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- EMDB-28581: Structure of mitochondrial complex I from Drosophila melanogaster... -

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Basic information

Entry
Database: EMDB / ID: EMD-28581
TitleStructure of mitochondrial complex I from Drosophila melanogaster, Flexible-class 1
Map data
Sample
  • Complex: mitochondrial complex I from the thoracic muscles of D. melanogasterRespiratory complex I
    • Protein or peptide: x 42 types
  • Ligand: x 10 types
Function / homology
Function and homology information


Mitochondrial protein import / Glyoxylate metabolism and glycine degradation / Respiratory electron transport / Complex I biogenesis / Mitochondrial Fatty Acid Beta-Oxidation / NADH dehydrogenase / regulation of terminal button organization / protein lipoylation / Neutrophil degranulation / ubiquinone-6 biosynthetic process ...Mitochondrial protein import / Glyoxylate metabolism and glycine degradation / Respiratory electron transport / Complex I biogenesis / Mitochondrial Fatty Acid Beta-Oxidation / NADH dehydrogenase / regulation of terminal button organization / protein lipoylation / Neutrophil degranulation / ubiquinone-6 biosynthetic process / cellular respiration / acyl binding / electron transport coupled proton transport / mitochondrial ATP synthesis coupled electron transport / acyl carrier activity / NADH:ubiquinone reductase (H+-translocating) / mitochondrial respiratory chain complex I / mitochondrial respiratory chain complex I assembly / mitochondrial electron transport, NADH to ubiquinone / NADH dehydrogenase (ubiquinone) activity / quinone binding / ATP synthesis coupled electron transport / respirasome / aerobic respiration / respiratory electron transport chain / reactive oxygen species metabolic process / response to reactive oxygen species / determination of adult lifespan / mitochondrial membrane / mitochondrial intermembrane space / 2 iron, 2 sulfur cluster binding / NAD binding / FMN binding / 4 iron, 4 sulfur cluster binding / mitochondrial inner membrane / response to oxidative stress / oxidoreductase activity / mitochondrial matrix / protein-containing complex binding / mitochondrion / metal ion binding / cytoplasm
Similarity search - Function
NADH:ubiquinone oxidoreductase, ESSS subunit / ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) / NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1, NDUB1 / MNLL subunit / NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial / NADH-ubiquinone oxidoreductase, subunit 10 / NADH-ubiquinone oxidoreductase subunit 10 / Soluble ligand binding domain / NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex subunit 1 / NADH-ubiquinone oxidoreductase MWFE subunit ...NADH:ubiquinone oxidoreductase, ESSS subunit / ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) / NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1, NDUB1 / MNLL subunit / NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial / NADH-ubiquinone oxidoreductase, subunit 10 / NADH-ubiquinone oxidoreductase subunit 10 / Soluble ligand binding domain / NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex subunit 1 / NADH-ubiquinone oxidoreductase MWFE subunit / SLBB domain / NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 / Zinc finger, CHCC-type / Zinc-finger domain / NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 / NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, metazoa / NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, animal type / NADH:ubiquinone oxidoreductase subunit B14.5a (Complex I-B14.5a) / NADH dehydrogenase 1 beta subcomplex subunit 2 / NADH dehydrogenase [ubiquinone] 1 subunit C2, NDUC2 / NADH:ubiquinone oxidoreductase, subunit NDUFB4 / NADH-ubiquinone oxidoreductase subunit b14.5b (NDUFC2) / NADH-ubiquinone oxidoreductase B15 subunit (NDUFB4) / NADH dehydrogenase 1, beta subcomplex, subunit 6 / NADH:ubiquinone oxidoreductase, NDUFB6/B17 subunit / NADH:ubiquinone oxidoreductase chain 4, N-terminal / NADH:ubiquinone oxidoreductase, chain 2 / NADH dehydrogenase subunit 2, C-terminal / NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial / NADH:ubiquinone oxidoreductase, NDUFB5/SGDH subunit / NADH-ubiquinone oxidoreductase chain 4, amino terminus / NADH dehydrogenase subunit 2 C-terminus / NADH:ubiquinone oxidoreductase, NDUFB5/SGDH subunit / NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8 / GRIM-19 / NADH-ubiquinone oxidoreductase ASHI subunit (CI-ASHI or NDUFB8) / GRIM-19 protein / NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11 / NADH dehydrogenase subunit 5, C-terminal / NADH dehydrogenase subunit 5 C-terminus / NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 / NADH-ubiquinone oxidoreductase B12 subunit family / NDUFA6, LYR domain / NADH:ubiquinone oxidoreductase, NDUFS5-15kDa / NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7, NDUB7 / NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) / NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamily / NADH dehydrogenase ubiquinone Fe-S protein 4 / NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial / NDUFB9, LYR domain / NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 / NADH ubiquinone oxidoreductase subunit NDUFA12 / NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 / NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 / NADH:ubiquinone oxidoreductase, iron-sulphur subunit 5 / ETC complex I subunit conserved region / NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 6 / NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 8 / NADH-quinone oxidoreductase, chain G, C-terminal / NADH-ubiquinone oxidoreductase subunit G, C-terminal / Deoxynucleoside kinase domain / Deoxynucleoside kinase / Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. / NADH-ubiquinone oxidoreductase, 20 Kd subunit / NADH-quinone oxidoreductase, chain I / NAD(P)H-quinone oxidoreductase subunit D/H / NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site / Respiratory chain NADH dehydrogenase 49 Kd subunit signature. / NADH-quinone oxidoreductase, subunit D / Respiratory-chain NADH dehydrogenase, 49 Kd subunit / NADH:ubiquinone oxidoreductase, subunit G / Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. / Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. / NADH dehydrogenase, subunit C / NADH ubiquinone oxidoreductase, F subunit / Complex 1 LYR protein domain / NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site / Respiratory chain NADH dehydrogenase 30 Kd subunit signature. / Complex 1 protein (LYR family) / 2Fe-2S iron-sulfur cluster binding domain / Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. / NADH-ubiquinone oxidoreductase chain 4L/K / NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 / NADH-ubiquinone/plastoquinone oxidoreductase chain 6 / NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site / NADH:ubiquinone oxidoreductase, 30kDa subunit / NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal / NADH-quinone oxidoreductase, chain 5-like / NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily / Respiratory-chain NADH dehydrogenase, 30 Kd subunit / NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus / NADH-ubiquinone oxidoreductase-G iron-sulfur binding region / NADH-ubiquinone oxidoreductase-G iron-sulfur binding region / Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. / NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like / NADH-ubiquinone/plastoquinone oxidoreductase chain 4L / NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 / NADH:ubiquinone oxidoreductase, subunit 3 superfamily / NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 / Respiratory-chain NADH dehydrogenase 24 Kd subunit signature.
Similarity search - Domain/homology
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 / NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 / NADH-ubiquinone oxidoreductase chain 5 / NADH-ubiquinone oxidoreductase chain 1 / NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 / NADH-ubiquinone oxidoreductase chain 2 / NADH-ubiquinone oxidoreductase chain 3 / NADH-ubiquinone oxidoreductase chain 6 / NADH-ubiquinone oxidoreductase chain 4L / NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial ...NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 / NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 / NADH-ubiquinone oxidoreductase chain 5 / NADH-ubiquinone oxidoreductase chain 1 / NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 / NADH-ubiquinone oxidoreductase chain 2 / NADH-ubiquinone oxidoreductase chain 3 / NADH-ubiquinone oxidoreductase chain 6 / NADH-ubiquinone oxidoreductase chain 4L / NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial / NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 / NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11 / NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 / GH23780p / GEO11417p1 / NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial / Acyl carrier protein, mitochondrial / NADH-ubiquinone oxidoreductase chain 4 / NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial / GM23292p / Complex I-49kD / NADH dehydrogenase (ubiquinone) 23 kDa subunit / NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 / NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial / NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial / NADH dehydrogenase (Ubiquinone) 39 kDa subunit, isoform A / NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 / NADH dehydrogenase [ubiquinone] 1 subunit C2 / NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 / NADH dehydrogenase (Ubiquinone) 13 kDa B subunit / NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial / NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial / NADH dehydrogenase (Ubiquinone) 24 kDa subunit, isoform A / LD31474p / NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 / NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial / NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 / RH45008p / NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1 / NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial / NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13
Similarity search - Component
Biological speciesDrosophila melanogaster (fruit fly) / fruit fly (fruit fly)
Methodsingle particle reconstruction / cryo EM / Resolution: 3.3 Å
AuthorsPadavannil A / Letts JA
Funding support United States, 1 items
OrganizationGrant numberCountry
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)GM137929 United States
CitationJournal: Elife / Year: 2023
Title: Resting mitochondrial complex I from adopts a helix-locked state.
Authors: Abhilash Padavannil / Anjaneyulu Murari / Shauna-Kay Rhooms / Edward Owusu-Ansah / James A Letts /
Abstract: Respiratory complex I is a proton-pumping oxidoreductase key to bioenergetic metabolism. Biochemical studies have found a divide in the behavior of complex I in metazoans that aligns with the ...Respiratory complex I is a proton-pumping oxidoreductase key to bioenergetic metabolism. Biochemical studies have found a divide in the behavior of complex I in metazoans that aligns with the evolutionary split between Protostomia and Deuterostomia. Complex I from Deuterostomia including mammals can adopt a biochemically defined off-pathway 'deactive' state, whereas complex I from Protostomia cannot. The presence of off-pathway states complicates the interpretation of structural results and has led to considerable mechanistic debate. Here, we report the structure of mitochondrial complex I from the thoracic muscles of the model protostome . We show that although complex I (-CI) does not have a NEM-sensitive deactive state, it does show slow activation kinetics indicative of an off-pathway resting state. The resting-state structure of -CI from the thoracic muscle reveals multiple conformations. We identify a helix-locked state in which an N-terminal α-helix on the NDUFS4 subunit wedges between the peripheral and membrane arms. Comparison of the -CI structure and conformational states to those observed in bacteria, yeast, and mammals provides insight into the roles of subunits across organisms, explains why the -CI off-pathway resting state is NEM insensitive, and raises questions regarding current mechanistic models of complex I turnover.
History
DepositionOct 15, 2022-
Header (metadata) releaseMar 29, 2023-
Map releaseMar 29, 2023-
UpdateApr 5, 2023-
Current statusApr 5, 2023Processing site: RCSB / Status: Released

