(1~{R},4~{R})-2,6,6-trimethyl-4-oxidanyl-cyclohex-2-en-1-yl]octadeca-3,5,7,9,11,13,15,17-octaen-1-ynyl]cyclohex-3-en-1-ol
  • Ligand: (1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-(2,6,6-trimethylcyclohexen-1-yl)octadeca-3,5,7,9,11,13,15,17-octaen-1-ynyl]cyclohex-3-en-1-ol
  • Ligand: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
  • Ligand: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
  • Ligand: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
  • Ligand: (6'R,11cis,11'cis,13cis,15cis)-4',5'-didehydro-5',6'-dihydro-beta,beta-carotene
  • Ligand: DIGALACTOSYL DIACYL GLYCEROL (DGDG)
  • Ligand: IRON/SULFUR CLUSTER
  • Ligand: PHYLLOQUINONE

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Supramolecule #1: Structure of PSI-ACPI supercomplex from cryptophyte algae

SupramoleculeName: Structure of PSI-ACPI supercomplex from cryptophyte algae
type: complex / ID: 1 / Parent: 0 / Macromolecule list: #1-#28
Source (natural)Organism: Chroomonas placoidea (eukaryote)

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Macromolecule #1: ACPI-1

MacromoleculeName: ACPI-1 / type: protein_or_peptide / ID: 1 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chroomonas placoidea (eukaryote)
Molecular weightTheoretical: 23.479367 KDa
SequenceString: MLRLSLLAAI VACASAFAPT SLPMGSMRKA ATKGPSMQLF GAGKLQGEGV TAIPFAGRPK TPAFDGTWAG DTGFDPLTIS AWLDIRFLR EAELKHCRVA MLAAAGAIAQ DAFTFPGTVE TFGTGKMTAL HDAAVKTGTM GQMLVWIGFA EIFSTAAILQ W YTDGSTRK ...String:
MLRLSLLAAI VACASAFAPT SLPMGSMRKA ATKGPSMQLF GAGKLQGEGV TAIPFAGRPK TPAFDGTWAG DTGFDPLTIS AWLDIRFLR EAELKHCRVA MLAAAGAIAQ DAFTFPGTVE TFGTGKMTAL HDAAVKTGTM GQMLVWIGFA EIFSTAAILQ W YTDGSTRK PGDFGFDPLG FSKGKDAARL ELCELKNGRL AMIAIGGMIH HYLITGKGPL ELLP

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Macromolecule #2: ACPI-2

MacromoleculeName: ACPI-2 / type: protein_or_peptide / ID: 2 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chroomonas placoidea (eukaryote)
Molecular weightTheoretical: 23.400123 KDa
SequenceString: MLRVALIAAI LASASAFAPM GSLGLVKSAR SGAAISPRMQ SGDFSAAVPF LKRPSNLDGT LAGDVGFDPL GFSDVFDLRV LREAELKHG RFAMLAVLGF LVQEVYTFPF FPKMAPVDAH DYFVTQGGGS QIIFWISFVE IFGVVALFEL IQGKRDAGDF A FDPLGLGK ...String:
MLRVALIAAI LASASAFAPM GSLGLVKSAR SGAAISPRMQ SGDFSAAVPF LKRPSNLDGT LAGDVGFDPL GFSDVFDLRV LREAELKHG RFAMLAVLGF LVQEVYTFPF FPKMAPVDAH DYFVTQGGGS QIIFWISFVE IFGVVALFEL IQGKRDAGDF A FDPLGLGK DEATLARYKV AEIKHARLAM IAIGGFIHQF WVTKQTVLEQ LGNFQSLA

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Macromolecule #3: ACPI-3

MacromoleculeName: ACPI-3 / type: protein_or_peptide / ID: 3 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chroomonas placoidea (eukaryote)
Molecular weightTheoretical: 24.853104 KDa
SequenceString: MLRTLALLAA VASASAFTAA PMLSTSTRAK AVSSVSGMRM QEKSASVPFL SKPEKLDGSM AGDVGFDPLG ISYFIDVKWL REAELKHGR ICMLATAGIL VQEVIHLPGP AFSSKFALDA WSTAPRGGMV QILIAIGLIE MVSNRFAITA TDMFANPNRK P GDLGFDPL ...String:
MLRTLALLAA VASASAFTAA PMLSTSTRAK AVSSVSGMRM QEKSASVPFL SKPEKLDGSM AGDVGFDPLG ISYFIDVKWL REAELKHGR ICMLATAGIL VQEVIHLPGP AFSSKFALDA WSTAPRGGMV QILIAIGLIE MVSNRFAITA TDMFANPNRK P GDLGFDPL SLGANPATRA KYELSEVIHG RAAMMGLSGM IHQMIVSKQP VIDQLLNFKP VDASFKLGGA AGTMGMG

