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- ChemComp-MLZ: N-METHYL-LYSINE -

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Basic information

EntryDatabase: PDB chemical components / ID: MLZ
NameName: N-methyl-lysine

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Chemical information

Composition
Formula: C7H16N2O2 / Number of atoms: 27 / Formula weight: 160.214 / Formal charge: 0
Others

1xer

LYS

Type: L-PEPTIDE LINKING / PDB classification: ATOMP / One letter code: K / Three letter code: MLZ / Model coordinates PDB-ID: 1XER / Parent comp.: LYS
History
Create componentJul 8, 1999
Modify descriptorJun 4, 2011
Modify backboneNov 3, 2023
External linksUniChem / ChemSpider / Brenda / ChEBI / CompTox / DrugBank / HMDB / KEGG_Ligand / Metabolights / NMRShiftDB / Nikkaji / PubChem / PubChem_TPharma / SureChEMBL / ZINC / Wikipedia search / Google search

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

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Details

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SMILES

ACDLabs 10.04O=C(O)C(N)CCCCNC
CACTVS 3.341CNCCCC[CH](N)C(O)=O
OpenEye OEToolkits 1.5.0CNCCCCC(C(=O)O)N

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SMILES CANONICAL

CACTVS 3.341CNCCCC[C@H](N)C(O)=O
OpenEye OEToolkits 1.5.0CNCCCC[C@@H](C(=O)O)N

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InChI

InChI 1.03InChI=1S/C7H16N2O2/c1-9-5-3-2-4-6(8)7(10)11/h6,9H,2-5,8H2,1H3,(H,10,11)/t6-/m0/s1

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InChIKey

InChI 1.03PQNASZJZHFPQLE-LURJTMIESA-N

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SYSTEMATIC NAME

ACDLabs 10.04N~6~-methyl-L-lysine
OpenEye OEToolkits 1.5.0(2S)-2-amino-6-methylamino-hexanoic acid

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PDB entries

Showing all 6 items

PDB-1p0y:
Crystal structure of the SET domain of LSMT bound to MeLysine and AdoHcy

PDB-2h2j:
Structure of Rubisco LSMT bound to Sinefungin and Monomethyllysine

PDB-2r5a:
Crystal Structure of the two MBT repeats from Sex-Comb on Midleg (SCM) in complex with methyl lysine

PDB-2rhy:
Crystal structure of the 3-MBT repeats from human L3MBTL1 bound to monomethyl-lysine

PDB-2vyt:
The MBT repeats of human SCML2 bind to peptides containing mono methylated lysine.

PDB-3f70:
Crystal structure of L3MBTL2-H4K20me1 complex

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