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Structure visualization

Supplemental images

emd_28581.png

Downloads & links

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Map

FileDownload / File: emd_28581.map.gz / Format: CCP4 / Size: 512 MB / Type: IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)
Voxel sizeX=Y=Z: 0.88 Å
Density
Contour LevelBy AUTHOR: 0.6
Minimum - Maximum-2.0644338 - 6.016722
Average (Standard dev.)0.0013250788 (±0.094477884)
SymmetrySpace group: 1
Details

EMDB XML:

Map geometry
Axis orderXYZ
Origin000
Dimensions512512512
Spacing512512512
CellA=B=C: 450.56 Å
α=β=γ: 90.0 °

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Supplemental data

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Half map: #2

Fileemd_28581_half_map_1.map
Projections & Slices
AxesZYX

Projections

Slices (1/2)
Density Histograms

Histogram

Histogram (log scale)

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Half map: #1

Fileemd_28581_half_map_2.map
Projections & Slices
AxesZYX

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Slices (1/2)
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Histogram

Histogram (log scale)

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Sample components

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Entire : mitochondrial complex I from the thoracic muscles of D. melanogaster

EntireName: mitochondrial complex I from the thoracic muscles of D. melanogasterRespiratory complex I
Components
  • Complex: mitochondrial complex I from the thoracic muscles of D. melanogasterRespiratory complex I
    • Protein or peptide: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
    • Protein or peptide: NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial
    • Protein or peptide: NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
    • Protein or peptide: NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial
    • Protein or peptide: NADH dehydrogenase (Ubiquinone) 24 kDa subunit, isoform A
    • Protein or peptide: LD31474p
    • Protein or peptide: NADH dehydrogenase (ubiquinone) 23 kDa subunit
    • Protein or peptide: NADH-ubiquinone oxidoreductase chain 3
    • Protein or peptide: NADH-ubiquinone oxidoreductase chain 1
    • Protein or peptide: NADH-ubiquinone oxidoreductase chain 4
    • Protein or peptide: NADH-ubiquinone oxidoreductase chain 5
    • Protein or peptide: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8
    • Protein or peptide: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1
    • Protein or peptide: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13
    • Protein or peptide: NADH dehydrogenase [ubiquinone] iron-sulfur protein 5
    • Protein or peptide: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11
    • Protein or peptide: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10
    • Protein or peptide: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6
    • Protein or peptide: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4
    • Protein or peptide: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
    • Protein or peptide: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial
    • Protein or peptide: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9
    • Protein or peptide: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial
    • Protein or peptide: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial
    • Protein or peptide: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3
    • Protein or peptide: Acyl carrier protein, mitochondrial
    • Protein or peptide: NADH dehydrogenase [ubiquinone] 1 subunit C2
    • Protein or peptide: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1
    • Protein or peptide: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial
    • Protein or peptide: NADH dehydrogenase (Ubiquinone) 39 kDa subunit, isoform A
    • Protein or peptide: GEO11417p1
    • Protein or peptide: Complex I-49kD
    • Protein or peptide: NADH dehydrogenase [ubiquinone] flavoprotein 3
    • Protein or peptide: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
    • Protein or peptide: NADH-ubiquinone oxidoreductase chain 2
    • Protein or peptide: NADH-ubiquinone oxidoreductase chain 4L
    • Protein or peptide: NADH-ubiquinone oxidoreductase chain 6
    • Protein or peptide: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7
    • Protein or peptide: NADH dehydrogenase (Ubiquinone) 13 kDa B subunit
    • Protein or peptide: RH45008p
    • Protein or peptide: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6
    • Protein or peptide: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial
  • Ligand: CARDIOLIPIN
  • Ligand: ZINC ION
  • Ligand: IRON/SULFUR CLUSTERIron–sulfur cluster
  • Ligand: FE2/S2 (INORGANIC) CLUSTER
  • Ligand: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
  • Ligand: 1,2-Distearoyl-sn-glycerophosphoethanolamine
  • Ligand: S-[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] tetradecanethioate
  • Ligand: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
  • Ligand: FLAVIN MONONUCLEOTIDE
  • Ligand: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE