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Macromolecule #4: ACPI-4

MacromoleculeName: ACPI-4 / type: protein_or_peptide / ID: 4 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chroomonas placoidea (eukaryote)
Molecular weightTheoretical: 23.548246 KDa
SequenceString: MLRSLALLCL VGAASAFAPG AAPLVRSNTR AAIARGPRMQ EMSKAIPFAE RPAKLDGKIP GDVGFDPLGF SDYYDLKYLR EAEIKHGRI CMLGALGWLF PEFAKLPQFA SLSTNPLKAA TELGPAGWAQ IFIFVGALES FSYEKIYYGD SAPGDLGFDP L RLGKNPVS ...String:
MLRSLALLCL VGAASAFAPG AAPLVRSNTR AAIARGPRMQ EMSKAIPFAE RPAKLDGKIP GDVGFDPLGF SDYYDLKYLR EAEIKHGRI CMLGALGWLF PEFAKLPQFA SLSTNPLKAA TELGPAGWAQ IFIFVGALES FSYEKIYYGD SAPGDLGFDP L RLGKNPVS RAHYEVAEIK NGRLAMIGLG GMIHHSLLTK QGAIEQIMSQ NFYPSGFPQ

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Macromolecule #5: ACPI-5

MacromoleculeName: ACPI-5 / type: protein_or_peptide / ID: 5 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chroomonas placoidea (eukaryote)
Molecular weightTheoretical: 24.055031 KDa
SequenceString: MLRLSLLAAC IAAASAFAPV ALPGMGMRAA TRRPAVSMQL WEDGKVQGKG LKAIPFSDPP ESLPSDMVGY VGFDPLGFST LFDIKFLRE AELKHGRAAM LAAAGAIAQD IFTFPGVTSV IGDAKMTGAH DAFLKAAADG NPKANAMSQL FVWIGFFELV S MPALFETL ...String:
MLRLSLLAAC IAAASAFAPV ALPGMGMRAA TRRPAVSMQL WEDGKVQGKG LKAIPFSDPP ESLPSDMVGY VGFDPLGFST LFDIKFLRE AELKHGRAAM LAAAGAIAQD IFTFPGVTSV IGDAKMTGAH DAFLKAAADG NPKANAMSQL FVWIGFFELV S MPALFETL NGGERAPGDF YFDPLGLGKG SGRARMELAE IKNGRLAMIG IGGMVHHYLL TGKGPIGTIV G

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Macromolecule #6: ACPI-6

MacromoleculeName: ACPI-6 / type: protein_or_peptide / ID: 6 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chroomonas placoidea (eukaryote)
Molecular weightTheoretical: 22.688564 KDa
SequenceString: MLRVALISAL VASASAFAPT ALPAARASAR AVSAGPKMQM SPSVPFLKRP VALDGSMVGD VGFDPLGLSS VGDIKFLREA ELKHCRLAM LAAAGSMAQD LYTFPGVDKV IGDAKMTAVH DKLVSQGAMG QLLVWIGFAE VFATMALFET LDGKRAPGDF K FDPLGFGK ...String:
MLRVALISAL VASASAFAPT ALPAARASAR AVSAGPKMQM SPSVPFLKRP VALDGSMVGD VGFDPLGLSS VGDIKFLREA ELKHCRLAM LAAAGSMAQD LYTFPGVDKV IGDAKMTAVH DKLVSQGAMG QLLVWIGFAE VFATMALFET LDGKRAPGDF K FDPLGFGK NPEALKRYQL AEIKNGRLAM LGFGGMVHGY FVTGKGPLEL LTNFQAA

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Macromolecule #7: ACPI-7

MacromoleculeName: ACPI-7 / type: protein_or_peptide / ID: 7 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chroomonas placoidea (eukaryote)
Molecular weightTheoretical: 24.550402 KDa
SequenceString: MLRVALLSAL VASAAAFTAP AALFKAPTRS SRAMSVKMQD NSAAVPFLSR PAALDGSMVG DVGFDPLGFT GKYDLKWLRE AELKHGRVA MLASLGCLVQ EFIHLPFEAT SNPVASEAFF QVPSGGLWQI FTVIGVIEHV SNGFNMSGST MFKSGRAPGN L GFDPLNFG ...String:
MLRVALLSAL VASAAAFTAP AALFKAPTRS SRAMSVKMQD NSAAVPFLSR PAALDGSMVG DVGFDPLGFT GKYDLKWLRE AELKHGRVA MLASLGCLVQ EFIHLPFEAT SNPVASEAFF QVPSGGLWQI FTVIGVIEHV SNGFNMSGST MFKSGRAPGN L GFDPLNFG KNPTARARYE LAELKNGRLA MLGFAGMIHG CFITGKGPLA ALTSLDWHQQ IGRASCRERV GC

