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- ChemComp-AAR: ARGININEAMIDE -

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Basic information

EntryDatabase: PDB chemical components / ID: AAR
NameName: arginineamide

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Chemical information

Composition
Formula: C6H16N5O / Number of atoms: 28 / Formula weight: 174.224 / Formal charge: 1
Others

1zto

ARG

Type: L-PEPTIDE LINKING / PDB classification: ATOMP / One letter code: R / Three letter code: AAR / Model coordinates PDB-ID: 1ZTO / Parent comp.: ARG
History
Create componentJul 8, 1999
Modify descriptorJun 4, 2011
External linksUniChem / ChemSpider / ChEBI / DrugBank / PubChem / Wikipedia search / Google search

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

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Details

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SMILES

ACDLabs 10.04O=C(N)C(N)CCCN\C(=[NH2+])N
CACTVS 3.341N[CH](CCCNC(N)=[NH2+])C(N)=O
OpenEye OEToolkits 1.5.0C(CC(C(=O)N)N)CNC(=[NH2+])N

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SMILES CANONICAL

CACTVS 3.341N[C@@H](CCCNC(N)=[NH2+])C(N)=O
OpenEye OEToolkits 1.5.0C(C[C@@H](C(=O)N)N)CNC(=[NH2+])N

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InChI

InChI 1.03InChI=1S/C6H15N5O/c7-4(5(8)12)2-1-3-11-6(9)10/h4H,1-3,7H2,(H2,8,12)(H4,9,10,11)/p+1/t4-/m0/s1

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InChIKey

InChI 1.03ULEBESPCVWBNIF-BYPYZUCNSA-O

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SYSTEMATIC NAME

ACDLabs 10.04amino{[(4S)-4,5-diamino-5-oxopentyl]amino}methaniminium
OpenEye OEToolkits 1.5.0[amino-[[(4S)-4,5-diamino-5-oxo-pentyl]amino]methylidene]azanium

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PDB entries

Showing all 4 items

PDB-1db6:
SOLUTION STRUCTURE OF THE DNA APTAMER 5'-CGACCAACGTGTCGCCTGGTCG-3' COMPLEXED WITH ARGININAMIDE

PDB-1old:
NMR STRUCTURE OF 24-MER DEOXYRIBONUCLEIC ACID, 7 STRUCTURES

PDB-2arg:
FORMATION OF AN AMINO ACID BINDING POCKET THROUGH ADAPTIVE ZIPPERING-UP OF A LARGE DNA HAIRPIN LOOP, NMR, 9 STRUCTURES

PDB-5vkb:
Ethylene forming enzyme in complex with manganese, 2-oxoglutarate and argininamide

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