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Supramolecule #1: mitochondrial complex I from the thoracic muscles of D. melanogaster

SupramoleculeName: mitochondrial complex I from the thoracic muscles of D. melanogaster
type: complex / ID: 1 / Chimera: Yes / Parent: 0 / Macromolecule list: #1-#42
Source (natural)Organism: Drosophila melanogaster (fruit fly)

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Macromolecule #1: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

MacromoleculeName: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
type: protein_or_peptide / ID: 1 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 16.848254 KDa
SequenceString:
MAKFLGINRL TKLFQMVREA GGLKQAYLKL YRNDDLKIGT LVGIDKYGNK YFENPYYFYG RNRWIEFAPH VNMDYDGSMI PAEWYGWMH YKTDLPPIRD GCRPKYKWIA DHSENLSGTK EAYYPYSTTP NKVEAWEPKA KKQ

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Macromolecule #2: NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial

MacromoleculeName: NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial
type: protein_or_peptide / ID: 2 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 14.383414 KDa
SequenceString:
MASKQLVNNL SKLGLPRQNW MSPLASVRHS SCRGDIEKVT HTGQVFDKED YRNARFVNAK RYVNENWGIK LIEEVPPKEC TERVVFCDG GDGPLGHPKV YINLDKPGNH ICGYCGLRFV KKDDHHH

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Macromolecule #3: NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial

MacromoleculeName: NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
type: protein_or_peptide / ID: 3 / Number of copies: 1 / Enantiomer: LEVO / EC number: NADH:ubiquinone reductase (H+-translocating)
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 78.72425 KDa
SequenceString: MIRAPLVKAL GALGSPTHQM ASRAVRTSAM VAQTPAKAPE KIEVFVDDIP VQVVPGTTVL QAAAQIGVEI PRFCYHERLA VAGNCRMCL VEVEKSPKPV AACAMPVMKG WRIKTNSDLT RKAREGVMEF LLMNHPLDCP ICDQGGECDL QDQAMAFGSD R SRFTDINY ...String:
MIRAPLVKAL GALGSPTHQM ASRAVRTSAM VAQTPAKAPE KIEVFVDDIP VQVVPGTTVL QAAAQIGVEI PRFCYHERLA VAGNCRMCL VEVEKSPKPV AACAMPVMKG WRIKTNSDLT RKAREGVMEF LLMNHPLDCP ICDQGGECDL QDQAMAFGSD R SRFTDINY TGKRAVEDKD IGPLVKTIMT RCIHCTRCVR FASEIAGVDD LGTTGRGNDM QIGTYVEKLF LTELSGNVID LC PVGALTN KPYSFVARPW EIRKVSSIDV LDAVGSNIVV STRTNEVLRI LPRENEDVNE EWLADKSRFA CDGLKRQRLV APM VRMPNG ELQAVEWEGA LIAVAKAIKA AGGQIAGISG QLADLEAQVA LKDLLNRLGS EVVATEQGFI AGGTDNRANY LLNS TIAGL EEADAVLLVG TNPRYEAPLV NTRLRKAYVH NELQIASIGP KIDLSYDHEN LGADAALVKD VCSGAHAFSK VLEGA KKPA IIIGADLLER ADGAAIHATV AEYCKKLKKP NWNPFNVLQT NAAQVGALDV GYKAGAQTAV KAQPKVLFLL NADAGK VTR EQLPKDCFVV YIGSHGDNGA SIADAVLPGA AYTEKQGIYV NTEGRPQQTL PGVSPPGMAR EDWKILRALS EVVGKPL PY DNLDELRNRL EDVAPHLTRL GQLEPAGDAG AAGTISKSIG GGAIDIKLKE LRDYFMTDAI SRASPTMAKC ISAVNKQQ R ENEAKQSVAI

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Macromolecule #4: NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial

MacromoleculeName: NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial
type: protein_or_peptide / ID: 4 / Number of copies: 1 / Enantiomer: LEVO / EC number: NADH:ubiquinone reductase (H+-translocating)
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 30.013244 KDa
SequenceString: MAALIRNLGA RAAVAALSAK HVVPAAGSTA LRMASTTPVE PKKADKPTVR QPDAVARSHL SDFGRYVAEC LPKYVQKVQL TAGDELEVL IAPEGVVPVL QFLKDHHQAQ FTNLVDIAGV DVPCRKNRFE VVYNLLSLRY NSRIRVKTYT DELTPLDSAC E VHKAANWY ...String:
MAALIRNLGA RAAVAALSAK HVVPAAGSTA LRMASTTPVE PKKADKPTVR QPDAVARSHL SDFGRYVAEC LPKYVQKVQL TAGDELEVL IAPEGVVPVL QFLKDHHQAQ FTNLVDIAGV DVPCRKNRFE VVYNLLSLRY NSRIRVKTYT DELTPLDSAC E VHKAANWY EREIWDMYGV FFANHPDLRR ILTDYGFEGH PQRRDFPLSG YVELRYDDEK KRVVCEPLEL AQEFRKFDLS AP WEQFPNF RNANPPAEVV PPQAPAKK

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Macromolecule #5: NADH dehydrogenase (Ubiquinone) 24 kDa subunit, isoform A

MacromoleculeName: NADH dehydrogenase (Ubiquinone) 24 kDa subunit, isoform A
type: protein_or_peptide / ID: 5 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 26.814693 KDa
SequenceString: MLTNCASKTL AAVRANIRAI ATSSARASDN LFVHRDTPED NPNIPFEFTA ENKKRVEAIL SIYPEGHKRG AMIPLLDLAQ RQYGWLPIS AMHKVAEILQ LPNMRVYEVA TFYTMFMRKP TGKYHIQVCT TTPCWLRGSD DILETCKKQL GIGVGDTTKD R KFTISEVE ...String:
MLTNCASKTL AAVRANIRAI ATSSARASDN LFVHRDTPED NPNIPFEFTA ENKKRVEAIL SIYPEGHKRG AMIPLLDLAQ RQYGWLPIS AMHKVAEILQ LPNMRVYEVA TFYTMFMRKP TGKYHIQVCT TTPCWLRGSD DILETCKKQL GIGVGDTTKD R KFTISEVE CLGACVNAPM VAINDDYYED LTSKDMQDIL NDLKADKISP PGPRNGRFAS EPKGEPTSLS EEPKGPGFGL QA GL