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Macromolecule #8: ACPI-8

MacromoleculeName: ACPI-8 / type: protein_or_peptide / ID: 8 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chroomonas placoidea (eukaryote)
Molecular weightTheoretical: 23.700525 KDa
SequenceString: MFARTLLLAA CAASASAFAP GSFAPMGLRG STAAVSRPMA RAGLSSVSMA ANPMTNAIEE FAESAPELAS RGLGVTTNAE RWNGRHAMF GIFAIVMTAY FKGHGLIPDA EKILDVNQWG PLASAGQGQG ITNERAIILI AHVHVLVVSV LAAFAPFQFQ D TLVKEKGY ...String:
MFARTLLLAA CAASASAFAP GSFAPMGLRG STAAVSRPMA RAGLSSVSMA ANPMTNAIEE FAESAPELAS RGLGVTTNAE RWNGRHAMF GIFAIVMTAY FKGHGLIPDA EKILDVNQWG PLASAGQGQG ITNERAIILI AHVHVLVVSV LAAFAPFQFQ D TLVKEKGY TPEAPAGIIP PFKTGLTPEA ELINGRLAML GVISIIMASI FTGNSVIDVV NLGLGKILF

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Macromolecule #9: ACPI-12

MacromoleculeName: ACPI-12 / type: protein_or_peptide / ID: 9 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chroomonas placoidea (eukaryote)
Molecular weightTheoretical: 23.223098 KDa
SequenceString: MFRALLVLAA VAGASAFTAP AVLPGRSTAR AATKGPSMQL YKEGSLQGKG VNCIPIFKRP DSLKGDAVGD MGFDPFGFSS WVDMNYVRE AEIKHGRIAM LAFAGIVVEV LGIKAPGAGK ILGSSTDIFE IHNAAVEKGS MGQILLWCGF FEMTAGLPAM Q QMLEGSGR ...String:
MFRALLVLAA VAGASAFTAP AVLPGRSTAR AATKGPSMQL YKEGSLQGKG VNCIPIFKRP DSLKGDAVGD MGFDPFGFSS WVDMNYVRE AEIKHGRIAM LAFAGIVVEV LGIKAPGAGK ILGSSTDIFE IHNAAVEKGS MGQILLWCGF FEMTAGLPAM Q QMLEGSGR TPGDFGFDPL GLGKKDFAQM QIKEIQNGRL AMLAVSGMVH HALINGKVQG LP

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Macromolecule #10: Photosystem I P700 chlorophyll a apoprotein A1

MacromoleculeName: Photosystem I P700 chlorophyll a apoprotein A1 / type: protein_or_peptide / ID: 10 / Number of copies: 1 / Enantiomer: LEVO / EC number: photosystem I
Source (natural)Organism: Chroomonas placoidea (eukaryote)
Molecular weightTheoretical: 83.49357 KDa
SequenceString: MTVSSTEQEA KKVSITVDKD PVATSFEKWA QPGHFSRTLA KGPKTTTWIW NLHADAHDFD SHTSSLEDIS RKIFSAHFGQ LSIIFLWLS GMYFHGARFS NYSAWLSNPT AVKPSAQVVW PIVGQEVLNG DVGGGFQGVQ ITSGFFQIWR ASGITSEVEL Y WCALAGLL ...String:
MTVSSTEQEA KKVSITVDKD PVATSFEKWA QPGHFSRTLA KGPKTTTWIW NLHADAHDFD SHTSSLEDIS RKIFSAHFGQ LSIIFLWLS GMYFHGARFS NYSAWLSNPT AVKPSAQVVW PIVGQEVLNG DVGGGFQGVQ ITSGFFQIWR ASGITSEVEL Y WCALAGLL MSGLMIFAGW FHYHKAAPKL EWFQNAESML NHHLSGLLGL GCLSWAGHQI HVSLPINKLL DAGVAPQEIP LP HEFLVNR DLMAQLYPSF SKGLVPFFTL NWSEYSDFLT FKGGLNPVTG GLWLSDTAHH HLALAVLFIV AGHMYRTNWG IGH SMKEIL EAHKGPFTGE GHKGLYEVLI TSWHAQLSIN LAMLGSLSII IAHHMYAMPP YPYIATDYPT QLSLFTHHMW IGGF CVCGA AAHAGIFMVR DYNPAQNYNN LLDRVIRHRD AIISHLNWIC IFLGFHSFGL YIHNDTMRAL GRTQDMFSDT AIQLK PVFA QWVQNIHTVA PGNTTPNALA TASYAFGGNV VSVGNKVAMM PISLGTADFM VHHIHAFTIH VTVLILLKGV LFSRNS RLI PDKANLGFRF PCDGPGRGGT CQSSAWDSVF LGLFWMYNCI SVVIFHFSWK MQSDVWGTVQ ADNTVTHITG GNFAQSA IT INGWLRDFLW AQASQVIQSY GSSLSAYGLI FLGAHFIWAF SLMFLFSGRG YWQELIESVV WAHNKLNFAP AIQPRALS I TQGRAVGLAH YLLGGIGTTW AFFLARIISV G

