- EMDB-23042: Chimeric flavivirus between Binjari virus and Dengue virus serotype-2 -
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基本情報
登録情報
データベース: EMDB / ID: EMD-23042
タイトル
Chimeric flavivirus between Binjari virus and Dengue virus serotype-2
マップデータ
Masked sharpened map
試料
ウイルス: Binjari virus (ウイルス)
複合体: M and E from Dengue virus serotype-2 isolate ET300 form a complex that assembles into anti-parallel dimers, (M-E)2, in the T=3 icosahedral particle.
National Health and Medical Research Council (NHMRC, Australia)
APP1164216
オーストラリア
引用
ジャーナル: Nat Commun / 年: 2021 タイトル: A unified route for flavivirus structures uncovers essential pocket factors conserved across pathogenic viruses. 著者: Joshua M Hardy / Natalee D Newton / Naphak Modhiran / Connor A P Scott / Hariprasad Venugopal / Laura J Vet / Paul R Young / Roy A Hall / Jody Hobson-Peters / Fasséli Coulibaly / Daniel Watterson / 要旨: The epidemic emergence of relatively rare and geographically isolated flaviviruses adds to the ongoing disease burden of viruses such as dengue. Structural analysis is key to understand and combat ...The epidemic emergence of relatively rare and geographically isolated flaviviruses adds to the ongoing disease burden of viruses such as dengue. Structural analysis is key to understand and combat these pathogens. Here, we present a chimeric platform based on an insect-specific flavivirus for the safe and rapid structural analysis of pathogenic viruses. We use this approach to resolve the architecture of two neurotropic viruses and a structure of dengue virus at 2.5 Å, the highest resolution for an enveloped virion. These reconstructions allow improved modelling of the stem region of the envelope protein, revealing two lipid-like ligands within highly conserved pockets. We show that these sites are essential for viral growth and important for viral maturation. These findings define a hallmark of flavivirus virions and a potential target for broad-spectrum antivirals and vaccine design. We anticipate the chimeric platform to be widely applicable for investigating flavivirus biology.
複合体: M and E from Dengue virus serotype-2 isolate ET300 form a complex that assembles into anti-parallel dimers, (M-E)2, in the T=3 icosahedral particle.
超分子 #2: M and E from Dengue virus serotype-2 isolate ET300 form a complex...
超分子
名称: M and E from Dengue virus serotype-2 isolate ET300 form a complex that assembles into anti-parallel dimers, (M-E)2, in the T=3 icosahedral particle. タイプ: complex / ID: 2 / 親要素: 1 / 含まれる分子: #1-#2 詳細: The prM and E genes of Dengue virus serotype-2 isolate ET300 were integrated into the Binjari virus genome using the Circular Polymerase Extension Reaction
由来(天然)
生物種: Dengue virus 2 (デング熱ウイルス) / 株: ET200/300
組換発現
生物種: Aedes albopictus (ヒトスジシマカ) / 組換細胞: C6/36
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分子 #1: Envelope protein E
分子
名称: Envelope protein E / タイプ: protein_or_peptide / ID: 1 / コピー数: 3 / 光学異性体: LEVO
凍結剤: ETHANE / チャンバー内湿度: 100 % / チャンバー内温度: 277 K / 装置: FEI VITROBOT MARK IV 詳細: 0 second wait time, 2.5 second blot time, -2 blot force, 1 second drain time.