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Macromolecule #6: LD31474p

MacromoleculeName: LD31474p / type: protein_or_peptide / ID: 6 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 24.622855 KDa
SequenceString: MLRSAMMSST LSRALQKATQ TPNASISALP ALNLALVRQQ QTLPVAEVAQ NLPKKGYSPF GTKQSSVAEW SLARLDDLLN WGRKGSIWP LTFGLACCAV EMMHIAAPRY DMDRYGVVFR ASPRQADVII VAGTLTNKMA PALRKVYDQM PEPRWVISMG S CANGGGYY ...String:
MLRSAMMSST LSRALQKATQ TPNASISALP ALNLALVRQQ QTLPVAEVAQ NLPKKGYSPF GTKQSSVAEW SLARLDDLLN WGRKGSIWP LTFGLACCAV EMMHIAAPRY DMDRYGVVFR ASPRQADVII VAGTLTNKMA PALRKVYDQM PEPRWVISMG S CANGGGYY HYSYSVVRGC DRIIPVDIYV PGCPPTAEAL MYGVLQLQKK VKRMKTLQMW YRK

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Macromolecule #7: NADH dehydrogenase (ubiquinone) 23 kDa subunit

MacromoleculeName: NADH dehydrogenase (ubiquinone) 23 kDa subunit / type: protein_or_peptide / ID: 7 / Number of copies: 1 / Enantiomer: LEVO / EC number: NADH:ubiquinone reductase (H+-translocating)
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 24.60998 KDa
SequenceString: MSLTMRIFTA SRNGQRLFGS HGARLLAAQR AEPKDIVEVP KGYVYVNNKE LSMEFADITD RAASTMFFGE LLRGFAVTLA HIFKEPATI NYPFEKGPLS PRFRGEHALR RYPSGEERCI ACKLCEAICP AQAITIEAEE RADGSRRTTR YDIDMTKCIY C GFCQEACP ...String:
MSLTMRIFTA SRNGQRLFGS HGARLLAAQR AEPKDIVEVP KGYVYVNNKE LSMEFADITD RAASTMFFGE LLRGFAVTLA HIFKEPATI NYPFEKGPLS PRFRGEHALR RYPSGEERCI ACKLCEAICP AQAITIEAEE RADGSRRTTR YDIDMTKCIY C GFCQEACP VDAIVEGPNF EFSTETHEEL LYNKEKLLCN GDKWESEIAS NLQADHLYR

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Macromolecule #8: NADH-ubiquinone oxidoreductase chain 3

MacromoleculeName: NADH-ubiquinone oxidoreductase chain 3 / type: protein_or_peptide / ID: 8 / Number of copies: 1 / Enantiomer: LEVO / EC number: NADH:ubiquinone reductase (H+-translocating)
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 13.572529 KDa
SequenceString:
MFSIIFIALL ILLITTIVMF LASILSKKAL IDREKSSPFE CGFDPKSSSR LPFSLRFFLI TIIFLIFDVE IALILPMIII MKYSNIMIW TITSIIFILI LLIGLYHEWN QGMLNWSN

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Macromolecule #9: NADH-ubiquinone oxidoreductase chain 1

MacromoleculeName: NADH-ubiquinone oxidoreductase chain 1 / type: protein_or_peptide / ID: 9 / Number of copies: 1 / Enantiomer: LEVO / EC number: NADH:ubiquinone reductase (H+-translocating)
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 36.38352 KDa
SequenceString: MFYMEFILSL IGSLLLIICV LVSVAFLTLL ERKVLGYIQI RKGPNKVGLM GIPQPFCDAI KLFTKEQTYP LLSNYLSYYI SPIFSLFLS LFVWMCMPFF VKLYSFNLGG LFFLCCTSLG VYTVMVAGWS SNSNYALLGG LRAVAQTISY EVSLALILLS F IFLIGSYN ...String:
MFYMEFILSL IGSLLLIICV LVSVAFLTLL ERKVLGYIQI RKGPNKVGLM GIPQPFCDAI KLFTKEQTYP LLSNYLSYYI SPIFSLFLS LFVWMCMPFF VKLYSFNLGG LFFLCCTSLG VYTVMVAGWS SNSNYALLGG LRAVAQTISY EVSLALILLS F IFLIGSYN MIYFFFYQVY MWFLIILFPM ALVWVSISLA ETNRTPFDFA EGESELVSGF NVEYSSGGFA LIFMAEYASI LF MSMLFCV IFLGCDVFNL LFYMKLTFIS FVFIWVRGTL PRFRYDKLMY LAWKCFLSFS LNYLLFFIGF KILLFSLL

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Macromolecule #10: NADH-ubiquinone oxidoreductase chain 4

MacromoleculeName: NADH-ubiquinone oxidoreductase chain 4 / type: protein_or_peptide / ID: 10 / Number of copies: 1 / Enantiomer: LEVO / EC number: NADH:ubiquinone reductase (H+-translocating)
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 51.383047 KDa
SequenceString: MLKIIFFLLF LIPFCFINNM YWMVQIMMFF ISFIFLLMNN FMNYWSEISY FLGCDMLSYG LILLSLWICS LMLLASEMIN KHNNYKNLF LLNIIILLLL LILTFSSMSL FMFYLFFESS LIPTLFLILG WGYQPERLQA GLYLLFYTLL VSLPMLIGIF Y VMNKIGSM ...String:
MLKIIFFLLF LIPFCFINNM YWMVQIMMFF ISFIFLLMNN FMNYWSEISY FLGCDMLSYG LILLSLWICS LMLLASEMIN KHNNYKNLF LLNIIILLLL LILTFSSMSL FMFYLFFESS LIPTLFLILG WGYQPERLQA GLYLLFYTLL VSLPMLIGIF Y VMNKIGSM NFYLMNNFMF NYDLLYFCLL CAFLVKMPMF LVHLWLPKAH VEAPVSGSMI LAGIMLKLGG YGMLRVISFL QL MNLKYSF VWISISLVGG VLVSLVCLRQ TDLKALIAYS SVAHMGIVLS GLLTMTYWGL CGSYTLMIAH GLCSSGLFCL ANV SYERLG SRSMLINKGL LNFMPSMTLW WFLLSSANMA APPTLNLLGE ISLLNSIVSW SWISMILLSF LSFFSAAYTL YLYS FSQHG KLFSGVYSFS SGKIREYLLM LLHWLPLNLL ILKSESFMLW L

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Macromolecule #11: NADH-ubiquinone oxidoreductase chain 5