UniProtKB: Photosystem I P700 chlorophyll a apoprotein A1

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Macromolecule #11: Photosystem I P700 chlorophyll a apoprotein A2

MacromoleculeName: Photosystem I P700 chlorophyll a apoprotein A2 / type: protein_or_peptide / ID: 11 / Number of copies: 1 / Enantiomer: LEVO / EC number: photosystem I
Source (natural)Organism: Chroomonas placoidea (eukaryote)
Molecular weightTheoretical: 82.21982 KDa
SequenceString: MATKFPKFSQ ALAQDPATRR IWYGLATAHD FESHDGMTEE NLYQKIFASH FGHLAIIFLW TSGNLFHVAW QGNFEQWVLN PLKVKPVAH AIWDPHFGQP AVKAFTKGGV FYPVNIATSG VYHWWYTIGM RTNNDLYAGS LFLLFLSGVF LFAGWLHLQP K FRPGLSWF ...String:
MATKFPKFSQ ALAQDPATRR IWYGLATAHD FESHDGMTEE NLYQKIFASH FGHLAIIFLW TSGNLFHVAW QGNFEQWVLN PLKVKPVAH AIWDPHFGQP AVKAFTKGGV FYPVNIATSG VYHWWYTIGM RTNNDLYAGS LFLLFLSGVF LFAGWLHLQP K FRPGLSWF KNNESRLNHH LSGLFGFSSL AWAGHLIHIA IPEARGQHVG WDNFTKTLPH PAGLTPFFTG NWSLYADNPD TA NHIFGTS EGSGSAILTF LGGFHPQTQA LWLTDIAHHH LAIGVVFIFA GHMYRTNWGI GHSLKEILDA HRPPGGRLGA GHK GLFETI TNSLHFQLGL ALASIGVITS LVAQHMYALP AYAFIAKDYT TQAALYTHHQ YIAGFLMVGA FAHGAIFFVR DYDP EQNKN NVLARMLEHK EAIISHLSWV SLFLGFHTLG LYIHNDVVVA FGTPEKQILV EPVFAQWIQA SSGKALYGFD VLLSS SNSV ATNASNNIWL PGWLDAINSG KNSLFLPIGP GDFLVHHAIA LGLHTTALIL VKGALDARGS KLMPDKKDFG YSFPCD GPG RGGTCDISAW DAFYLSMFWM LNTIGWVTFY WHWKHVTIWQ GNAGQFNESS TYIMGWLRDY LWLNSSPLIN GYNPFGM NS LAVWAWMFLF GHLIWATGFM FLISWRGYWQ ELIETLAWAH ERTPLANLVR WKDKPVALSI VQARLVGLIH FTVGYVFT Y AAFVIASTTG KFG

UniProtKB: Photosystem I P700 chlorophyll a apoprotein A2

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Macromolecule #12: Photosystem I iron-sulfur center

MacromoleculeName: Photosystem I iron-sulfur center / type: protein_or_peptide / ID: 12 / Number of copies: 1 / Enantiomer: LEVO / EC number: photosystem I
Source (natural)Organism: Chroomonas placoidea (eukaryote)
Molecular weightTheoretical: 8.743131 KDa
SequenceString:
MSHAVKVYDT CIGCTQCVRA CPCDVLEMVS WDGCKAGQIA SAPRTEDCIG CKRCETACPT DFLSVRVYLG GETTRSMGLA Y

UniProtKB: Photosystem I iron-sulfur center

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Macromolecule #13: Photosystem I reaction center subunit II

MacromoleculeName: Photosystem I reaction center subunit II / type: protein_or_peptide / ID: 13 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chroomonas placoidea (eukaryote)
Molecular weightTheoretical: 15.590765 KDa
SequenceString:
MSETLNLQIP SPTFEGSTGG WLRAAEVEEK YAITWTSGKE QVFEMPTGGA AIMRKGENLL YLARKEQCLA LGTQLKTGFK ITDYKIYRI FPSGEVQYLH PKDGVFPEKV NAGRIGVGNV SHSIGKNLNP SQIKFTNKSF NG

UniProtKB: Photosystem I reaction center subunit II

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Macromolecule #14: Photosystem I reaction center subunit IV

