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- PDB-1h4k: Sulfurtransferase from Azotobacter vinelandii in complex with hyp... -
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Open data
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Basic information
Entry | Database: PDB / ID: 1h4k | ||||||
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Title | Sulfurtransferase from Azotobacter vinelandii in complex with hypophosphite | ||||||
![]() | SULFURTRANSFERASE![]() | ||||||
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Function / homology | ![]() ![]() ![]() ![]() Similarity search - Function | ||||||
Biological species | ![]() ![]() | ||||||
Method | ![]() ![]() ![]() | ||||||
![]() | Bordo, D. / Forlani, F. / Spallarossa, A. / Colnaghi, R. / Carpen, A. / Pagani, S. / Bolognesi, M. | ||||||
![]() | ![]() Title: A Persulfurated Cysteine Promotes Active Site Reactivity in Azotobacter Vinelandii Rhodanse Authors: Bordo, D. / Forlani, F. / Spallarossa, A. / Colnaghi, R. / Carpen, A. / Bolognesi, M. / Pagani, S. #1: ![]() Title: The Crystal Structure of a Sulfurtransferase from Azotobacter Vinelandii Highliths the Evolutionary Relationship between the Rhodanese and Phosphatase Enzyme Families Authors: Bordo, D. / Deriu, D. / Colnaghi, R. / Carpen, A. / Pagani, S. / Bolognesi, M. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 69.7 KB | Display | ![]() |
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PDB format | ![]() | 50.6 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Arichive directory | ![]() ![]() | HTTPS FTP |
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-Related structure data
Related structure data | ![]() 1h4mC ![]() 1e0cS S: Starting model for refinement C: citing same article ( |
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Similar structure data |
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Links
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Assembly
Deposited unit | ![]()
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Unit cell |
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Components
#1: Protein | ![]() Mass: 29664.412 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() ![]() ![]() ![]() ![]() ![]() | ||||||
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#2: Chemical | ChemComp-PO2 / ![]() | ||||||
#3: Chemical | ![]() #4: Chemical | ![]() #5: Water | ChemComp-HOH / | ![]() Compound details | OTHER_DETAILS: HYPOPHOSPH | |
-Experimental details
-Experiment
Experiment | Method: ![]() |
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Sample preparation
Crystal | Density Matthews: 3 Å3/Da / Density % sol: 50 % |
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Crystal grow![]() | pH: 6.5 / Details: 1.7 M MGSO4, 50 MM MES PH 6.0, 5% (V/V)ETHANEDIOL |
-Data collection
Diffraction | Mean temperature: 100 K |
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Diffraction source | Source: ![]() ![]() ![]() |
Detector | Type: MARRESEARCH |
Radiation | Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray |
Radiation wavelength | Wavelength![]() |
Reflection | Resolution: 2.05→30 Å / Num. obs: 18208 / % possible obs: 92.4 % / Redundancy: 5.7 % / Rmerge(I) obs: 0.094 / Rsym value: 0.094 / Net I/σ(I): 10.5 |
Reflection shell | Resolution: 2.05→2.09 Å / Redundancy: 2 % / Rmerge(I) obs: 0.3 / Mean I/σ(I) obs: 3.8 / Rsym value: 0.3 / % possible all: 90.2 |
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Processing
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Refinement | Method to determine structure![]() ![]() Starting model: PDB ENTRY 1E0C Resolution: 2.05→30 Å / σ(F): 0
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Refinement step | Cycle: LAST / Resolution: 2.05→30 Å
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Refine LS restraints |
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Xplor file | Serial no: 1 / Param file: PARAM19X.PRO |