MacromoleculeName: NADH-ubiquinone oxidoreductase chain 5 / type: protein_or_peptide / ID: 11 / Number of copies: 1 / Enantiomer: LEVO / EC number: NADH:ubiquinone reductase (H+-translocating)
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 65.777867 KDa
SequenceString: MKYLSICSIS FVNLISMSLS CFLLSLYFLL NDMIYFIEWE LVSLNSMSIV MTFLFDWMSL LFMSFVLMIS SLVIFYSKEY MMNDNHINR FIMLVLMFVL SMMLLIISPN LISILLGWDG LGLVSYCLVI YFQNIKSYNA GMLTALSNRI GDVALLLSIA W MLNYGSWN ...String:
MKYLSICSIS FVNLISMSLS CFLLSLYFLL NDMIYFIEWE LVSLNSMSIV MTFLFDWMSL LFMSFVLMIS SLVIFYSKEY MMNDNHINR FIMLVLMFVL SMMLLIISPN LISILLGWDG LGLVSYCLVI YFQNIKSYNA GMLTALSNRI GDVALLLSIA W MLNYGSWN YIFYLEIMQN EFEMLMIGSL VMLAAMTKSA QIPFSSWLPA AMAAPTPVSA LVHSSTLVTA GVYLLIRFNI IL STSWLGQ LMLLLSGLTM FMAGLGANFE FDLKKIIALS TLSQLGLMMS ILSMGFLKLA MFHLLTHALF KALLFMCAGA IIH NMNNSQ DIRLMGGLSI HMPLTSACFN VSNLALCGMP FLAGFYSKDM ILEIVSISNV NMFSFFLYYF STGLTVSYSF RLVY YSMTG DLNCGSLNML NDESWIMLRG MMGLLIMSII GGSMLNWLIF PFPYMICLPI YMKLLTLFVC IVGGLFGYLI SLSNL FFLN KSLFMYNLST FLGSMWFMPY ISTYGMIFYP LNYGQLVVKS FDQGWSEYFG GQHLYQKLSM YSKTLFLMHN NSLKIY LLL FVFWILILLI LLFL

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Macromolecule #12: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8

MacromoleculeName: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8
type: protein_or_peptide / ID: 12 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 19.87342 KDa
SequenceString:
MVITNNTTLP EESELNVQEL NLSSAALRAG AFHLGKQCEQ ANNEFMLCRQ ELDDPRACLA EGKAVTSCAL DFFRKVKKTC HEEFTQYAT CLDKSSGTMA FSHCRKTQGV FDKCIKDNFD WDRPSYGYFS RAKVIQSARE APKKEEKVSY PDATPGLPED Y PKPPAKYG SRFHWLE

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Macromolecule #13: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1

MacromoleculeName: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1
type: protein_or_peptide / ID: 13 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 14.878194 KDa
SequenceString:
MWFEILPGAV IITTLLSVPI YAMYGLDKLM IGNAFRRNMD ERFSRVMYQR DFRLTDNPYK MNGLEQIPDE EVKKEEKDPN EDSDDPAIV KKREKERKLR EKQLKKEEKL REKQLKEEEK QKKN

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Macromolecule #14: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13

MacromoleculeName: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13
type: protein_or_peptide / ID: 14 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 17.773566 KDa
SequenceString:
MATAVPHCPP KQDLPPPGGY KKIPFARVPP KSYFTGFTTI GTYVVVTAVG LGIYYLTAKK VKRDEIEMRS AQNVIFPILV AERDREFLR QLRRNRDEEA ELMKNVPGWE VGTWYGEPVF KTLPEDTLVT PIFKEFYAHS DWKSYAKRAH LKLWS

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Macromolecule #15: NADH dehydrogenase [ubiquinone] iron-sulfur protein 5

MacromoleculeName: NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 / type: protein_or_peptide / ID: 15 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 12.015969 KDa
SequenceString:
MSLTPFLRLP LTDLTGCLIN HQTYDKCGKF EMKMMECFEA YGLERGKREC ADLISDFQEC VGMQKQLMRF HAMRNERYKQ WLKGERKGQ EFFADPPRVD AY

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Macromolecule #16: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11

MacromoleculeName: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11
type: protein_or_peptide / ID: 16 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 18.433131 KDa
SequenceString:
MSLLRSKYYD HPDGEDAFGK IVATNKYAVS AGVAWSMFDV LTLSKPQGYL PTLGRFAYNT GPLMGMATAF TLTTLVATNA RGKDDKINY LIGGFAAGGV FGAWKHNHVA GLCAGLFLGI AGVIKKMSIE QGWEFFPNTP IKQYGGLNIA GNDWTIMADP P KNWTTEKP KE

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Macromolecule #17: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10

MacromoleculeName: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10
type: protein_or_peptide / ID: 17 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 18.946418 KDa
SequenceString:
MPEPRSPMAS FAESVLNVID GPITWFRESI VEPNQQKQNW YHQRFRRVPT IDQCYTDDAV CRFEADQQFR RDRMVDNEIV NILRQRFED CTLYEAPDHM VKCRPLMDQY EKATENWFIK YGDLGGYANA KTAYMKQKHR LIWERRHGPV GSGMKEEAAH

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Macromolecule #18: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6

MacromoleculeName: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6
type: protein_or_peptide / ID: 18 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 19.025879 KDa
SequenceString:
MVAGGASETG GVKPMVIAGR MVRERERLIG MSPEERAWRK QWLKDQELHH GPRKVPALEL ELNNPIKRFY RAPLDKVCNV LEPVLGFQR AYTVRFWTGK ALLALTGIYA GAYYFKYNQN DWTRKGGWRV IHSRKQCVPG DEGYPKVSDR SAPSDYAARG F NESPLKA

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Macromolecule #19: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4

MacromoleculeName: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4
type: protein_or_peptide / ID: 19 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 13.157016 KDa
SequenceString:
MVLSNEEQEF IKRKHEATLK LRQEFLKQSS NPYRHATGEG GTVFDAGLAR FQAMRVSNYE HFKPTGKSFR TGLFAVVLPI ALYAWALKA ERDGREEKYR TGQVAYKDRQ FKFI

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Macromolecule #20: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7

MacromoleculeName: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
type: protein_or_peptide / ID: 20 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 13.905104 KDa
SequenceString:
MGNALTHYMK PDVMPGPDVV PTFDPLLGFK SRKERVMIAT QEEMESAKLP LEFRDYCAHL AIAYQACRSD TFPFVYKCAH QKHEYLTCE YEDYVLRMKE FERERRLLER QKRLNKAA

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Macromolecule #21: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mito...

MacromoleculeName: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial
type: protein_or_peptide / ID: 21 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 22.065145 KDa
SequenceString:
MVGWSRLLSP AAKFASYRAV LQEPACRNAL HQQLRRMGGD HGHHQMIIKP SRFQWDKFKD LLHFYVMLGV IPVTALVLYA NIFVGPAQL AEIPEGYEPK HWEYEKHPIS RFISRYILNS DQQNYEKSLH YLYEENEKAQ IRLLEDEVRR KMSERNDYQA Y YYRPSVAK YHRISKEAAD ELEALRGD

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Macromolecule #22: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9

MacromoleculeName: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9
type: protein_or_peptide / ID: 22 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 17.416799 KDa
SequenceString:
MAQVPLAIVS HKRQVCSLYK RALRNLESWY DRRNVYRYRA VQLRARFDEN RSKDLGEGIR LLACGQRELF ETRHFQPRNF ANSAGGCAF EREVIPPDWV LDYWHPLEKA QYPEYFAKRE QRKKEFVTWW EKQYGKPDPK DLGHH

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Macromolecule #23: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mit...