MacromoleculeName: Photosystem I reaction center subunit IV / type: protein_or_peptide / ID: 14 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chroomonas placoidea (eukaryote)
Molecular weightTheoretical: 7.352387 KDa
SequenceString:
MVKRGSQVRI LRKESYWYQD VGTVATIDTS GIRYPVVVRF EKVSYSGVNT NNFSLDEVVE VVKK

UniProtKB: Photosystem I reaction center subunit IV

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Macromolecule #15: Photosystem I reaction center subunit III

MacromoleculeName: Photosystem I reaction center subunit III / type: protein_or_peptide / ID: 15 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chroomonas placoidea (eukaryote)
Molecular weightTheoretical: 20.393484 KDa
SequenceString:
MKNWVSLVLI FSIVTTPYVA HADVAGLTPC KDSKDFQRRL DGSVKKLKTR LAKYEKGTPP ALALEKQIER TQARFERYGK AGLLCGTDG LPHLITDGRW SHSGEFVIPG LFFLYIAGWI GWVGRSYVLF ARESDKPTEK EIILDVPAAL SFVSTGFIWP V SAFKEFTS GNLIADESEI TVSPR

UniProtKB: Photosystem I reaction center subunit III

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Macromolecule #16: Photosystem I reaction center subunit VIII

MacromoleculeName: Photosystem I reaction center subunit VIII / type: protein_or_peptide / ID: 16 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chroomonas placoidea (eukaryote)
Molecular weightTheoretical: 3.975751 KDa
SequenceString:
MTAAYLPSIL VPLIGLIFPG FVMGFAFIYI EQEEIA

UniProtKB: Photosystem I reaction center subunit VIII

+
Macromolecule #17: Photosystem I reaction center subunit IX

MacromoleculeName: Photosystem I reaction center subunit IX / type: protein_or_peptide / ID: 17 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chroomonas placoidea (eukaryote)
Molecular weightTheoretical: 4.862727 KDa
SequenceString:
MDSNFLKYLS TAPVLLTVWL SFTAGLVIEA NRFFPDMLYF PM

UniProtKB: Photosystem I reaction center subunit IX

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Macromolecule #18: Photosystem I reaction center subunit PsaK

MacromoleculeName: Photosystem I reaction center subunit PsaK / type: protein_or_peptide / ID: 18 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chroomonas placoidea (eukaryote)
Molecular weightTheoretical: 8.836371 KDa
SequenceString:
MNADLLLAVV PQTAAWSAKT CSVMVISNLL CIVAGRYVIQ VKGSGPSLPL TGSFSNFGLP ELLATTSLGH IVGSGAILGL SYVGLLS

UniProtKB: Photosystem I reaction center subunit PsaK

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Macromolecule #19: Photosystem I reaction center subunit XI

MacromoleculeName: Photosystem I reaction center subunit XI / type: protein_or_peptide / ID: 19 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chroomonas placoidea (eukaryote)
Molecular weightTheoretical: 16.490883 KDa
SequenceString:
MAQFVKPYND DPFVGNLATP VSTSSFTRSF LSNLPAYRSG LSPLLRGLEI GMTHGYFLVG PFYKLGPLRN SDVALISGLF SSIGLIIIL AACLAIYGVV SFNEDDNTDS LQTSRGWKQF TSGWLVGSIG GASFAYILIS NIVFLQTSGL NLIK

UniProtKB: Photosystem I reaction center subunit XI

+
Macromolecule #20: Photosystem I reaction center subunit XII

MacromoleculeName: Photosystem I reaction center subunit XII / type: protein_or_peptide / ID: 20 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chroomonas placoidea (eukaryote)
Molecular weightTheoretical: 3.247952 KDa
SequenceString:
MISDTQIFVA LILALVSLVL AIRLGTALYQ

UniProtKB: Photosystem I reaction center subunit XII

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Macromolecule #21: PsaO

MacromoleculeName: PsaO / type: protein_or_peptide / ID: 21 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chroomonas placoidea (eukaryote)
Molecular weightTheoretical: 16.384227 KDa
SequenceString:
MMKVAFLVLL AAATANAFAP TAAFLPKAHG IAASKPAMAL RAAPRAVAKP LAVQAKFEIS DGVEFDLNPL VLAISFLGWS LPGLLPSNI PLYGGKGLTT ALFAEIGEHL QTFPAPPPIG DPFWVILFIW HSGLFATMIF GTIGYNGYGP KSTTKY

+
Macromolecule #22: PsaR

MacromoleculeName: PsaR / type: protein_or_peptide / ID: 22 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chroomonas placoidea (eukaryote)
Molecular weightTheoretical: 14.468676 KDa
SequenceString:
NSSPSKMVRA LCFLALIASA AAFSTAPGLA LRSSVRPATS TKTPMKMAGY SPVPSPDNTK ETYWETKAPS SQVLGIGKDV SSGNYIVAS VVAAVVGAAC TGQCIPLTVS PNPVFILGSF LLPYSWALHV AAWIQRNNGK

