ChemComp-WDP: Sequanamycin 9

基本情報

• 登録情報: データベース: PDB化学物質要素 / ID: WDP
• 名称: 名称: Sequanamycin 9

Chemical information

組成

組成式: C₆₁H₁₀₂N₄O₂₀S / 原子数: 188 / 化学式量: 1243.542 / 形式電荷: 0

その他

7kgb

タイプ: non-polymer / PDB分類: HETAIN / 3文字コード: WDP / 理論座標の詳細: Corina / モデル座標のPDB-ID: 7KGB

履歴

作成	2020年10月19日
公開	2022年1月19日

• 外部リンク: UniChem / SureChEMBL / ChemSpider / Wikipedia search / Google search

詳細

SMILES

• ACDLabs 12.01: CC3C(OC1C(C(/CC(C)O1)=N/OC)O)C(C(C(C(=O)OC(C(C(C(C(C(C)(OC(=O)NC(C)(CNS(c2ccccc2)(=O)=O)C)C3)=O)C)OC(=O)CC(C)C)C)C(C)COC4C(C(C(C(C)O4)O)OC)OC)C)OC5OC(CN(C(C5)C)C)C)C
• CACTVS 3.385: CON=C1C[CH](C)O[CH](O[CH]2[CH](C)C[C](C)(OC(=O)NC(C)(C)CN[S](=O)(=O)c3ccccc3)C(=O)[CH](C)[CH](OC(=O)CC(C)C)[CH](C)[CH](OC(=O)[CH](C)[CH](O[CH]4C[CH](C)N(C)C[CH](C)O4)[CH]2C)[CH](C)CO[CH]5O[CH](C)[CH](O)[CH](OC)[CH]5OC)[CH]1O
• OpenEye OEToolkits 2.0.7: CC1CC(OC(CN1C)C)OC2C(C(C(CC(C(=O)C(C(C(C(OC(=O)C2C)C(C)COC3C(C(C(C(O3)C)O)OC)OC)C)OC(=O)CC(C)C)C)(C)OC(=O)NC(C)(C)CNS(=O)(=O)c4ccccc4)C)OC5C(C(=NOC)CC(O5)C)O)C

SMILES CANONICAL

• CACTVS 3.385: CO\N=C1/C[C@@H](C)O[C@@H](O[C@H]2[C@@H](C)C[C@](C)(OC(=O)NC(C)(C)CN[S](=O)(=O)c3ccccc3)C(=O)[C@H](C)[C@H](OC(=O)CC(C)C)[C@@H](C)[C@H](OC(=O)[C@H](C)[C@@H](O[C@H]4C[C@@H](C)N(C)C[C@H](C)O4)[C@@H]2C)[C@@H](C)CO[C@@H]5O[C@H](C)[C@@H](O)[C@@H](OC)[C@H]5OC)[C@@H]1O
• OpenEye OEToolkits 2.0.7: C[C@@H]1C[C@@H](O[C@H](CN1C)C)O[C@H]2[C@@H]([C@H]([C@H](C[C@](C(=O)[C@@H]([C@@H]([C@H]([C@H](OC(=O)[C@@H]2C)[C@@H](C)CO[C@H]3[C@@H]([C@@H]([C@@H]([C@H](O3)C)O)OC)OC)C)OC(=O)CC(C)C)C)(C)OC(=O)NC(C)(C)CNS(=O)(=O)c4ccccc4)C)O[C@H]5[C@@H](C(=NOC)C[C@H](O5)C)O)C

InChI

• InChI 1.03: InChI=1S/C61H102N4O20S/c1-32(2)25-45(66)81-51-39(9)50(34(4)30-77-58-54(75-18)53(74-17)47(67)42(12)80-58)83-56(70)41(11)52(82-46-26-35(5)65(16)29-37(7)78-46)38(8)49(84-57-48(68)44(64-76-19)27-36(6)79-57)33(3)28-61(15,55(69)40(51)10)85-59(71)63-60(13,14)31-62-86(72,73)43-23-21-20-22-24-43/h20-24,32-42,46-54,57-58,62,67-68H,25-31H2,1-19H3,(H,63,71)/b64-44+/t33-,34-,35+,36+,37-,38+,39-,40+,41+,42+,46-,47+,48+,49-,50+,51+,52-,53+,54+,57-,58+,61-/m0/s1

InChIKey

• InChI 1.03: IXJRUHKGLMWLLP-XMRFQGNKSA-N

SYSTEMATIC NAME

• ACDLabs 12.01: (2R,3S,4R,5R,7S,9S,10S,11R,12S,13R)-2-[(2S)-1-{[(2R,3R,4R,5R,6R)-5-hydroxy-3,4-dimethoxy-6-methyltetrahydro-2H-pyran-2-yl]oxy}propan-2-yl]-10-{[(2S,3R,4E,6R)-3-hydroxy-4-(methoxyimino)-6-methyltetrahydro-2H-pyran-2-yl]oxy}-3,5,7,9,11,13-hexamethyl-7-[({2-methyl-1-[(phenylsulfonyl)amino]propan-2-yl}carbamoyl)oxy]-6,14-dioxo-12-{[(2S,5R,7R)-2,4,5-trimethyl-1,4-oxazepan-7-yl]oxy}-1-oxacyclotetradecan-4-yl 3-methylbutanoate (non-preferred name)
• OpenEye OEToolkits 2.0.7: [(2~{R},3~{S},4~{R},5~{R},7~{S},9~{S},10~{S},11~{R},12~{S},13~{R})-2-[(2~{S})-1-[(2~{R},3~{R},4~{R},5~{R},6~{R})-3,4-dimethoxy-6-methyl-5-oxidanyl-oxan-2-yl]oxypropan-2-yl]-10-[(2~{S},3~{R},6~{R})-4-methoxyimino-6-methyl-3-oxidanyl-oxan-2-yl]oxy-3,5,7,9,11,13-hexamethyl-7-[[2-methyl-1-(phenylsulfonylamino)propan-2-yl]carbamoyloxy]-6,14-bis(oxidanylidene)-12-[[(2~{S},5~{R},7~{R})-2,4,5-trimethyl-1,4-oxazepan-7-yl]oxy]-1-oxacyclotetradec-4-yl] 3-methylbutanoate

PDBエントリ

全2件を表示しています

PDB-7kgb:
CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9

PDB-7sfr:
Unmethylated Mtb Ribosome 50S with SEQ-9