MacromoleculeName: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial
type: protein_or_peptide / ID: 23 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 16.988021 KDa
SequenceString:
MSALFRLTNR AVALQRSLVA NQAAVVRAIN TSPKKDETIT APTSLTTEDF ANPSPKNWQS YGFDYKDQVE DRKATKSTFF VTVTLCLVW GSFYWAYLPD TQFRNWAQRE GFLELRRREL AGVDLVSPNY VDPASITLPS DEDLGDTEII I

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Macromolecule #24: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mito...

MacromoleculeName: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial
type: protein_or_peptide / ID: 24 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 20.229873 KDa
SequenceString:
MSAFVKTVCL AQKLCAANPV VARQAIRSMA GWNKDYKPGP YPQTEKERLA AAKKYYLLPE EYKPYADDGL GYGDYPKLGY GLGVEAKDS YYPWDYPEHK RNQHEPISAD HDLYSEDRWS QAEPPRYSNA YYFACFLGVM SGCLALYYWL DDKKMYRPVA A KQYPSPGV KHYTFEK

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Macromolecule #25: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3

MacromoleculeName: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3
type: protein_or_peptide / ID: 25 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 12.113603 KDa
SequenceString:
MGGHHGEPYT VPHASTYKVE SVPQLVEVKE ALGRQGLKDP WLRNEVWRYE PKAFGTHRSR LNTFLFRGLG VGFCAFLATV AVEYALGIG KGQGGHGHGH GHEEHGDKGH H

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Macromolecule #26: Acyl carrier protein, mitochondrial

MacromoleculeName: Acyl carrier protein, mitochondrial / type: protein_or_peptide / ID: 26 / Number of copies: 2 / Enantiomer: LEVO
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 17.257992 KDa
SequenceString:
MSFTQIARSC SRLAATLAPR RVASGILIQS QASRMMHRIA VPSMTSQLSQ ECRGRWQTQL VRKYSAKPPL SLKLINERVL LVLKLYDKI DPSKLNVESH FINDLGLDSL DHVEVIMAME DEFGFEIPDS DAEKLLKPAD IIKYVADKED VYE

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Macromolecule #27: NADH dehydrogenase [ubiquinone] 1 subunit C2

MacromoleculeName: NADH dehydrogenase [ubiquinone] 1 subunit C2 / type: protein_or_peptide / ID: 27 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 12.925802 KDa
SequenceString:
MSAVNDPLEL LTNKGTHEPS FLSPIWNPIA CGVAGVGAAI FINWGFRKPV FSGIQKHIAF GAIGVGAGAY FDQKRNEYLA KRDAVLRHY IELHPDDFPV KERKTYGQVL ESWVPVR

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Macromolecule #28: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1

MacromoleculeName: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1
type: protein_or_peptide / ID: 28 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 6.232307 KDa
SequenceString:
MVLGLDKRAL WGALPLLGFA IGHFLDKKET ERMTMFRDKS ALYGRPAGSE GKAPSW

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Macromolecule #29: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial

MacromoleculeName: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial
type: protein_or_peptide / ID: 29 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 20.710354 KDa
SequenceString:
MSALRQVMCR STASLQLYQA NRAAAARWAS TATDGGPLDP KTALARPEEL EQRNKLSGKI TVPTAVNLSP ISGVPEEHIR ERRVRIHIP PKNAMQSGTD NVNTWQIEFD NRERWENPLM GWASSGDPLS NMNVQFGSPE EAITFCERNG WRWYVDGAAK P KKERVKNY GINFAWNKRT RVSTK

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Macromolecule #30: NADH dehydrogenase (Ubiquinone) 39 kDa subunit, isoform A

MacromoleculeName: NADH dehydrogenase (Ubiquinone) 39 kDa subunit, isoform A
type: protein_or_peptide / ID: 30 / Number of copies: 1 / Enantiomer: LEVO / EC number: NADH dehydrogenase
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 46.891699 KDa
SequenceString: MAAIVLTRNL QLAKHHGSGV VGVLCLRGYS AAAAPPEDGP RPLKTTNPAA MKRGTGGRSS FNGIVATVFG ATGFVGRYVC NKLGKSGTQ MILPYRGDDS DVIRLKVTGD LGQVLFHFYN LEDPASIRDA VKHSNVVINL VGRDFETKNF KFKDVHVNGA E RIARIARE ...String:
MAAIVLTRNL QLAKHHGSGV VGVLCLRGYS AAAAPPEDGP RPLKTTNPAA MKRGTGGRSS FNGIVATVFG ATGFVGRYVC NKLGKSGTQ MILPYRGDDS DVIRLKVTGD LGQVLFHFYN LEDPASIRDA VKHSNVVINL VGRDFETKNF KFKDVHVNGA E RIARIARE AGVERLIHLS SLNVEANPKD LYVKGGSEWL KSKYEGELRV RDAFPNATII RPADIYGSED RFLRYYAHIW RR QFRSMPL WHKGEKTVKQ PVYVSDVAQA IINAAKDPDS AGRIYQAVGP KRYQLSELVD WFHRLMRKDQ KRWGYMRYDM RWD PTFLLK AKLNSFICPG TPIGGLHPAR IEREAVTDKV LTGVPTLEDL GVTLTTMEQQ VPWELRPYRA ALYYDAELGE FETP SPPKC IEARDELRLF A

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Macromolecule #31: GEO11417p1

MacromoleculeName: GEO11417p1 / type: protein_or_peptide / ID: 31 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 10.758288 KDa
SequenceString:
MSFALRLGSS IGCFHRTILG RDIIQRKSHV VSYRNGPPPH SKATKIGALT VGGAMWWWVI WHLWHEPDHI TGEFDYPNSR KWSNTELGV PKDGF

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Macromolecule #32: Complex I-49kD

MacromoleculeName: Complex I-49kD / type: protein_or_peptide / ID: 32 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 52.985953 KDa
SequenceString: MANIMRRTLI PGLSHLRLRP QLVAAGSAAL TSQETRRGAA KWYPDPEFMK QFSGPVMYPD EVTSLWTVPP WNSKVTPVEK SVRNLTLNF GPQHPAAHGV LRLVLELDGE TVMRADPHIG LLHRGTEKLI EYKTYTQALP YFDRLDYVSM MCNEQCYSLA V EKLLNIDV ...String:
MANIMRRTLI PGLSHLRLRP QLVAAGSAAL TSQETRRGAA KWYPDPEFMK QFSGPVMYPD EVTSLWTVPP WNSKVTPVEK SVRNLTLNF GPQHPAAHGV LRLVLELDGE TVMRADPHIG LLHRGTEKLI EYKTYTQALP YFDRLDYVSM MCNEQCYSLA V EKLLNIDV PLRAKYIRTL FAEITRILNH IMAVGTHALD VGALTPFFWL FEEREKMMEF YERVSGARMH AAYIRPGGVS LD MPLGLMD DIYEFASKFA ERLDEVEDVL TTNRIWVQRT EDIGIVTAEE ALNYGFSGVM LRGSGIKWDL RKQQPYDAYN LVN FDVPIG TKGDCYDRYL CRVEEMRQSL RIIDQCLNQM PAGEIKTDDA KVAPPSRSEM KTSMEALIHH FKLFTQGYQV PPGA TYTAI EAPKGEFGVY LISDGSSRPY RCKIKAPGFA HLAALEKIGK QHMLADVVAI IGTLDVVFGE IDR