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Macromolecule #23: CCPI-S

MacromoleculeName: CCPI-S / type: protein_or_peptide / ID: 23 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chroomonas placoidea (eukaryote)
Molecular weightTheoretical: 29.319771 KDa
SequenceString: VKTAALVLLG AAVAEAFAPT PVALNRPGRA DAVTSLRMAQ AAPPSKLPEN MAKKNALKVN KEQWGIEEAI KVDAKAAAPA PKAAAPAPK KAAPKKGAAP AEATVGFSGV PSDFCRPAPT AFPAEPAGMT VFGARGPRAE GHRDKFGSRH AAVSLACAAL L WQPISQAG ...String:
VKTAALVLLG AAVAEAFAPT PVALNRPGRA DAVTSLRMAQ AAPPSKLPEN MAKKNALKVN KEQWGIEEAI KVDAKAAAPA PKAAAPAPK KAAPKKGAAP AEATVGFSGV PSDFCRPAPT AFPAEPAGMT VFGARGPRAE GHRDKFGSRH AAVSLACAAL L WQPISQAG MYSIDSGSLA KKSFSEMEVP GFGDAKKVPT IESFFPFTKN GFDASPALFG KDSMIVFENP LGKCGAYASS CH TFLDEMG DMLKATPQEM PRSKAAPTYS FPWMYDHAAW KK

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Macromolecule #24: ACPI-13/10

MacromoleculeName: ACPI-13/10 / type: protein_or_peptide / ID: 24 / Number of copies: 2 / Enantiomer: LEVO
Source (natural)Organism: Chroomonas placoidea (eukaryote)
Molecular weightTheoretical: 22.270992 KDa
SequenceString: MIRAVILAGC VAAASAFAPG ASLVGARAAT RAVSAAGPKM QMSPSIPFLK KPDALDGTAA GDIGFDPLGF SSLADIKFLQ EAEIKHCRI AMLAAAGSIA QDIFTFPGYS ALTGGAKMTA AHDKLVATGT MGQILFWVSF AEVFGTVALF DTLDGKRAPG D FKFDPLGM ...String:
MIRAVILAGC VAAASAFAPG ASLVGARAAT RAVSAAGPKM QMSPSIPFLK KPDALDGTAA GDIGFDPLGF SSLADIKFLQ EAEIKHCRI AMLAAAGSIA QDIFTFPGYS ALTGGAKMTA AHDKLVATGT MGQILFWVSF AEVFGTVALF DTLDGKRAPG D FKFDPLGM GKKNMADMQL KEIKNGRLAM LGIAGMTHGY FISGKGPLEL LGNFPTA

+
Macromolecule #25: ACPI-14

MacromoleculeName: ACPI-14 / type: protein_or_peptide / ID: 25 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chroomonas placoidea (eukaryote)
Molecular weightTheoretical: 23.755605 KDa
SequenceString: MFRAALLLAC LASASAFAPG SLMMPKSATR AAISRGPRMQ ANDDLAVPFL ERPPMLDGSY AGDIGFDPVG FSNYFDLRWL REAELKHGR VCMLGVVGFL VQEFVTLPMF SNGVTPVDDF FVVPATGLWQ IFFTIGFVEA FSNGFKLTPS DMFADDRAPG D LGFDPLGC ...String:
MFRAALLLAC LASASAFAPG SLMMPKSATR AAISRGPRMQ ANDDLAVPFL ERPPMLDGSY AGDIGFDPVG FSNYFDLRWL REAELKHGR VCMLGVVGFL VQEFVTLPMF SNGVTPVDDF FVVPATGLWQ IFFTIGFVEA FSNGFKLTPS DMFADDRAPG D LGFDPLGC GKDPAALARR QLVEVKNGRL AMIAFGGMLH QQLLTKQGVI EQLTNFKAIM

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Macromolecule #26: ACPI-9

MacromoleculeName: ACPI-9 / type: protein_or_peptide / ID: 26 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chroomonas placoidea (eukaryote)
Molecular weightTheoretical: 27.212057 KDa
SequenceString: MFRLSILAAL VAAASAFAPG AMLPQGRAVA RASAASGIRM QSKSAAIPFL EKPPMLDGSV PGDVGFDPLW VSSMLPDKGW YLFLQEAEI KHGRVAMLAA AGAIVQDIFT FPGVTDTIGN VKMTSAHDKF LSMEGAGGKV ATMHQLLLWL GLLEVVSAFA T IQMFGGTS ...String:
MFRLSILAAL VAAASAFAPG AMLPQGRAVA RASAASGIRM QSKSAAIPFL EKPPMLDGSV PGDVGFDPLW VSSMLPDKGW YLFLQEAEI KHGRVAMLAA AGAIVQDIFT FPGVTDTIGN VKMTSAHDKF LSMEGAGGKV ATMHQLLLWL GLLEVVSAFA T IQMFGGTS SRMPGEFGFD PLGFGKSEAA MKTYRLKEVK NGRLAMIGIG GMVHHYLLTG KGPLQFLGGI PNYKSCIEHP AS GLPYLMK AVGPVLPKIC