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Macromolecule #33: NADH dehydrogenase [ubiquinone] flavoprotein 3

MacromoleculeName: NADH dehydrogenase [ubiquinone] flavoprotein 3 / type: protein_or_peptide / ID: 33 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 2.315846 KDa
SequenceString:
(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)

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Macromolecule #34: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial

MacromoleculeName: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
type: protein_or_peptide / ID: 34 / Number of copies: 1 / Enantiomer: LEVO / EC number: NADH:ubiquinone reductase (H+-translocating)
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 51.898652 KDa
SequenceString: MAAIVRFNLL TKPQIVATLP ASLHVQRFQS TQAPPPGTPP PQTKTKFGPL ADEDRIFTNL YGRHDWRLKG ALKRGDWYKT KEIVLKGAD WIVNEIKTSG LRGRGGAGFP SGMKWSFMNK PGDGRPKYLV VNADEGEPGT CKDREIMRHD PHKLVEGCLI A GRAMGAQA ...String:
MAAIVRFNLL TKPQIVATLP ASLHVQRFQS TQAPPPGTPP PQTKTKFGPL ADEDRIFTNL YGRHDWRLKG ALKRGDWYKT KEIVLKGAD WIVNEIKTSG LRGRGGAGFP SGMKWSFMNK PGDGRPKYLV VNADEGEPGT CKDREIMRHD PHKLVEGCLI A GRAMGAQA AYIYIRGEFY NEASNMQLAI AEAYQAGLIG KNACGTGYDF DVFMHRGAGA YICGEETALI ESLEGKQGKP RL KPPFPAD VGVFGCPTTV TNVETVAVAP TICRRGGVWF ASFGRTRNSG TKLFNISGHV NRPCTVEEEM SIPLKELIER HCG GVTGGW DNLLGVIPGG SSTPIIPKNV CDDVIMDFDG LIAAQTSLGT AAIIVMDKST DVIKAIARLI SFYKHESCGQ CTPC REGIG WMNKIMTRFV KGDAQPAEID MLWEISKQIE GHTICALGDG AAWPVQGLIR HFRPEIEKRM QLHAKRVSN

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Macromolecule #35: NADH-ubiquinone oxidoreductase chain 2

MacromoleculeName: NADH-ubiquinone oxidoreductase chain 2 / type: protein_or_peptide / ID: 35 / Number of copies: 1 / Enantiomer: LEVO / EC number: NADH:ubiquinone reductase (H+-translocating)
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 39.839887 KDa
SequenceString: MFNNSSKILF ITIMIIGTLI TVTSNSWLGA WMGLEINLLS FIPLLSDNNN LMSTEASLKY FLTQVLASTV LLFSSILLML KNNMNNEIN ESFTSMIIMS ALLLKSGAAP FHFWFPNMME GLTWMNALML MTWQKIAPLM LISYLNIKYL LLISVILSVI I GAIGGLNQ ...String:
MFNNSSKILF ITIMIIGTLI TVTSNSWLGA WMGLEINLLS FIPLLSDNNN LMSTEASLKY FLTQVLASTV LLFSSILLML KNNMNNEIN ESFTSMIIMS ALLLKSGAAP FHFWFPNMME GLTWMNALML MTWQKIAPLM LISYLNIKYL LLISVILSVI I GAIGGLNQ TSLRKLMAFS SINHLGWMLS SLMISESIWL IYFFFYSFLS FVLTFMFNIF KLFHLNQLFS WFVNSKILKF TL FMNFLSL GGLPPFLGFL PKWLVIQQLT LCNQYFMLTL MMMSTLITLF FYLRICYSAF MMNYFENNWI MKMNMNSINY NMY MIMTFF SIFGLFLISL FYFMF

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Macromolecule #36: NADH-ubiquinone oxidoreductase chain 4L

MacromoleculeName: NADH-ubiquinone oxidoreductase chain 4L / type: protein_or_peptide / ID: 36 / Number of copies: 1 / Enantiomer: LEVO / EC number: NADH:ubiquinone reductase (H+-translocating)
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 11.363853 KDa
SequenceString:
MIMILYWSLP MILFILGLFC FVSNRKHLLS MLLSLEFIVL MLFFMLFIYL NMLNYESYFS MMFLTFSVCE GALGLSILVS MIRTHGNDY FQSFSIM

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Macromolecule #37: NADH-ubiquinone oxidoreductase chain 6

MacromoleculeName: NADH-ubiquinone oxidoreductase chain 6 / type: protein_or_peptide / ID: 37 / Number of copies: 1 / Enantiomer: LEVO / EC number: NADH:ubiquinone reductase (H+-translocating)
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 20.083594 KDa
SequenceString:
MIQLMLYSLI ITTSIIFLNM IHPLALGLTL LIQTIFVCLL TGLMTKSFWY SYILFLIFLG GMLVLFIYVT SLASNEMFNL SMKLTLFSS LILIFMLILS FIMDKTSSSL FLMNNDMQSI INMNSYFMEN SLSLNKLYNF PTNFITILLM NYLLITLIVI V KITKLFKG PIRMMS

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Macromolecule #38: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7

MacromoleculeName: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7
type: protein_or_peptide / ID: 38 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 11.562093 KDa
SequenceString:
MSALRRDVSP LIQRIRAFLL GREHNLALRF EDGLADRTQP QPEIPDGPSH LLSANYYCQR DGRREVLPPI DLVEQQKQLA AEGEAAKAP SSKLPTPGKV YAWD

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Macromolecule #39: NADH dehydrogenase (Ubiquinone) 13 kDa B subunit

MacromoleculeName: NADH dehydrogenase (Ubiquinone) 13 kDa B subunit / type: protein_or_peptide / ID: 39 / Number of copies: 1 / Enantiomer: LEVO / EC number: NADH dehydrogenase
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 13.808102 KDa
SequenceString:
MAKIIKASTG LTGLAVSTNP HHTLSALYGK ILRAVSKMPQ DASYRKYTEQ LVKQRADSVA QHKDITALEK AVGCGQVEEL IVQAENELI LARKMLGWKP WEKLVQAAPA KQWDWPPAQI MEPKV

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Macromolecule #40: RH45008p

MacromoleculeName: RH45008p / type: protein_or_peptide / ID: 40 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 8.412455 KDa
SequenceString:
MSASAARGST SLLKRAWNEI PDIVGGSALA LAGIVMATIG VANYYAKDGD NRRYKLGYVV YRHDDPRALK VRNDEDD

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Macromolecule #41: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6

MacromoleculeName: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6
type: protein_or_peptide / ID: 41 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 14.921432 KDa
SequenceString:
MAGREAVKRA VQQVRPILSV DREEARKRAL NLYKAWYRQI PYIVMDYDIP MTVEQCRDKL REEFVKHRNV TDIRVIDMLV IKGQMELKE SVEIWKQKGH IMRYWKESQD PKPTDFLSKF IQGVN

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Macromolecule #42: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mi...

MacromoleculeName: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial
type: protein_or_peptide / ID: 42 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: fruit fly (fruit fly)
Molecular weightTheoretical: 46.955477 KDa
SequenceString: MTAVFRVGLV RLVSRATQSP NLLQAQTNAL PAAFQQRCSI SGKTMRGGPR VPKAAPYPYK TKKYSVFNAI FDKTSKRFDE NSKVICVEG PIAAGKSKFA KELAEELDME YYPAVDLDLI YINSYGYDMR KLDPQLPPSC RSYDVRNFCL DPSHDLAAQF Q IRMYMLRY ...String:
MTAVFRVGLV RLVSRATQSP NLLQAQTNAL PAAFQQRCSI SGKTMRGGPR VPKAAPYPYK TKKYSVFNAI FDKTSKRFDE NSKVICVEG PIAAGKSKFA KELAEELDME YYPAVDLDLI YINSYGYDMR KLDPQLPPSC RSYDVRNFCL DPSHDLAAQF Q IRMYMLRY SQYIDALQHV LSTGQGVVLE RSPYSDFVFM EAMFRQGYLS RGARSVYNEL RQNTIGELLK PHLVIYLDLP VD AVKKQIK ARNVDYEVQS KVFSDAYLSD LEQLYKQQYL KDISTHAELL IYDWTAGGET EVVVEDIERI DFNQFEADIH NKK MLDWRF PLEAEWCEAR IKYCHEKPDL MNYFNVPRFD VPELVRSADD GKVWRDVWFN APGMKYRPGY NADMGDEGLL TKTK IGINQ GI

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Macromolecule #43: CARDIOLIPIN

MacromoleculeName: CARDIOLIPIN / type: ligand / ID: 43 / Number of copies: 8 / Formula: CDL
Molecular weightTheoretical: 1.464043 KDa
Chemical component information

ChemComp-CDL:
CARDIOLIPIN / phospholipid*YM / Cardiolipin

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Macromolecule #44: ZINC ION

MacromoleculeName: ZINC ION / type: ligand / ID: 44 / Number of copies: 1 / Formula: ZN
Molecular weightTheoretical: 65.409 Da

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Macromolecule #45: IRON/SULFUR CLUSTER

MacromoleculeName: IRON/SULFUR CLUSTER / type: ligand / ID: 45 / Number of copies: 6 / Formula: SF4
Molecular weightTheoretical: 351.64 Da
Chemical component information

ChemComp-FS1:
IRON/SULFUR CLUSTER / Iron–sulfur cluster

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Macromolecule #46: FE2/S2 (INORGANIC) CLUSTER

MacromoleculeName: FE2/S2 (INORGANIC) CLUSTER / type: ligand / ID: 46 / Number of copies: 2 / Formula: FES
Molecular weightTheoretical: 175.82 Da
Chemical component information

ChemComp-FES:
FE2/S2 (INORGANIC) CLUSTER / Iron–sulfur cluster

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Macromolecule #47: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE

MacromoleculeName: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE / type: ligand / ID: 47 / Number of copies: 14 / Formula: PC1
Molecular weightTheoretical: 790.145 Da
Chemical component information

ChemComp-PC1:
1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE / phospholipid*YM / Phosphatidylcholine

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Macromolecule #48: 1,2-Distearoyl-sn-glycerophosphoethanolamine

MacromoleculeName: 1,2-Distearoyl-sn-glycerophosphoethanolamine / type: ligand / ID: 48 / Number of copies: 13 / Formula: 3PE
Molecular weightTheoretical: 748.065 Da
Chemical component information

ChemComp-3PE:
1,2-Distearoyl-sn-glycerophosphoethanolamine / phospholipid*YM / Phosphatidylethanolamine

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Macromolecule #49: S-[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-b...

MacromoleculeName: S-[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] tetradecanethioate
type: ligand / ID: 49 / Number of copies: 2 / Formula: ZMP
Molecular weightTheoretical: 568.704 Da
Chemical component information

ChemComp-ZMP:
S-[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] tetradecanethioate

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Macromolecule #50: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE

MacromoleculeName: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
type: ligand / ID: 50 / Number of copies: 1 / Formula: NDP
Molecular weightTheoretical: 745.421 Da
Chemical component information

ChemComp-NDP:
NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE / Nicotinamide adenine dinucleotide phosphate

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Macromolecule #51: FLAVIN MONONUCLEOTIDE

MacromoleculeName: FLAVIN MONONUCLEOTIDE / type: ligand / ID: 51 / Number of copies: 1 / Formula: FMN
Molecular weightTheoretical: 456.344 Da
Chemical component information

ChemComp-FMN:
FLAVIN MONONUCLEOTIDE / Flavin mononucleotide

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Macromolecule #52: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE

MacromoleculeName: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE / type: ligand / ID: 52 / Number of copies: 1 / Formula: DGT
Molecular weightTheoretical: 507.181 Da
Chemical component information

ChemComp-DGT:
2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE / Deoxyguanosine triphosphate

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Experimental details

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Structure determination

Methodcryo EM
Processingsingle particle reconstruction
Aggregation stateparticle

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Sample preparation

BufferpH: 7.7
VitrificationCryogen name: ETHANE

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Electron microscopy

MicroscopeTFS GLACIOS
Electron beamAcceleration voltage: 200 kV / Electron source: FIELD EMISSION GUN
Electron opticsIllumination mode: FLOOD BEAM / Imaging mode: BRIGHT FIELDBright-field microscopy / Nominal defocus max: 3.0 µm / Nominal defocus min: 0.5 µm
Image recordingFilm or detector model: GATAN K3 (6k x 4k) / Average electron dose: 60.0 e/Å2

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Image processing

Initial angle assignmentType: MAXIMUM LIKELIHOOD
Final angle assignmentType: MAXIMUM LIKELIHOOD
Final reconstructionResolution.type: BY AUTHOR / Resolution: 3.3 Å / Resolution method: FSC 0.143 CUT-OFF / Number images used: 293389
FSC plot (resolution estimation)

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Atomic model buiding 1

RefinementProtocol: OTHER
Output model

PDB-8esw:
Structure of mitochondrial complex I from Drosophila melanogaster, Flexible-class 1

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