+
Macromolecule #27: ACPI-11

MacromoleculeName: ACPI-11 / type: protein_or_peptide / ID: 27 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chroomonas placoidea (eukaryote)
Molecular weightTheoretical: 22.451303 KDa
SequenceString: MLRTVAILAC LASASAFAPL ASLPMTGTRA TKAVGPRMQE QMAVPFLQPP SKLSSSMQGY AGFDPLGFSE KFDVNWLREA EIKNGRVAM LGVVGLLIPE FITLPMYSAG ATPYDSAFTV PAWALIQITL GCGAAEYYMH KGKMTPDNMF DGSRAPGDFG W GKADPVMA ...String:
MLRTVAILAC LASASAFAPL ASLPMTGTRA TKAVGPRMQE QMAVPFLQPP SKLSSSMQGY AGFDPLGFSE KFDVNWLREA EIKNGRVAM LGVVGLLIPE FITLPMYSAG ATPYDSAFTV PAWALIQITL GCGAAEYYMH KGKMTPDNMF DGSRAPGDFG W GKADPVMA TKEIKNGRLA MLAFGGIMHQ QLITKMGTFA HLVDFKPLVF

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Macromolecule #28: PsaQ

MacromoleculeName: PsaQ / type: protein_or_peptide / ID: 28 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Chroomonas placoidea (eukaryote)
Molecular weightTheoretical: 24.466158 KDa
SequenceString: AIFALGLACA DAFHTPALNG VIGARMGAET PAISRKQLLQ GAAGVAVGFL ANQGAEAASF DPNTGFPKQD GKKDLLCNGS ADKGCQPMT QAASITDKQK AVLAGKITVA ANKLSILDAE IAAMQVTKNK KKKPVLDTPY VLRYSALYLT PLVDAMEQYA A RDAKGSKM ...String:
AIFALGLACA DAFHTPALNG VIGARMGAET PAISRKQLLQ GAAGVAVGFL ANQGAEAASF DPNTGFPKQD GKKDLLCNGS ADKGCQPMT QAASITDKQK AVLAGKITVA ANKLSILDAE IAAMQVTKNK KKKPVLDTPY VLRYSALYLT PLVDAMEQYA A RDAKGSKM AGGAGLPKMG NSDKDAAKAS PLYKYITEAN TAIAAVSTAA KAGDFAGVTT ASAAVKAAAT GFLGAAKAPV IF N

+
Macromolecule #29: CHLOROPHYLL A

MacromoleculeName: CHLOROPHYLL A / type: ligand / ID: 29 / Number of copies: 255 / Formula: CLA
Molecular weightTheoretical: 893.489 Da
Chemical component information

ChemComp-CLA:
CHLOROPHYLL A

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Macromolecule #30: Chlorophyll c2

MacromoleculeName: Chlorophyll c2 / type: ligand / ID: 30 / Number of copies: 20 / Formula: KC2
Molecular weightTheoretical: 608.926 Da
Chemical component information

ChemComp-KC2:
Chlorophyll c2

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Macromolecule #31: (1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E}...

MacromoleculeName: (1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E})-3,7,12,16-tetramethyl-18-[(4~{R})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-3,5,7,9,11,13,15-heptaen-1,17- ...Name: (1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E})-3,7,12,16-tetramethyl-18-[(4~{R})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-3,5,7,9,11,13,15-heptaen-1,17-diynyl]cyclohex-3-en-1-ol
type: ligand / ID: 31 / Number of copies: 59 / Formula: II0
Molecular weightTheoretical: 564.84 Da
Chemical component information

ChemComp-II0:
(1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E})-3,7,12,16-tetramethyl-18-[(4~{R})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-3,5,7,9,11,13,15-heptaen-1,17-diynyl]cyclohex-3-en-1-ol

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Macromolecule #32: (1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E}...

MacromoleculeName: (1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(1~{R},4~{R})-2,6,6-trimethyl-4-oxidanyl-cyclohex-2-en-1-yl]octadeca- ...Name: (1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(1~{R},4~{R})-2,6,6-trimethyl-4-oxidanyl-cyclohex-2-en-1-yl]octadeca-3,5,7,9,11,13,15,17-octaen-1-ynyl]cyclohex-3-en-1-ol
type: ligand / ID: 32 / Number of copies: 4 / Formula: II3
Molecular weightTheoretical: 566.856 Da
Chemical component information

ChemComp-II3:
(1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(1~{R},4~{R})-2,6,6-trimethyl-4-oxidanyl-cyclohex-2-en-1-yl]octadeca-3,5,7,9,11,13,15,17-octaen-1-ynyl]cyclohex-3-en-1-ol

+
Macromolecule #33: (1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E}...

MacromoleculeName: (1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-(2,6,6-trimethylcyclohexen-1-yl)octadeca-3,5,7,9,11,13,15,17-octaen-1-ynyl]cyclohex-3-en-1-ol
type: ligand / ID: 33 / Number of copies: 12 / Formula: IHT
Molecular weightTheoretical: 550.856 Da
Chemical component information

ChemComp-IHT:
(1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-(2,6,6-trimethylcyclohexen-1-yl)octadeca-3,5,7,9,11,13,15,17-octaen-1-ynyl]cyclohex-3-en-1-ol

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Macromolecule #34: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE

MacromoleculeName: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE / type: ligand / ID: 34 / Number of copies: 33 / Formula: LHG
Molecular weightTheoretical: 722.97 Da
Chemical component information

ChemComp-LHG:
1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE / phospholipid*YM

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Macromolecule #35: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE

MacromoleculeName: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE / type: ligand / ID: 35 / Number of copies: 7 / Formula: LMG
Molecular weightTheoretical: 787.158 Da
Chemical component information

ChemComp-LMG:
1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE

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Macromolecule #36: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL

MacromoleculeName: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
type: ligand / ID: 36 / Number of copies: 7 / Formula: SQD
Molecular weightTheoretical: 795.116 Da
Chemical component information

ChemComp-SQD:
1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL

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Macromolecule #37: (6'R,11cis,11'cis,13cis,15cis)-4',5'-didehydro-5',6'-dihydro-beta...

MacromoleculeName: (6'R,11cis,11'cis,13cis,15cis)-4',5'-didehydro-5',6'-dihydro-beta,beta-carotene
type: ligand / ID: 37 / Number of copies: 25 / Formula: 8CT
Molecular weightTheoretical: 536.873 Da
Chemical component information

ChemComp-8CT:
(6'R,11cis,11'cis,13cis,15cis)-4',5'-didehydro-5',6'-dihydro-beta,beta-carotene

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Macromolecule #38: DIGALACTOSYL DIACYL GLYCEROL (DGDG)

MacromoleculeName: DIGALACTOSYL DIACYL GLYCEROL (DGDG) / type: ligand / ID: 38 / Number of copies: 2 / Formula: DGD
Molecular weightTheoretical: 949.299 Da
Chemical component information

ChemComp-DGD:
DIGALACTOSYL DIACYL GLYCEROL (DGDG)

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Macromolecule #39: IRON/SULFUR CLUSTER

MacromoleculeName: IRON/SULFUR CLUSTER / type: ligand / ID: 39 / Number of copies: 3 / Formula: SF4
Molecular weightTheoretical: 351.64 Da
Chemical component information

ChemComp-FS1:
IRON/SULFUR CLUSTER

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Macromolecule #40: PHYLLOQUINONE

MacromoleculeName: PHYLLOQUINONE / type: ligand / ID: 40 / Number of copies: 2 / Formula: PQN
Molecular weightTheoretical: 450.696 Da
Chemical component information

ChemComp-PQN:
PHYLLOQUINONE

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Experimental details

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Structure determination

Methodcryo EM
Processingsingle particle reconstruction
Aggregation stateparticle

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Sample preparation

BufferpH: 7.5
VitrificationCryogen name: ETHANE

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Electron microscopy

MicroscopeTFS KRIOS
Image recordingFilm or detector model: GATAN K3 BIOCONTINUUM (6k x 4k) / Average electron dose: 60.0 e/Å2
Electron beamAcceleration voltage: 300 kV / Electron source: FIELD EMISSION GUN
Electron opticsIllumination mode: FLOOD BEAM / Imaging mode: BRIGHT FIELD / Nominal defocus max: 2.0 µm / Nominal defocus min: 1.0 µm
Experimental equipment
Model: Titan Krios / Image courtesy: FEI Company

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Image processing

Startup modelType of model: PDB ENTRY
PDB model - PDB ID:

6ly5

Final reconstructionResolution.type: BY AUTHOR / Resolution: 2.25 Å / Resolution method: FSC 0.143 CUT-OFF / Number images used: 171764
Initial angle assignmentType: MAXIMUM LIKELIHOOD
Final angle assignmentType: MAXIMUM LIKELIHOOD
FSC plot (resolution estimation)

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